RNA–Protein interactions for RNA: ENST00000470094.1

BRCA2-202, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 5

Gene BRCA2, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-202ENST00000470094 CTU2Q2VPK5 515 aaKnown RBP3.41□□□□□ -1.86
BRCA2-202ENST00000470094 SLC10A5Q5PT55 438 aa3.41□□□□□ -1.86
BRCA2-202ENST00000470094 WLSQ5T9L3 541 aa3.41□□□□□ -1.86
BRCA2-202ENST00000470094 SUSD1Q6UWL2 747 aa3.41□□□□□ -1.86
BRCA2-202ENST00000470094 DET1Q7L5Y6 550 aa3.41□□□□□ -1.86
BRCA2-202ENST00000470094 CENPVQ7Z7K6 275 aaPredicted RBP3.41□□□□□ -1.86
BRCA2-202ENST00000470094 IQCHQ86VS3 1027 aa3.41□□□□□ -1.86
BRCA2-202ENST00000470094 METTL23Q86XA0 190 aa3.41□□□□□ -1.86
BRCA2-202ENST00000470094 SNX32Q86XE0 403 aa3.41□□□□□ -1.86
BRCA2-202ENST00000470094 LGI2Q8N0V4 545 aa3.41□□□□□ -1.86
BRCA2-202ENST00000470094 NDUFAF2Q8N183 169 aa3.41□□□□□ -1.86
BRCA2-202ENST00000470094 PI4KAP1Q8N8J0 262 aa3.41□□□□□ -1.86
BRCA2-202ENST00000470094 GOT1L1Q8NHS2 421 aaPredicted RBP3.41□□□□□ -1.86
BRCA2-202ENST00000470094 DEPDC1BQ8WUY9 529 aa3.41□□□□□ -1.86
BRCA2-202ENST00000470094 PIGBQ92521 554 aa3.41□□□□□ -1.86
BRCA2-202ENST00000470094 SECISBP2LQ93073 1101 aaKnown RBP3.41□□□□□ -1.86
BRCA2-202ENST00000470094 AZIN2Q96A70 460 aa3.41□□□□□ -1.86
BRCA2-202ENST00000470094 HDAC11Q96DB2 347 aa3.41□□□□□ -1.86
BRCA2-202ENST00000470094 ARSGQ96EG1 525 aa3.41□□□□□ -1.86
BRCA2-202ENST00000470094 AGAP3Q96P47 875 aa3.41□□□□□ -1.86
BRCA2-202ENST00000470094 GBP5Q96PP8 586 aa3.41□□□□□ -1.86
BRCA2-202ENST00000470094 IWS1Q96ST2 819 aa3.41□□□□□ -1.86
BRCA2-202ENST00000470094 GPATCH1Q9BRR8 931 aaKnown RBP3.41□□□□□ -1.86
BRCA2-202ENST00000470094 DGCR6LQ9BY27 220 aa3.41□□□□□ -1.86
BRCA2-202ENST00000470094 MTMR12Q9C0I1 747 aa3.41□□□□□ -1.86
BRCA2-202ENST00000470094 GPR88Q9GZN0 384 aa3.41□□□□□ -1.86
BRCA2-202ENST00000470094 CHST11Q9NPF2 352 aa3.41□□□□□ -1.86
BRCA2-202ENST00000470094 ERAP1Q9NZ08 941 aa3.41□□□□□ -1.86
BRCA2-202ENST00000470094 MAN1B1Q9UKM7 699 aa3.41□□□□□ -1.86
BRCA2-202ENST00000470094 GTF3C4Q9UKN8 822 aa3.41□□□□□ -1.86
BRCA2-202ENST00000470094 PPP1R3CQ9UQK1 317 aa3.41□□□□□ -1.86
BRCA2-202ENST00000470094 PPP2R2CQ9Y2T4 447 aa3.41□□□□□ -1.86
BRCA2-202ENST00000470094 IGKV3D-20A0A0C4DH25 116 aa3.4□□□□□ -1.87
BRCA2-202ENST00000470094 DDHD2O94830 711 aa3.4□□□□□ -1.87
BRCA2-202ENST00000470094 DUS4LO95620 317 aaKnown RBP3.4□□□□□ -1.87
BRCA2-202ENST00000470094 ATP5BP06576 529 aaKnown RBP3.4□□□□□ -1.87
BRCA2-202ENST00000470094 IRF2P14316 349 aa3.4□□□□□ -1.87
BRCA2-202ENST00000470094 FDPSP14324 419 aaKnown RBP3.4□□□□□ -1.87
BRCA2-202ENST00000470094 OAS2P29728 719 aaKnown RBP3.4□□□□□ -1.87
BRCA2-202ENST00000470094 TLX1P31314 330 aaPredicted RBP3.4□□□□□ -1.87
BRCA2-202ENST00000470094 PTGER4P35408 488 aa3.4□□□□□ -1.87
BRCA2-202ENST00000470094 LHX1P48742 406 aa3.4□□□□□ -1.87
BRCA2-202ENST00000470094 TAF6P49848 677 aa3.4□□□□□ -1.87
BRCA2-202ENST00000470094 NPY4RP50391 375 aa3.4□□□□□ -1.87
BRCA2-202ENST00000470094 ASCL1P50553 236 aa3.4□□□□□ -1.87
BRCA2-202ENST00000470094 LBX1P52954 281 aa3.4□□□□□ -1.87
BRCA2-202ENST00000470094 ITGA7Q13683 1181 aa3.4□□□□□ -1.87
BRCA2-202ENST00000470094 VEZF1Q14119 521 aa3.4□□□□□ -1.87
BRCA2-202ENST00000470094 VWC2Q2TAL6 325 aa3.4□□□□□ -1.87
BRCA2-202ENST00000470094 KRT39Q6A163 491 aa3.4□□□□□ -1.87
BRCA2-202ENST00000470094 ZNF613Q6PF04 617 aa3.4□□□□□ -1.87
BRCA2-202ENST00000470094 METTL7BQ6UX53 244 aa3.4□□□□□ -1.87
BRCA2-202ENST00000470094 ZBTB49Q6ZSB9 765 aa3.4□□□□□ -1.87
BRCA2-202ENST00000470094 ERN2Q76MJ5 926 aaKnown RBP3.4□□□□□ -1.87
BRCA2-202ENST00000470094 GTSCR1Q86UQ5 136 aa3.4□□□□□ -1.87
BRCA2-202ENST00000470094 ZNF440Q8IYI8 595 aa3.4□□□□□ -1.87
BRCA2-202ENST00000470094 BMPERQ8N8U9 685 aa3.4□□□□□ -1.87
BRCA2-202ENST00000470094 OR4K1Q8NGD4 311 aa3.4□□□□□ -1.87
BRCA2-202ENST00000470094 SMAP2Q8WU79 429 aaPredicted RBP3.4□□□□□ -1.87
BRCA2-202ENST00000470094 FAM162AQ96A26 154 aa3.4□□□□□ -1.87
BRCA2-202ENST00000470094 LINC00615Q96LM1 132 aaPredicted RBP3.4□□□□□ -1.87
BRCA2-202ENST00000470094 SPAG5Q96R06 1193 aa3.4□□□□□ -1.87
BRCA2-202ENST00000470094 USP28Q96RU2 1077 aa3.4□□□□□ -1.87
BRCA2-202ENST00000470094 KRT12Q99456 494 aa3.4□□□□□ -1.87
BRCA2-202ENST00000470094 PRRG4Q9BZD6 226 aa3.4□□□□□ -1.87
BRCA2-202ENST00000470094 C2orf40Q9H1Z8 148 aa3.4□□□□□ -1.87
BRCA2-202ENST00000470094 XAB2Q9HCS7 855 aaKnown RBP3.4□□□□□ -1.87
BRCA2-202ENST00000470094 PFDN4Q9NQP4 134 aa3.4□□□□□ -1.87
BRCA2-202ENST00000470094 RNF150Q9ULK6 438 aa3.4□□□□□ -1.87
BRCA2-202ENST00000470094 ANGPTL3Q9Y5C1 460 aa3.4□□□□□ -1.87
BRCA2-202ENST00000470094 KRTAP16-1A8MUX0 517 aa3.39□□□□□ -1.87
BRCA2-202ENST00000470094 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.39□□□□□ -1.87
BRCA2-202ENST00000470094 CCDC188H7C350 402 aa3.39□□□□□ -1.87
BRCA2-202ENST00000470094 O00370 1275 aa3.39□□□□□ -1.87
BRCA2-202ENST00000470094 SPRY1O43609 319 aaPredicted RBP3.39□□□□□ -1.87
BRCA2-202ENST00000470094 MAGEC1O60732 1142 aa3.39□□□□□ -1.87
BRCA2-202ENST00000470094 DIAPH2O60879 1101 aa3.39□□□□□ -1.87
BRCA2-202ENST00000470094 SORBS2O94875 1100 aaKnown RBP3.39□□□□□ -1.87
BRCA2-202ENST00000470094 MOCS3O95396 460 aa3.39□□□□□ -1.87
BRCA2-202ENST00000470094 SEC24AO95486 1093 aa3.39□□□□□ -1.87
BRCA2-202ENST00000470094 SLC2A2P11168 524 aaPredicted RBP3.39□□□□□ -1.87
BRCA2-202ENST00000470094 ERCC2P18074 760 aa3.39□□□□□ -1.87
BRCA2-202ENST00000470094 LHCGRP22888 699 aa3.39□□□□□ -1.87
BRCA2-202ENST00000470094 EEF1B2P24534 225 aaKnown RBP3.39□□□□□ -1.87
BRCA2-202ENST00000470094 ATP5DP30049 168 aa3.39□□□□□ -1.87
BRCA2-202ENST00000470094 KRT2P35908 639 aa3.39□□□□□ -1.87
BRCA2-202ENST00000470094 MMP12P39900 470 aa3.39□□□□□ -1.87
BRCA2-202ENST00000470094 LEPRP48357 1165 aaKnown RBP3.39□□□□□ -1.87
BRCA2-202ENST00000470094 RAB28P51157 221 aa3.39□□□□□ -1.87
BRCA2-202ENST00000470094 DRP2Q13474 957 aa3.39□□□□□ -1.87
BRCA2-202ENST00000470094 CDC37Q16543 378 aaPredicted RBP3.39□□□□□ -1.87
BRCA2-202ENST00000470094 ARMC4Q5T2S8 1044 aa3.39□□□□□ -1.87
BRCA2-202ENST00000470094 UGT3A1Q6NUS8 523 aa3.39□□□□□ -1.87
BRCA2-202ENST00000470094 CAVIN1Q6NZI2 390 aaKnown RBP3.39□□□□□ -1.87
BRCA2-202ENST00000470094 SLC25A47Q6Q0C1 308 aa3.39□□□□□ -1.87
BRCA2-202ENST00000470094 PET117Q6UWS5 81 aa3.39□□□□□ -1.87
BRCA2-202ENST00000470094 BTN2A1Q7KYR7 527 aa3.39□□□□□ -1.87
BRCA2-202ENST00000470094 GLRX5Q86SX6 157 aa3.39□□□□□ -1.87
BRCA2-202ENST00000470094 IQCA1Q86XH1 822 aa3.39□□□□□ -1.87
BRCA2-202ENST00000470094 ZNF713Q8N859 430 aaPredicted RBP3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms