RNA–Protein interactions for RNA: ENST00000468602.5

MSH5-214, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-214ENST00000468602 ZNF382Q96SR6 550 aa10.85□□□□□ -0.67
MSH5-214ENST00000468602 PLCD4Q9BRC7 762 aa10.85□□□□□ -0.67
MSH5-214ENST00000468602 EFCAB11Q9BUY7 163 aa10.85□□□□□ -0.67
MSH5-214ENST00000468602 GATA5Q9BWX5 397 aaPredicted RBP10.85□□□□□ -0.67
MSH5-214ENST00000468602 DRC3Q9H069 523 aa10.85□□□□□ -0.67
MSH5-214ENST00000468602 ATG10Q9H0Y0 220 aa10.85□□□□□ -0.67
MSH5-214ENST00000468602 C12orf65Q9H3J6 166 aaKnown RBP10.85□□□□□ -0.67
MSH5-214ENST00000468602 CCDC134Q9H6E4 229 aa10.85□□□□□ -0.67
MSH5-214ENST00000468602 KCNK9Q9NPC2 374 aa10.85□□□□□ -0.67
MSH5-214ENST00000468602 PILRAQ9UKJ1 303 aa10.85□□□□□ -0.67
MSH5-214ENST00000468602 SNX7Q9UNH6 387 aa10.85□□□□□ -0.67
MSH5-214ENST00000468602 APOBEC2Q9Y235 224 aaKnown RBP10.85□□□□□ -0.67
MSH5-214ENST00000468602 DMXL1Q9Y485 3027 aa10.84□□□□□ -0.67
MSH5-214ENST00000468602 IGHV5-10-1A0A0J9YXX1 117 aa10.84□□□□□ -0.67
MSH5-214ENST00000468602 KRT87PA6NCN2 255 aa10.84□□□□□ -0.67
MSH5-214ENST00000468602 NCF1BA6NI72 391 aaPredicted RBP10.84□□□□□ -0.67
MSH5-214ENST00000468602 NCF1CA8MVU1 366 aaPredicted RBP10.84□□□□□ -0.67
MSH5-214ENST00000468602 KCNK5O95279 499 aa10.84□□□□□ -0.67
MSH5-214ENST00000468602 SIX3O95343 332 aaPredicted RBP10.84□□□□□ -0.67
MSH5-214ENST00000468602 ZBTB11O95625 1053 aaPredicted RBP10.84□□□□□ -0.67
MSH5-214ENST00000468602 MYF5P13349 255 aa10.84□□□□□ -0.67
MSH5-214ENST00000468602 NCF1P14598 390 aaPredicted RBP10.84□□□□□ -0.67
MSH5-214ENST00000468602 EZRP15311 586 aaKnown RBP10.84□□□□□ -0.67
MSH5-214ENST00000468602 POLR2CP19387 275 aaPredicted RBP10.84□□□□□ -0.67
MSH5-214ENST00000468602 CXCR2P25025 360 aa10.84□□□□□ -0.67
MSH5-214ENST00000468602 HNF4AP41235 474 aa10.84□□□□□ -0.67
MSH5-214ENST00000468602 GDF5P43026 501 aa10.84□□□□□ -0.67
MSH5-214ENST00000468602 LSSP48449 732 aa10.84□□□□□ -0.67
MSH5-214ENST00000468602 PDX1P52945 283 aa10.84□□□□□ -0.67
MSH5-214ENST00000468602 INSM1Q01101 510 aaPredicted RBP10.84□□□□□ -0.67
MSH5-214ENST00000468602 CLCQ05315 142 aa10.84□□□□□ -0.67
MSH5-214ENST00000468602 LCP2Q13094 533 aa10.84□□□□□ -0.67
MSH5-214ENST00000468602 TRAF3Q13114 568 aa10.84□□□□□ -0.67
MSH5-214ENST00000468602 LAPTM5Q13571 262 aa10.84□□□□□ -0.67
MSH5-214ENST00000468602 GTF2H2Q13888 395 aa10.84□□□□□ -0.67
MSH5-214ENST00000468602 C18orf21Q32NC0 220 aaPredicted RBP10.84□□□□□ -0.67
MSH5-214ENST00000468602 KIAA1614Q5VZ46 1190 aa10.84□□□□□ -0.67
MSH5-214ENST00000468602 ARMC6Q6NXE6 501 aa10.84□□□□□ -0.67
MSH5-214ENST00000468602 GTF2H2CQ6P1K8 395 aa10.84□□□□□ -0.67
MSH5-214ENST00000468602 NXPE4Q6UWF7 544 aa10.84□□□□□ -0.67
MSH5-214ENST00000468602 RNF44Q7L0R7 432 aa10.84□□□□□ -0.67
MSH5-214ENST00000468602 TMPRSS9Q7Z410 1059 aa10.84□□□□□ -0.67
MSH5-214ENST00000468602 GOLGA7Q7Z5G4 137 aa10.84□□□□□ -0.67
MSH5-214ENST00000468602 SLCO6A1Q86UG4 719 aa10.84□□□□□ -0.67
MSH5-214ENST00000468602 BPHLQ86WA6 291 aaPredicted RBP10.84□□□□□ -0.67
MSH5-214ENST00000468602 PAQR7Q86WK9 346 aa10.84□□□□□ -0.67
MSH5-214ENST00000468602 TMPRSS12Q86WS5 348 aa10.84□□□□□ -0.67
MSH5-214ENST00000468602 ZNF761Q86XN6 746 aaPredicted RBP10.84□□□□□ -0.67
MSH5-214ENST00000468602 NUDCD3Q8IVD9 361 aa10.84□□□□□ -0.67
MSH5-214ENST00000468602 LAS2Q8IYD9 372 aa10.84□□□□□ -0.67
MSH5-214ENST00000468602 ADAMTS14Q8WXS8 1223 aa10.84□□□□□ -0.67
MSH5-214ENST00000468602 NEIL2Q969S2 332 aa10.84□□□□□ -0.67
MSH5-214ENST00000468602 PHF21BQ96EK2 531 aa10.84□□□□□ -0.67
MSH5-214ENST00000468602 TCTN2Q96GX1 697 aa10.84□□□□□ -0.67
MSH5-214ENST00000468602 LIN37Q96GY3 246 aaPredicted RBP10.84□□□□□ -0.67
MSH5-214ENST00000468602 TRAPPC9Q96Q05 1148 aa10.84□□□□□ -0.67
MSH5-214ENST00000468602 NRTNQ99748 197 aa10.84□□□□□ -0.67
MSH5-214ENST00000468602 MRPS30Q9NP92 439 aaKnown RBP10.84□□□□□ -0.67
MSH5-214ENST00000468602 TAC3Q9UHF0 121 aa10.84□□□□□ -0.67
MSH5-214ENST00000468602 TRPS1Q9UHF7 1281 aa10.84□□□□□ -0.67
MSH5-214ENST00000468602 TSR3Q9UJK0 312 aaKnown RBP10.84□□□□□ -0.67
MSH5-214ENST00000468602 CDV3Q9UKY7 258 aaKnown RBP10.84□□□□□ -0.67
MSH5-214ENST00000468602 ISM1B1AKI9 464 aa10.83□□□□□ -0.68
MSH5-214ENST00000468602 NPIPB8E9PQR5 432 aa10.83□□□□□ -0.68
MSH5-214ENST00000468602 H0YIV9 168 aa10.83□□□□□ -0.68
MSH5-214ENST00000468602 OR7A17O14581 309 aa10.83□□□□□ -0.68
MSH5-214ENST00000468602 SRPX2O60687 465 aaPredicted RBP10.83□□□□□ -0.68
MSH5-214ENST00000468602 PRAMEF4O60810 478 aa10.83□□□□□ -0.68
MSH5-214ENST00000468602 WDR47O94967 919 aa10.83□□□□□ -0.68
MSH5-214ENST00000468602 ESRRBO95718 433 aa10.83□□□□□ -0.68
MSH5-214ENST00000468602 OTCP00480 354 aa10.83□□□□□ -0.68
MSH5-214ENST00000468602 FTH1P19P0C7X4 201 aa10.83□□□□□ -0.68
MSH5-214ENST00000468602 C1GALT1C1LP0DN25 315 aa10.83□□□□□ -0.68
MSH5-214ENST00000468602 CHN1P15882 459 aa10.83□□□□□ -0.68
MSH5-214ENST00000468602 TYRP1P17643 537 aa10.83□□□□□ -0.68
MSH5-214ENST00000468602 NELFEP18615 380 aaKnown RBP10.83□□□□□ -0.68
MSH5-214ENST00000468602 SERPINB1P30740 379 aa10.83□□□□□ -0.68
MSH5-214ENST00000468602 AHRP35869 848 aa10.83□□□□□ -0.68
MSH5-214ENST00000468602 CCR8P51685 355 aa10.83□□□□□ -0.68
MSH5-214ENST00000468602 ARFIP1P53367 373 aa10.83□□□□□ -0.68
MSH5-214ENST00000468602 NAGLUP54802 743 aa10.83□□□□□ -0.68
MSH5-214ENST00000468602 EMP3P54852 163 aa10.83□□□□□ -0.68
MSH5-214ENST00000468602 CSNK1G2P78368 415 aa10.83□□□□□ -0.68
MSH5-214ENST00000468602 REEP5Q00765 189 aa10.83□□□□□ -0.68
MSH5-214ENST00000468602 EIF3IQ13347 325 aaKnown RBP10.83□□□□□ -0.68
MSH5-214ENST00000468602 SPIDRQ14159 915 aa10.83□□□□□ -0.68
MSH5-214ENST00000468602 RCN2Q14257 317 aa10.83□□□□□ -0.68
MSH5-214ENST00000468602 SF1Q15637 639 aaKnown RBP10.83□□□□□ -0.68
MSH5-214ENST00000468602 MANEAQ5SRI9 462 aa10.83□□□□□ -0.68
MSH5-214ENST00000468602 HHATQ5VTY9 493 aa10.83□□□□□ -0.68
MSH5-214ENST00000468602 PRAMEF9Q5VWM5 478 aa10.83□□□□□ -0.68
MSH5-214ENST00000468602 FCRL6Q6DN72 434 aa10.83□□□□□ -0.68
MSH5-214ENST00000468602 GRHL2Q6ISB3 625 aa10.83□□□□□ -0.68
MSH5-214ENST00000468602 IGF2-ASQ6U949 168 aa10.83□□□□□ -0.68
MSH5-214ENST00000468602 SUSD1Q6UWL2 747 aa10.83□□□□□ -0.68
MSH5-214ENST00000468602 RBM44Q6ZP01 1051 aaKnown RBP10.83□□□□□ -0.68
MSH5-214ENST00000468602 DGLUCYQ7Z3D6 616 aa10.83□□□□□ -0.68
MSH5-214ENST00000468602 LSMEM2Q8N112 164 aa10.83□□□□□ -0.68
MSH5-214ENST00000468602 DNAJC22Q8N4W6 341 aa10.83□□□□□ -0.68
MSH5-214ENST00000468602 CCDC63Q8NA47 563 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms