RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 HSD11B2P80365 405 aa14.61□□□□□ -0.07
NPHP4-205ENST00000466897 TSTA3Q13630 321 aaPredicted RBP14.61□□□□□ -0.07
NPHP4-205ENST00000466897 GTF2H2Q13888 395 aa14.61□□□□□ -0.07
NPHP4-205ENST00000466897 TBCCQ15814 346 aa14.61□□□□□ -0.07
NPHP4-205ENST00000466897 ISXQ2M1V0 245 aa14.61□□□□□ -0.07
NPHP4-205ENST00000466897 HES3Q5TGS1 186 aa14.61□□□□□ -0.07
NPHP4-205ENST00000466897 KIAA1614Q5VZ46 1190 aa14.61□□□□□ -0.07
NPHP4-205ENST00000466897 GTF2H2CQ6P1K8 395 aa14.61□□□□□ -0.07
NPHP4-205ENST00000466897 C10orf107Q8IVU9 208 aa14.61□□□□□ -0.07
NPHP4-205ENST00000466897 GALNT15Q8N3T1 639 aa14.61□□□□□ -0.07
NPHP4-205ENST00000466897 D2HGDHQ8N465 521 aa14.61□□□□□ -0.07
NPHP4-205ENST00000466897 C19orf47Q8N9M1 422 aaKnown RBP14.61□□□□□ -0.07
NPHP4-205ENST00000466897 OR4K1Q8NGD4 311 aa14.61□□□□□ -0.07
NPHP4-205ENST00000466897 SLC5A11Q8WWX8 675 aa14.61□□□□□ -0.07
NPHP4-205ENST00000466897 NEIL2Q969S2 332 aa14.61□□□□□ -0.07
NPHP4-205ENST00000466897 ESAMQ96AP7 390 aa14.61□□□□□ -0.07
NPHP4-205ENST00000466897 TCTN2Q96GX1 697 aa14.61□□□□□ -0.07
NPHP4-205ENST00000466897 LIN37Q96GY3 246 aaPredicted RBP14.61□□□□□ -0.07
NPHP4-205ENST00000466897 PLCD4Q9BRC7 762 aa14.61□□□□□ -0.07
NPHP4-205ENST00000466897 SARGQ9BW04 601 aa14.61□□□□□ -0.07
NPHP4-205ENST00000466897 ACAT2Q9BWD1 397 aa14.61□□□□□ -0.07
NPHP4-205ENST00000466897 PITHD1Q9GZP4 211 aaPredicted RBP14.61□□□□□ -0.07
NPHP4-205ENST00000466897 PELI2Q9HAT8 420 aa14.61□□□□□ -0.07
NPHP4-205ENST00000466897 SLC6A20Q9NP91 592 aa14.61□□□□□ -0.07
NPHP4-205ENST00000466897 TMEM184CQ9NVA4 438 aa14.61□□□□□ -0.07
NPHP4-205ENST00000466897 STK38LQ9Y2H1 464 aa14.61□□□□□ -0.07
NPHP4-205ENST00000466897 DCDC2BA2VCK2 349 aa14.6□□□□□ -0.07
NPHP4-205ENST00000466897 H3BQF6 201 aa14.6□□□□□ -0.07
NPHP4-205ENST00000466897 CLGNO14967 610 aa14.6□□□□□ -0.07
NPHP4-205ENST00000466897 MAP3K7O43318 606 aa14.6□□□□□ -0.07
NPHP4-205ENST00000466897 KIF1CO43896 1103 aaKnown RBP14.6□□□□□ -0.07
NPHP4-205ENST00000466897 EZRP15311 586 aaKnown RBP14.6□□□□□ -0.07
NPHP4-205ENST00000466897 MAGP20916 626 aa14.6□□□□□ -0.07
NPHP4-205ENST00000466897 KCNA4P22459 653 aa14.6□□□□□ -0.07
NPHP4-205ENST00000466897 ALDH3A1P30838 453 aa14.6□□□□□ -0.07
NPHP4-205ENST00000466897 SERPINB5P36952 375 aa14.6□□□□□ -0.07
NPHP4-205ENST00000466897 PPP2R2AP63151 447 aa14.6□□□□□ -0.07
NPHP4-205ENST00000466897 EIF3IQ13347 325 aaKnown RBP14.6□□□□□ -0.07
NPHP4-205ENST00000466897 UNC50Q53HI1 259 aa14.6□□□□□ -0.07
NPHP4-205ENST00000466897 CCDC157Q569K6 752 aa14.6□□□□□ -0.07
NPHP4-205ENST00000466897 FBXO48Q5FWF7 155 aa14.6□□□□□ -0.07
NPHP4-205ENST00000466897 ATG9BQ674R7 924 aa14.6□□□□□ -0.07
NPHP4-205ENST00000466897 FIGLAQ6QHK4 219 aa14.6□□□□□ -0.07
NPHP4-205ENST00000466897 SLCO4C1Q6ZQN7 724 aa14.6□□□□□ -0.07
NPHP4-205ENST00000466897 GOLGA7Q7Z5G4 137 aa14.6□□□□□ -0.07
NPHP4-205ENST00000466897 B3GNT8Q7Z7M8 397 aa14.6□□□□□ -0.07
NPHP4-205ENST00000466897 TRIM73Q86UV7 250 aa14.6□□□□□ -0.07
NPHP4-205ENST00000466897 PAQR7Q86WK9 346 aa14.6□□□□□ -0.07
NPHP4-205ENST00000466897 SNX31Q8N9S9 440 aa14.6□□□□□ -0.07
NPHP4-205ENST00000466897 OR6Y1Q8NGX8 325 aa14.6□□□□□ -0.07
NPHP4-205ENST00000466897 MAGEB10Q96LZ2 347 aaPredicted RBP14.6□□□□□ -0.07
NPHP4-205ENST00000466897 PPM1MQ96MI6 270 aa14.6□□□□□ -0.07
NPHP4-205ENST00000466897 SELENOSQ9BQE4 189 aa14.6□□□□□ -0.07
NPHP4-205ENST00000466897 DPH7Q9BTV6 452 aa14.6□□□□□ -0.07
NPHP4-205ENST00000466897 TRMOQ9BU70 441 aa14.6□□□□□ -0.07
NPHP4-205ENST00000466897 STRADBQ9C0K7 418 aa14.6□□□□□ -0.07
NPHP4-205ENST00000466897 ENAMQ9NRM1 1142 aa14.6□□□□□ -0.07
NPHP4-205ENST00000466897 SH2B3Q9UQQ2 575 aa14.6□□□□□ -0.07
NPHP4-205ENST00000466897 KIF26BQ2KJY2 2108 aa14.6□□□□□ -0.07
NPHP4-205ENST00000466897 LRRC14BA6NHZ5 514 aa14.59□□□□□ -0.07
NPHP4-205ENST00000466897 SLC9B1P1A6NJY1 282 aa14.59□□□□□ -0.07
NPHP4-205ENST00000466897 E7EQ34 232 aa14.59□□□□□ -0.07
NPHP4-205ENST00000466897 CSO75390 466 aaKnown RBP14.59□□□□□ -0.07
NPHP4-205ENST00000466897 WFS1O76024 890 aa14.59□□□□□ -0.07
NPHP4-205ENST00000466897 SUPT7LO94864 414 aa14.59□□□□□ -0.07
NPHP4-205ENST00000466897 MLYCDO95822 493 aa14.59□□□□□ -0.07
NPHP4-205ENST00000466897 CDH1P12830 882 aa14.59□□□□□ -0.07
NPHP4-205ENST00000466897 NR1D1P20393 614 aa14.59□□□□□ -0.07
NPHP4-205ENST00000466897 HPDP32754 393 aaPredicted RBP14.59□□□□□ -0.07
NPHP4-205ENST00000466897 CCR8P51685 355 aa14.59□□□□□ -0.07
NPHP4-205ENST00000466897 NAGLUP54802 743 aa14.59□□□□□ -0.07
NPHP4-205ENST00000466897 WDR4P57081 412 aaKnown RBP14.59□□□□□ -0.07
NPHP4-205ENST00000466897 YBX1P67809 324 aaKnown RBP14.59□□□□□ -0.07
NPHP4-205ENST00000466897 CLCQ05315 142 aa14.59□□□□□ -0.07
NPHP4-205ENST00000466897 GALNT1Q10472 559 aaPredicted RBP14.59□□□□□ -0.07
NPHP4-205ENST00000466897 PHF19Q5T6S3 580 aa14.59□□□□□ -0.07
NPHP4-205ENST00000466897 HHATQ5VTY9 493 aa14.59□□□□□ -0.07
NPHP4-205ENST00000466897 FCRL6Q6DN72 434 aa14.59□□□□□ -0.07
NPHP4-205ENST00000466897 CYB5D1Q6P9G0 228 aa14.59□□□□□ -0.07
NPHP4-205ENST00000466897 NXPE4Q6UWF7 544 aa14.59□□□□□ -0.07
NPHP4-205ENST00000466897 FRMD7Q6ZUT3 714 aa14.59□□□□□ -0.07
NPHP4-205ENST00000466897 RNF44Q7L0R7 432 aa14.59□□□□□ -0.07
NPHP4-205ENST00000466897 TMPRSS7Q7RTY8 843 aa14.59□□□□□ -0.07
NPHP4-205ENST00000466897 ERMP1Q7Z2K6 904 aa14.59□□□□□ -0.07
NPHP4-205ENST00000466897 FAM129CQ86XR2 697 aa14.59□□□□□ -0.07
NPHP4-205ENST00000466897 TEX9Q8N6V9 391 aa14.59□□□□□ -0.07
NPHP4-205ENST00000466897 AGBL5Q8NDL9 886 aa14.59□□□□□ -0.07
NPHP4-205ENST00000466897 PTCD3Q96EY7 689 aaKnown RBP14.59□□□□□ -0.07
NPHP4-205ENST00000466897 EFCAB11Q9BUY7 163 aa14.59□□□□□ -0.07
NPHP4-205ENST00000466897 NTMT1Q9BV86 223 aa14.59□□□□□ -0.07
NPHP4-205ENST00000466897 GSTO2Q9H4Y5 243 aa14.59□□□□□ -0.07
NPHP4-205ENST00000466897 ZBTB26Q9HCK0 441 aa14.59□□□□□ -0.07
NPHP4-205ENST00000466897 PDE7BQ9NP56 450 aa14.59□□□□□ -0.07
NPHP4-205ENST00000466897 CUEDC1Q9NWM3 386 aaPredicted RBP14.59□□□□□ -0.07
NPHP4-205ENST00000466897 AKAP7Q9P0M2 348 aaPredicted RBP14.59□□□□□ -0.07
NPHP4-205ENST00000466897 KLHL3Q9UH77 587 aa14.59□□□□□ -0.07
NPHP4-205ENST00000466897 PILRAQ9UKJ1 303 aa14.59□□□□□ -0.07
NPHP4-205ENST00000466897 ANGPTL3Q9Y5C1 460 aa14.59□□□□□ -0.07
NPHP4-205ENST00000466897 SPTBN4Q9H254 2564 aa14.58□□□□□ -0.08
NPHP4-205ENST00000466897 OR7A17O14581 309 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms