RNA–Protein interactions for RNA: ENST00000466591.1

COL7A1-206, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-206ENST00000466591 NDUFA9Q16795 377 aa16.72■□□□□ 0.27
COL7A1-206ENST00000466591 MFSD4BQ5TF39 518 aa16.72■□□□□ 0.27
COL7A1-206ENST00000466591 ICE2Q659A1 982 aa16.72■□□□□ 0.27
COL7A1-206ENST00000466591 UGT3A1Q6NUS8 523 aa16.72■□□□□ 0.27
COL7A1-206ENST00000466591 LINC00696Q6ZRV3 163 aa16.72■□□□□ 0.27
COL7A1-206ENST00000466591 NEK10Q6ZWH5 1172 aa16.72■□□□□ 0.27
COL7A1-206ENST00000466591 CENPUQ71F23 418 aa16.72■□□□□ 0.27
COL7A1-206ENST00000466591 COX15Q7KZN9 410 aa16.72■□□□□ 0.27
COL7A1-206ENST00000466591 CAND1Q86VP6 1230 aaKnown RBP16.72■□□□□ 0.27
COL7A1-206ENST00000466591 DENND6AQ8IWF6 608 aa16.72■□□□□ 0.27
COL7A1-206ENST00000466591 LMNTD2Q8IXW0 634 aa16.72■□□□□ 0.27
COL7A1-206ENST00000466591 PPFIBP2Q8ND30 876 aa16.72■□□□□ 0.27
COL7A1-206ENST00000466591 COG1Q8WTW3 980 aa16.72■□□□□ 0.27
COL7A1-206ENST00000466591 INPP5DQ92835 1189 aa16.72■□□□□ 0.27
COL7A1-206ENST00000466591 MMABQ96EY8 250 aaPredicted RBP16.72■□□□□ 0.27
COL7A1-206ENST00000466591 SERPINB12Q96P63 405 aa16.72■□□□□ 0.27
COL7A1-206ENST00000466591 PKP4Q99569 1192 aa16.72■□□□□ 0.27
COL7A1-206ENST00000466591 PLCD4Q9BRC7 762 aa16.72■□□□□ 0.27
COL7A1-206ENST00000466591 TRIM56Q9BRZ2 755 aaKnown RBP16.72■□□□□ 0.27
COL7A1-206ENST00000466591 FAM167BQ9BTA0 163 aa16.72■□□□□ 0.27
COL7A1-206ENST00000466591 STOX2Q9P2F5 926 aaPredicted RBP16.72■□□□□ 0.27
COL7A1-206ENST00000466591 PCYOX1Q9UHG3 505 aa16.72■□□□□ 0.27
COL7A1-206ENST00000466591 TRMT6Q9UJA5 497 aaKnown RBP16.72■□□□□ 0.27
COL7A1-206ENST00000466591 COMMD10Q9Y6G5 202 aa16.72■□□□□ 0.27
COL7A1-206ENST00000466591 SNRNP200O75643 2136 aaKnown RBP16.72■□□□□ 0.27
COL7A1-206ENST00000466591 NSG1A0A0A6YYJ2 146 aa16.71■□□□□ 0.27
COL7A1-206ENST00000466591 OR2A25A4D2G3 310 aa16.71■□□□□ 0.27
COL7A1-206ENST00000466591 ANKUB1A6NFN9 424 aa16.71■□□□□ 0.27
COL7A1-206ENST00000466591 EZRP15311 586 aaKnown RBP16.71■□□□□ 0.27
COL7A1-206ENST00000466591 SLC1A2P43004 574 aa16.71■□□□□ 0.27
COL7A1-206ENST00000466591 SOX8P57073 446 aa16.71■□□□□ 0.27
COL7A1-206ENST00000466591 ABATP80404 500 aa16.71■□□□□ 0.27
COL7A1-206ENST00000466591 PTK6Q13882 451 aa16.71■□□□□ 0.27
COL7A1-206ENST00000466591 TTC27Q6P3X3 843 aa16.71■□□□□ 0.27
COL7A1-206ENST00000466591 KIRREL2Q6UWL6 708 aa16.71■□□□□ 0.27
COL7A1-206ENST00000466591 UBE2R2Q712K3 238 aaPredicted RBP16.71■□□□□ 0.27
COL7A1-206ENST00000466591 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.71■□□□□ 0.27
COL7A1-206ENST00000466591 MCUQ8NE86 351 aa16.71■□□□□ 0.27
COL7A1-206ENST00000466591 KCNJ9Q92806 393 aa16.71■□□□□ 0.27
COL7A1-206ENST00000466591 ALKBH8Q96BT7 664 aaKnown RBP16.71■□□□□ 0.27
COL7A1-206ENST00000466591 ZNF285Q96NJ3 590 aa16.71■□□□□ 0.27
COL7A1-206ENST00000466591 PSMG3-AS1Q96PY0 264 aa16.71■□□□□ 0.27
COL7A1-206ENST00000466591 GPR21Q99679 349 aa16.71■□□□□ 0.27
COL7A1-206ENST00000466591 ZNF160Q9HCG1 818 aa16.71■□□□□ 0.27
COL7A1-206ENST00000466591 GALPQ9UBC7 116 aa16.71■□□□□ 0.27
COL7A1-206ENST00000466591 PLEKHB1Q9UF11 243 aaPredicted RBP16.71■□□□□ 0.27
COL7A1-206ENST00000466591 ASIC3Q9UHC3 531 aa16.71■□□□□ 0.27
COL7A1-206ENST00000466591 KLK4Q9Y5K2 254 aa16.71■□□□□ 0.27
COL7A1-206ENST00000466591 A0A1W2PPV9 198 aa16.7■□□□□ 0.26
COL7A1-206ENST00000466591 A1L4Q6 167 aa16.7■□□□□ 0.26
COL7A1-206ENST00000466591 NRP2O60462 931 aa16.7■□□□□ 0.26
COL7A1-206ENST00000466591 SEMA7AO75326 666 aa16.7■□□□□ 0.26
COL7A1-206ENST00000466591 SLC16A8O95907 504 aa16.7■□□□□ 0.26
COL7A1-206ENST00000466591 ONECUT2O95948 504 aa16.7■□□□□ 0.26
COL7A1-206ENST00000466591 HPP00738 406 aa16.7■□□□□ 0.26
COL7A1-206ENST00000466591 MPC1LP0DKB6 136 aa16.7■□□□□ 0.26
COL7A1-206ENST00000466591 MAGEA6P43360 314 aa16.7■□□□□ 0.26
COL7A1-206ENST00000466591 GCGRP47871 477 aa16.7■□□□□ 0.26
COL7A1-206ENST00000466591 AVPR1BP47901 424 aa16.7■□□□□ 0.26
COL7A1-206ENST00000466591 RGS4P49798 205 aa16.7■□□□□ 0.26
COL7A1-206ENST00000466591 CLCN7P51798 805 aa16.7■□□□□ 0.26
COL7A1-206ENST00000466591 EMP2P54851 167 aa16.7■□□□□ 0.26
COL7A1-206ENST00000466591 ARG2P78540 354 aa16.7■□□□□ 0.26
COL7A1-206ENST00000466591 PRDX1Q06830 199 aaKnown RBP16.7■□□□□ 0.26
COL7A1-206ENST00000466591 GBX1Q14549 363 aa16.7■□□□□ 0.26
COL7A1-206ENST00000466591 FAAH2Q6GMR7 532 aa16.7■□□□□ 0.26
COL7A1-206ENST00000466591 LRRC8EQ6NSJ5 796 aa16.7■□□□□ 0.26
COL7A1-206ENST00000466591 ISLR2Q6UXK2 745 aa16.7■□□□□ 0.26
COL7A1-206ENST00000466591 PPIL6Q8IXY8 311 aa16.7■□□□□ 0.26
COL7A1-206ENST00000466591 KBTBD2Q8IY47 623 aa16.7■□□□□ 0.26
COL7A1-206ENST00000466591 DTWD1Q8N5C7 304 aa16.7■□□□□ 0.26
COL7A1-206ENST00000466591 OR11G2Q8NGC1 345 aa16.7■□□□□ 0.26
COL7A1-206ENST00000466591 MCOLN3Q8TDD5 553 aa16.7■□□□□ 0.26
COL7A1-206ENST00000466591 PPP4R1Q8TF05 950 aa16.7■□□□□ 0.26
COL7A1-206ENST00000466591 MVB12AQ96EY5 273 aa16.7■□□□□ 0.26
COL7A1-206ENST00000466591 MAGEB10Q96LZ2 347 aaPredicted RBP16.7■□□□□ 0.26
COL7A1-206ENST00000466591 C5orf34Q96MH7 638 aa16.7■□□□□ 0.26
COL7A1-206ENST00000466591 DRC3Q9H069 523 aa16.7■□□□□ 0.26
COL7A1-206ENST00000466591 PPANQ9NQ55 473 aaKnown RBP16.7■□□□□ 0.26
COL7A1-206ENST00000466591 CCDC177Q9NQR7 707 aaPredicted RBP16.7■□□□□ 0.26
COL7A1-206ENST00000466591 C14orf105Q9NVL8 296 aa16.7■□□□□ 0.26
COL7A1-206ENST00000466591 RUVBL1Q9Y265 456 aaKnown RBP16.7■□□□□ 0.26
COL7A1-206ENST00000466591 SEC16AO15027 2179 aa16.7■□□□□ 0.26
COL7A1-206ENST00000466591 DYTNA2CJ06 578 aa16.69■□□□□ 0.26
COL7A1-206ENST00000466591 ZSCAN12O43309 604 aa16.69■□□□□ 0.26
COL7A1-206ENST00000466591 DDAH2O95865 285 aa16.69■□□□□ 0.26
COL7A1-206ENST00000466591 F7P08709 466 aaPredicted RBP16.69■□□□□ 0.26
COL7A1-206ENST00000466591 YBX1P67809 324 aaKnown RBP16.69■□□□□ 0.26
COL7A1-206ENST00000466591 EEF1A2Q05639 463 aaKnown RBP16.69■□□□□ 0.26
COL7A1-206ENST00000466591 DSG2Q14126 1118 aa16.69■□□□□ 0.26
COL7A1-206ENST00000466591 ZNF169Q14929 603 aaPredicted RBP16.69■□□□□ 0.26
COL7A1-206ENST00000466591 TLR1Q15399 786 aa16.69■□□□□ 0.26
COL7A1-206ENST00000466591 HKDC1Q2TB90 917 aa16.69■□□□□ 0.26
COL7A1-206ENST00000466591 HSP90AA5PQ58FG0 334 aa16.69■□□□□ 0.26
COL7A1-206ENST00000466591 VWA2Q5GFL6 755 aa16.69■□□□□ 0.26
COL7A1-206ENST00000466591 Q6ZS92 163 aa16.69■□□□□ 0.26
COL7A1-206ENST00000466591 KCNMB4Q86W47 210 aa16.69■□□□□ 0.26
COL7A1-206ENST00000466591 TMEM151BQ8IW70 566 aa16.69■□□□□ 0.26
COL7A1-206ENST00000466591 CPNE9Q8IYJ1 553 aa16.69■□□□□ 0.26
COL7A1-206ENST00000466591 RASGEF1CQ8N431 466 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms