RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 SRSF5Q13243 272 aaKnown RBP4□□□□□ -1.77
TMEM39A-204ENST00000468545 SP140Q13342 867 aa4□□□□□ -1.77
TMEM39A-204ENST00000468545 NFATC2Q13469 925 aa4□□□□□ -1.77
TMEM39A-204ENST00000468545 NAB1Q13506 487 aa4□□□□□ -1.77
TMEM39A-204ENST00000468545 GTF2H3Q13889 308 aa4□□□□□ -1.77
TMEM39A-204ENST00000468545 FGL2Q14314 439 aa4□□□□□ -1.77
TMEM39A-204ENST00000468545 FRG1Q14331 258 aaKnown RBP4□□□□□ -1.77
TMEM39A-204ENST00000468545 ICAM4Q14773 271 aa4□□□□□ -1.77
TMEM39A-204ENST00000468545 IRF4Q15306 451 aa4□□□□□ -1.77
TMEM39A-204ENST00000468545 C3orf36Q3SXR2 165 aa4□□□□□ -1.77
TMEM39A-204ENST00000468545 GPR33Q49SQ1 333 aa4□□□□□ -1.77
TMEM39A-204ENST00000468545 AARS2Q5JTZ9 985 aaKnown RBP4□□□□□ -1.77
TMEM39A-204ENST00000468545 GPRC6AQ5T6X5 926 aa4□□□□□ -1.77
TMEM39A-204ENST00000468545 HENMT1Q5T8I9 393 aaKnown RBP4□□□□□ -1.77
TMEM39A-204ENST00000468545 AGBL2Q5U5Z8 902 aa4□□□□□ -1.77
TMEM39A-204ENST00000468545 ARMC3Q5W041 872 aa4□□□□□ -1.77
TMEM39A-204ENST00000468545 KIAA0895LQ68EN5 471 aa4□□□□□ -1.77
TMEM39A-204ENST00000468545 KIAA1161Q6NSJ0 714 aa4□□□□□ -1.77
TMEM39A-204ENST00000468545 PNCKQ6P2M8 343 aa4□□□□□ -1.77
TMEM39A-204ENST00000468545 ZNF549Q6P9A3 640 aa4□□□□□ -1.77
TMEM39A-204ENST00000468545 TMEM220Q6QAJ8 160 aa4□□□□□ -1.77
TMEM39A-204ENST00000468545 ENPP7Q6UWV6 458 aa4□□□□□ -1.77
TMEM39A-204ENST00000468545 CERS6Q6ZMG9 384 aa4□□□□□ -1.77
TMEM39A-204ENST00000468545 DOK3Q7L591 496 aa4□□□□□ -1.77
TMEM39A-204ENST00000468545 RD3Q7Z3Z2 195 aa4□□□□□ -1.77
TMEM39A-204ENST00000468545 CMC1Q7Z7K0 106 aa4□□□□□ -1.77
TMEM39A-204ENST00000468545 EXOC3L1Q86VI1 746 aa4□□□□□ -1.77
TMEM39A-204ENST00000468545 ZC3HC1Q86WB0 502 aaKnown RBP4□□□□□ -1.77
TMEM39A-204ENST00000468545 LMNTD2Q8IXW0 634 aa4□□□□□ -1.77
TMEM39A-204ENST00000468545 D2HGDHQ8N465 521 aa4□□□□□ -1.77
TMEM39A-204ENST00000468545 CAMKK1Q8N5S9 505 aa4□□□□□ -1.77
TMEM39A-204ENST00000468545 CLDN19Q8N6F1 224 aa4□□□□□ -1.77
TMEM39A-204ENST00000468545 TMEM105Q8N8V8 129 aa4□□□□□ -1.77
TMEM39A-204ENST00000468545 ANKRD42Q8N9B4 389 aa4□□□□□ -1.77
TMEM39A-204ENST00000468545 CCDC63Q8NA47 563 aa4□□□□□ -1.77
TMEM39A-204ENST00000468545 SIDT2Q8NBJ9 832 aaKnown RBP4□□□□□ -1.77
TMEM39A-204ENST00000468545 GPR150Q8NGU9 434 aa4□□□□□ -1.77
TMEM39A-204ENST00000468545 OR2T34Q8NGX1 318 aa4□□□□□ -1.77
TMEM39A-204ENST00000468545 MDM1Q8TC05 714 aa4□□□□□ -1.77
TMEM39A-204ENST00000468545 Q8TCH9 128 aa4□□□□□ -1.77
TMEM39A-204ENST00000468545 MGARPQ8TDB4 240 aa4□□□□□ -1.77
TMEM39A-204ENST00000468545 PEX13Q92968 403 aa4□□□□□ -1.77
TMEM39A-204ENST00000468545 ULK4Q96C45 1275 aa4□□□□□ -1.77
TMEM39A-204ENST00000468545 SGF29Q96ES7 293 aa4□□□□□ -1.77
TMEM39A-204ENST00000468545 HIC2Q96JB3 615 aa4□□□□□ -1.77
TMEM39A-204ENST00000468545 LOXL4Q96JB6 756 aa4□□□□□ -1.77
TMEM39A-204ENST00000468545 VPS39Q96JC1 886 aa4□□□□□ -1.77
TMEM39A-204ENST00000468545 SERAC1Q96JX3 654 aa4□□□□□ -1.77
TMEM39A-204ENST00000468545 ATP6V1G3Q96LB4 118 aa4□□□□□ -1.77
TMEM39A-204ENST00000468545 TSNARE1Q96NA8 513 aa4□□□□□ -1.77
TMEM39A-204ENST00000468545 PLEKHG4BQ96PX9 1271 aa4□□□□□ -1.77
TMEM39A-204ENST00000468545 SMC6Q96SB8 1091 aa4□□□□□ -1.77
TMEM39A-204ENST00000468545 COPS8Q99627 209 aa4□□□□□ -1.77
TMEM39A-204ENST00000468545 OLFM1Q99784 485 aa4□□□□□ -1.77
TMEM39A-204ENST00000468545 ZSCAN5AQ9BUG6 496 aa4□□□□□ -1.77
TMEM39A-204ENST00000468545 APOOQ9BUR5 198 aa4□□□□□ -1.77
TMEM39A-204ENST00000468545 TMEM109Q9BVC6 243 aa4□□□□□ -1.77
TMEM39A-204ENST00000468545 C1QTNF7Q9BXJ2 289 aa4□□□□□ -1.77
TMEM39A-204ENST00000468545 CLPBQ9H078 707 aa4□□□□□ -1.77
TMEM39A-204ENST00000468545 STMN4Q9H169 189 aaPredicted RBP4□□□□□ -1.77
TMEM39A-204ENST00000468545 OR2AG1Q9H205 316 aa4□□□□□ -1.77
TMEM39A-204ENST00000468545 RHOJQ9H4E5 214 aa4□□□□□ -1.77
TMEM39A-204ENST00000468545 EBF2Q9HAK2 575 aa4□□□□□ -1.77
TMEM39A-204ENST00000468545 PREBQ9HCU5 417 aa4□□□□□ -1.77
TMEM39A-204ENST00000468545 MLXIPLQ9NP71 852 aa4□□□□□ -1.77
TMEM39A-204ENST00000468545 TMEM140Q9NV12 185 aa4□□□□□ -1.77
TMEM39A-204ENST00000468545 WSB2Q9NYS7 404 aaPredicted RBP4□□□□□ -1.77
TMEM39A-204ENST00000468545 GALPQ9UBC7 116 aa4□□□□□ -1.77
TMEM39A-204ENST00000468545 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4□□□□□ -1.77
TMEM39A-204ENST00000468545 ZNHIT2Q9UHR6 403 aa4□□□□□ -1.77
TMEM39A-204ENST00000468545 TLK1Q9UKI8 766 aa4□□□□□ -1.77
TMEM39A-204ENST00000468545 FZD4Q9ULV1 537 aa4□□□□□ -1.77
TMEM39A-204ENST00000468545 RUVBL2Q9Y230 463 aaKnown RBP4□□□□□ -1.77
TMEM39A-204ENST00000468545 OR1A2Q9Y585 309 aa4□□□□□ -1.77
TMEM39A-204ENST00000468545 F5P12259 2224 aa4□□□□□ -1.77
TMEM39A-204ENST00000468545 C5orf42Q9H799 3197 aa4□□□□□ -1.77
TMEM39A-204ENST00000468545 MYLKQ15746 1914 aa3.99□□□□□ -1.77
TMEM39A-204ENST00000468545 MUC22E2RYF6 1773 aaPredicted RBP3.99□□□□□ -1.77
TMEM39A-204ENST00000468545 A0A096LPK6 155 aa3.99□□□□□ -1.77
TMEM39A-204ENST00000468545 WDR91A4D1P6 747 aa3.99□□□□□ -1.77
TMEM39A-204ENST00000468545 POM121BA6NF01 834 aa3.99□□□□□ -1.77
TMEM39A-204ENST00000468545 MEI4A8MW99 385 aa3.99□□□□□ -1.77
TMEM39A-204ENST00000468545 HMGB1P1B2RPK0 211 aaPredicted RBP3.99□□□□□ -1.77
TMEM39A-204ENST00000468545 CACNB4O00305 520 aaPredicted RBP3.99□□□□□ -1.77
TMEM39A-204ENST00000468545 COPEO14579 308 aa3.99□□□□□ -1.77
TMEM39A-204ENST00000468545 PRMT5O14744 637 aaPredicted RBP3.99□□□□□ -1.77
TMEM39A-204ENST00000468545 FOXD2O60548 495 aaPredicted RBP3.99□□□□□ -1.77
TMEM39A-204ENST00000468545 VPS26AO75436 327 aa3.99□□□□□ -1.77
TMEM39A-204ENST00000468545 POP7O75817 140 aaKnown RBP3.99□□□□□ -1.77
TMEM39A-204ENST00000468545 IPO13O94829 963 aaKnown RBP3.99□□□□□ -1.77
TMEM39A-204ENST00000468545 CDK14O94921 469 aa3.99□□□□□ -1.77
TMEM39A-204ENST00000468545 C2P06681 752 aa3.99□□□□□ -1.77
TMEM39A-204ENST00000468545 PYGLP06737 847 aa3.99□□□□□ -1.77
TMEM39A-204ENST00000468545 NEFHP12036 1026 aa3.99□□□□□ -1.77
TMEM39A-204ENST00000468545 ATP1B2P14415 290 aaPredicted RBP3.99□□□□□ -1.77
TMEM39A-204ENST00000468545 BRAFP15056 766 aa3.99□□□□□ -1.77
TMEM39A-204ENST00000468545 ALOX15P16050 662 aaPredicted RBP3.99□□□□□ -1.77
TMEM39A-204ENST00000468545 STMN1P16949 149 aa3.99□□□□□ -1.77
TMEM39A-204ENST00000468545 ZNF8P17098 575 aaPredicted RBP3.99□□□□□ -1.77
TMEM39A-204ENST00000468545 KRT4P19013 534 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms