RNA–Protein interactions for RNA: ENST00000470606.5

GTF3A-206, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 1,919 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-206ENST00000470606 BRINP2Q9C0B6 783 aa8.03□□□□□ -1.12
GTF3A-206ENST00000470606 PCED1AQ9H1Q7 454 aa8.03□□□□□ -1.12
GTF3A-206ENST00000470606 DUSP15Q9H1R2 295 aaPredicted RBP8.03□□□□□ -1.12
GTF3A-206ENST00000470606 MVB12BQ9H7P6 319 aa8.03□□□□□ -1.12
GTF3A-206ENST00000470606 SLC40A1Q9NP59 571 aa8.03□□□□□ -1.12
GTF3A-206ENST00000470606 TMEM74BQ9NUR3 256 aa8.03□□□□□ -1.12
GTF3A-206ENST00000470606 SPATA6Q9NWH7 488 aaPredicted RBP8.03□□□□□ -1.12
GTF3A-206ENST00000470606 GPRC5BQ9NZH0 403 aa8.03□□□□□ -1.12
GTF3A-206ENST00000470606 BAIAP2L1Q9UHR4 511 aa8.03□□□□□ -1.12
GTF3A-206ENST00000470606 SCN3AQ9NY46 2000 aa8.02□□□□□ -1.12
GTF3A-206ENST00000470606 ASPDHA6ND91 283 aa8.02□□□□□ -1.13
GTF3A-206ENST00000470606 A8MUI8 341 aa8.02□□□□□ -1.13
GTF3A-206ENST00000470606 H7BY64 318 aa8.02□□□□□ -1.13
GTF3A-206ENST00000470606 TLR4O00206 839 aa8.02□□□□□ -1.13
GTF3A-206ENST00000470606 BTN3A3O00478 584 aa8.02□□□□□ -1.13
GTF3A-206ENST00000470606 CLGNO14967 610 aa8.02□□□□□ -1.13
GTF3A-206ENST00000470606 SLC22A2O15244 555 aa8.02□□□□□ -1.13
GTF3A-206ENST00000470606 GSC2O15499 205 aa8.02□□□□□ -1.13
GTF3A-206ENST00000470606 VPS4BO75351 444 aa8.02□□□□□ -1.13
GTF3A-206ENST00000470606 ATP5HO75947 161 aa8.02□□□□□ -1.13
GTF3A-206ENST00000470606 SORBS2O94875 1100 aaKnown RBP8.02□□□□□ -1.13
GTF3A-206ENST00000470606 KLHL18O94889 574 aa8.02□□□□□ -1.13
GTF3A-206ENST00000470606 KRT6AP02538 564 aa8.02□□□□□ -1.13
GTF3A-206ENST00000470606 CSF2P04141 144 aa8.02□□□□□ -1.13
GTF3A-206ENST00000470606 KRT6BP04259 564 aa8.02□□□□□ -1.13
GTF3A-206ENST00000470606 RPN2P04844 631 aa8.02□□□□□ -1.13
GTF3A-206ENST00000470606 C1GALT1C1LP0DN25 315 aa8.02□□□□□ -1.13
GTF3A-206ENST00000470606 SLC2A4P14672 509 aa8.02□□□□□ -1.13
GTF3A-206ENST00000470606 NME1P15531 152 aaKnown RBP8.02□□□□□ -1.13
GTF3A-206ENST00000470606 NQO1P15559 274 aaKnown RBP8.02□□□□□ -1.13
GTF3A-206ENST00000470606 JUNDP17535 347 aa8.02□□□□□ -1.13
GTF3A-206ENST00000470606 ITGAXP20702 1163 aa8.02□□□□□ -1.13
GTF3A-206ENST00000470606 CAPN3P20807 821 aa8.02□□□□□ -1.13
GTF3A-206ENST00000470606 PRDX6P30041 224 aa8.02□□□□□ -1.13
GTF3A-206ENST00000470606 ADSLP30566 484 aaPredicted RBP8.02□□□□□ -1.13
GTF3A-206ENST00000470606 HNF4AP41235 474 aa8.02□□□□□ -1.13
GTF3A-206ENST00000470606 DPP6P42658 865 aa8.02□□□□□ -1.13
GTF3A-206ENST00000470606 KRT6CP48668 564 aa8.02□□□□□ -1.13
GTF3A-206ENST00000470606 MRPL19P49406 292 aaKnown RBP8.02□□□□□ -1.13
GTF3A-206ENST00000470606 ATP4BP51164 291 aa8.02□□□□□ -1.13
GTF3A-206ENST00000470606 RPL38P63173 70 aaKnown RBP8.02□□□□□ -1.13
GTF3A-206ENST00000470606 UBE2IP63279 158 aaKnown RBP8.02□□□□□ -1.13
GTF3A-206ENST00000470606 BNC1Q01954 994 aa8.02□□□□□ -1.13
GTF3A-206ENST00000470606 EMX2Q04743 252 aa8.02□□□□□ -1.13
GTF3A-206ENST00000470606 ILF3Q12906 894 aaKnown RBP eCLIP8.02□□□□□ -1.13
GTF3A-206ENST00000470606 DDX39BQ13838 428 aaKnown RBP8.02□□□□□ -1.13
GTF3A-206ENST00000470606 GPR18Q14330 331 aa8.02□□□□□ -1.13
GTF3A-206ENST00000470606 ZNF423Q2M1K9 1284 aa8.02□□□□□ -1.13
GTF3A-206ENST00000470606 ATP6AP1LQ52LC2 224 aa8.02□□□□□ -1.13
GTF3A-206ENST00000470606 USP39Q53GS9 565 aaKnown RBP8.02□□□□□ -1.13
GTF3A-206ENST00000470606 PRRT3Q5FWE3 981 aa8.02□□□□□ -1.13
GTF3A-206ENST00000470606 THEMIS2Q5TEJ8 643 aa8.02□□□□□ -1.13
GTF3A-206ENST00000470606 IL23RQ5VWK5 629 aa8.02□□□□□ -1.13
GTF3A-206ENST00000470606 ADGRF3Q8IZF5 1079 aa8.02□□□□□ -1.13
GTF3A-206ENST00000470606 CHCHD4Q8N4Q1 142 aa8.02□□□□□ -1.13
GTF3A-206ENST00000470606 FBXL6Q8N531 539 aa8.02□□□□□ -1.13
GTF3A-206ENST00000470606 ANKRD53Q8N9V6 530 aa8.02□□□□□ -1.13
GTF3A-206ENST00000470606 ABHD11Q8NFV4 315 aa8.02□□□□□ -1.13
GTF3A-206ENST00000470606 OR4E2Q8NGC2 313 aa8.02□□□□□ -1.13
GTF3A-206ENST00000470606 OR2L8Q8NGY9 312 aa8.02□□□□□ -1.13
GTF3A-206ENST00000470606 SLC37A2Q8TED4 501 aa8.02□□□□□ -1.13
GTF3A-206ENST00000470606 SETD7Q8WTS6 366 aaKnown RBP8.02□□□□□ -1.13
GTF3A-206ENST00000470606 RCN3Q96D15 328 aa8.02□□□□□ -1.13
GTF3A-206ENST00000470606 CLPTM1LQ96KA5 538 aa8.02□□□□□ -1.13
GTF3A-206ENST00000470606 PRAP1Q96NZ9 151 aa8.02□□□□□ -1.13
GTF3A-206ENST00000470606 NPAS2Q99743 824 aa8.02□□□□□ -1.13
GTF3A-206ENST00000470606 CCT7Q99832 543 aa8.02□□□□□ -1.13
GTF3A-206ENST00000470606 ELOVL6Q9H5J4 265 aa8.02□□□□□ -1.13
GTF3A-206ENST00000470606 KIR3DX1Q9H7L2 352 aa8.02□□□□□ -1.13
GTF3A-206ENST00000470606 SPATA7Q9P0W8 599 aa8.02□□□□□ -1.13
GTF3A-206ENST00000470606 SNX6Q9UNH7 406 aa8.02□□□□□ -1.13
GTF3A-206ENST00000470606 KLHL20Q9Y2M5 609 aa8.02□□□□□ -1.13
GTF3A-206ENST00000470606 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.02□□□□□ -1.13
GTF3A-206ENST00000470606 SERTM1A2A2V5 107 aa8.01□□□□□ -1.13
GTF3A-206ENST00000470606 NPIPB8E9PQR5 432 aa8.01□□□□□ -1.13
GTF3A-206ENST00000470606 AIM2O14862 343 aa8.01□□□□□ -1.13
GTF3A-206ENST00000470606 LCMT2O60294 686 aaKnown RBP8.01□□□□□ -1.13
GTF3A-206ENST00000470606 IDO1P14902 403 aa8.01□□□□□ -1.13
GTF3A-206ENST00000470606 PRPH2P23942 346 aa8.01□□□□□ -1.13
GTF3A-206ENST00000470606 ACADVLP49748 655 aa8.01□□□□□ -1.13
GTF3A-206ENST00000470606 NXPH1P58417 271 aa8.01□□□□□ -1.13
GTF3A-206ENST00000470606 TBL3Q12788 808 aaKnown RBP8.01□□□□□ -1.13
GTF3A-206ENST00000470606 ICE2Q659A1 982 aa8.01□□□□□ -1.13
GTF3A-206ENST00000470606 SPATA19Q7Z5L4 167 aa8.01□□□□□ -1.13
GTF3A-206ENST00000470606 IQCHQ86VS3 1027 aa8.01□□□□□ -1.13
GTF3A-206ENST00000470606 ZNF761Q86XN6 746 aaPredicted RBP8.01□□□□□ -1.13
GTF3A-206ENST00000470606 PLD3Q8IV08 490 aa8.01□□□□□ -1.13
GTF3A-206ENST00000470606 LAS2Q8IYD9 372 aa8.01□□□□□ -1.13
GTF3A-206ENST00000470606 EFCAB3Q8N7B9 438 aa8.01□□□□□ -1.13
GTF3A-206ENST00000470606 OR4K1Q8NGD4 311 aa8.01□□□□□ -1.13
GTF3A-206ENST00000470606 RP9Q8TA86 221 aaKnown RBP8.01□□□□□ -1.13
GTF3A-206ENST00000470606 SMPDL3AQ92484 453 aa8.01□□□□□ -1.13
GTF3A-206ENST00000470606 CMTM5Q96DZ9 223 aa8.01□□□□□ -1.13
GTF3A-206ENST00000470606 EGLN2Q96KS0 407 aa8.01□□□□□ -1.13
GTF3A-206ENST00000470606 PPM1MQ96MI6 270 aa8.01□□□□□ -1.13
GTF3A-206ENST00000470606 MRPL1Q9BYD6 325 aaKnown RBP8.01□□□□□ -1.13
GTF3A-206ENST00000470606 AICDAQ9GZX7 198 aa8.01□□□□□ -1.13
GTF3A-206ENST00000470606 EHD1Q9H4M9 534 aa8.01□□□□□ -1.13
GTF3A-206ENST00000470606 LRTM1Q9HBL6 345 aa8.01□□□□□ -1.13
GTF3A-206ENST00000470606 SLC6A20Q9NP91 592 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms