RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 ANOS1P23352 680 aa3.97□□□□□ -1.77
CDC42BPA-211ENST00000466538 ITGA3P26006 1051 aa3.97□□□□□ -1.77
CDC42BPA-211ENST00000466538 CEACAM8P31997 349 aaPredicted RBP3.97□□□□□ -1.77
CDC42BPA-211ENST00000466538 CETN2P41208 172 aa3.97□□□□□ -1.77
CDC42BPA-211ENST00000466538 FRKP42685 505 aaPredicted RBP3.97□□□□□ -1.77
CDC42BPA-211ENST00000466538 IER3P46695 156 aa3.97□□□□□ -1.77
CDC42BPA-211ENST00000466538 NPBWR1P48145 328 aa3.97□□□□□ -1.77
CDC42BPA-211ENST00000466538 TRAP1Q12931 704 aaKnown RBP3.97□□□□□ -1.77
CDC42BPA-211ENST00000466538 CCDC158Q5M9N0 1113 aa3.97□□□□□ -1.77
CDC42BPA-211ENST00000466538 FAM166AQ6J272 317 aa3.97□□□□□ -1.77
CDC42BPA-211ENST00000466538 G2E3Q7L622 706 aa3.97□□□□□ -1.77
CDC42BPA-211ENST00000466538 ISCA2Q86U28 154 aa3.97□□□□□ -1.77
CDC42BPA-211ENST00000466538 ANKRD46Q86W74 232 aa3.97□□□□□ -1.77
CDC42BPA-211ENST00000466538 SIAH3Q8IW03 269 aa3.97□□□□□ -1.77
CDC42BPA-211ENST00000466538 SYCP3Q8IZU3 236 aa3.97□□□□□ -1.77
CDC42BPA-211ENST00000466538 STPG4Q8N801 248 aa3.97□□□□□ -1.77
CDC42BPA-211ENST00000466538 ZNF713Q8N859 430 aaPredicted RBP3.97□□□□□ -1.77
CDC42BPA-211ENST00000466538 UXS1Q8NBZ7 420 aa3.97□□□□□ -1.77
CDC42BPA-211ENST00000466538 DBF4BQ8NFT6 615 aa3.97□□□□□ -1.77
CDC42BPA-211ENST00000466538 OR10Q1Q8NGQ4 319 aa3.97□□□□□ -1.77
CDC42BPA-211ENST00000466538 CENPTQ96BT3 561 aa3.97□□□□□ -1.77
CDC42BPA-211ENST00000466538 EPYCQ99645 322 aa3.97□□□□□ -1.77
CDC42BPA-211ENST00000466538 HNRNPABQ99729 332 aaKnown RBP3.97□□□□□ -1.77
CDC42BPA-211ENST00000466538 CDK19Q9BWU1 502 aa3.97□□□□□ -1.77
CDC42BPA-211ENST00000466538 LSG1Q9H089 658 aaKnown RBP3.97□□□□□ -1.77
CDC42BPA-211ENST00000466538 TMEM161AQ9NX61 479 aa3.97□□□□□ -1.77
CDC42BPA-211ENST00000466538 P4HTMQ9NXG6 502 aa3.97□□□□□ -1.77
CDC42BPA-211ENST00000466538 FBXL5Q9UKA1 691 aa3.97□□□□□ -1.77
CDC42BPA-211ENST00000466538 RIPK3Q9Y572 518 aa3.97□□□□□ -1.77
CDC42BPA-211ENST00000466538 A0A0G2JLW4 131 aa3.96□□□□□ -1.78
CDC42BPA-211ENST00000466538 C2CD4DB7Z1M9 353 aa3.96□□□□□ -1.78
CDC42BPA-211ENST00000466538 F8VVB4 439 aa3.96□□□□□ -1.78
CDC42BPA-211ENST00000466538 F8VWA3 439 aa3.96□□□□□ -1.78
CDC42BPA-211ENST00000466538 NPIPA3F8WFD2 350 aa3.96□□□□□ -1.78
CDC42BPA-211ENST00000466538 SLC22A2O15244 555 aa3.96□□□□□ -1.78
CDC42BPA-211ENST00000466538 GLRA3O75311 464 aa3.96□□□□□ -1.78
CDC42BPA-211ENST00000466538 KRT33AO76009 404 aa3.96□□□□□ -1.78
CDC42BPA-211ENST00000466538 GOSR1O95249 250 aa3.96□□□□□ -1.78
CDC42BPA-211ENST00000466538 GH1P01241 217 aa3.96□□□□□ -1.78
CDC42BPA-211ENST00000466538 ANKRD34CP0C6C1 535 aa3.96□□□□□ -1.78
CDC42BPA-211ENST00000466538 STAG3L1P0CL83 205 aa3.96□□□□□ -1.78
CDC42BPA-211ENST00000466538 LBPP18428 481 aa3.96□□□□□ -1.78
CDC42BPA-211ENST00000466538 ALDH4A1P30038 563 aa3.96□□□□□ -1.78
CDC42BPA-211ENST00000466538 KCNJ1P48048 391 aa3.96□□□□□ -1.78
CDC42BPA-211ENST00000466538 KHKP50053 298 aa3.96□□□□□ -1.78
CDC42BPA-211ENST00000466538 PHEXP78562 749 aa3.96□□□□□ -1.78
CDC42BPA-211ENST00000466538 IL10RBQ08334 325 aa3.96□□□□□ -1.78
CDC42BPA-211ENST00000466538 GPR17Q13304 367 aa3.96□□□□□ -1.78
CDC42BPA-211ENST00000466538 RBBP5Q15291 538 aaKnown RBP3.96□□□□□ -1.78
CDC42BPA-211ENST00000466538 UGP2Q16851 508 aa3.96□□□□□ -1.78
CDC42BPA-211ENST00000466538 ZNF674Q2M3X9 581 aa3.96□□□□□ -1.78
CDC42BPA-211ENST00000466538 KIAA1644Q3SXP7 199 aa3.96□□□□□ -1.78
CDC42BPA-211ENST00000466538 LBHQ53QV2 105 aaPredicted RBP3.96□□□□□ -1.78
CDC42BPA-211ENST00000466538 XKR6Q5GH73 641 aa3.96□□□□□ -1.78
CDC42BPA-211ENST00000466538 LCN1P1Q5VSP4 162 aa3.96□□□□□ -1.78
CDC42BPA-211ENST00000466538 FUT10Q6P4F1 479 aa3.96□□□□□ -1.78
CDC42BPA-211ENST00000466538 NHLRC1Q6VVB1 395 aa3.96□□□□□ -1.78
CDC42BPA-211ENST00000466538 RBMS3Q6XE24 437 aaKnown RBP3.96□□□□□ -1.78
CDC42BPA-211ENST00000466538 SLC26A9Q7LBE3 791 aa3.96□□□□□ -1.78
CDC42BPA-211ENST00000466538 TRMT1LQ7Z2T5 733 aaKnown RBP3.96□□□□□ -1.78
CDC42BPA-211ENST00000466538 GPR141Q7Z602 305 aa3.96□□□□□ -1.78
CDC42BPA-211ENST00000466538 TRPT1Q86TN4 253 aaKnown RBP3.96□□□□□ -1.78
CDC42BPA-211ENST00000466538 MEX3DQ86XN8 651 aaKnown RBP3.96□□□□□ -1.78
CDC42BPA-211ENST00000466538 APCDD1Q8J025 514 aa3.96□□□□□ -1.78
CDC42BPA-211ENST00000466538 CIARTQ8N365 385 aaPredicted RBP3.96□□□□□ -1.78
CDC42BPA-211ENST00000466538 ZNF383Q8NA42 475 aa3.96□□□□□ -1.78
CDC42BPA-211ENST00000466538 OR13C3Q8NGS6 347 aa3.96□□□□□ -1.78
CDC42BPA-211ENST00000466538 CKAP2Q8WWK9 683 aa3.96□□□□□ -1.78
CDC42BPA-211ENST00000466538 FCAMRQ8WWV6 532 aa3.96□□□□□ -1.78
CDC42BPA-211ENST00000466538 TSACCQ96A04 125 aaPredicted RBP3.96□□□□□ -1.78
CDC42BPA-211ENST00000466538 PYCR2Q96C36 320 aa3.96□□□□□ -1.78
CDC42BPA-211ENST00000466538 CTAGE1Q96RT6 745 aa3.96□□□□□ -1.78
CDC42BPA-211ENST00000466538 CDCA3Q99618 268 aaPredicted RBP3.96□□□□□ -1.78
CDC42BPA-211ENST00000466538 UBQLN3Q9H347 655 aa3.96□□□□□ -1.78
CDC42BPA-211ENST00000466538 C10orf88Q9H8K7 445 aa3.96□□□□□ -1.78
CDC42BPA-211ENST00000466538 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.96□□□□□ -1.78
CDC42BPA-211ENST00000466538 A0A0B4J203 849 aa3.95□□□□□ -1.78
CDC42BPA-211ENST00000466538 SMIM1B2RUZ4 78 aa3.95□□□□□ -1.78
CDC42BPA-211ENST00000466538 KLF11O14901 512 aa3.95□□□□□ -1.78
CDC42BPA-211ENST00000466538 EPHB6O15197 1021 aa3.95□□□□□ -1.78
CDC42BPA-211ENST00000466538 PCDH7O60245 1069 aa3.95□□□□□ -1.78
CDC42BPA-211ENST00000466538 CDK2AP2O75956 126 aa3.95□□□□□ -1.78
CDC42BPA-211ENST00000466538 SLC16A8O95907 504 aa3.95□□□□□ -1.78
CDC42BPA-211ENST00000466538 SERPING1P05155 500 aa3.95□□□□□ -1.78
CDC42BPA-211ENST00000466538 C8orf89P0DMQ9 161 aa3.95□□□□□ -1.78
CDC42BPA-211ENST00000466538 KRT3P12035 628 aa3.95□□□□□ -1.78
CDC42BPA-211ENST00000466538 CCND3P30281 292 aaPredicted RBP3.95□□□□□ -1.78
CDC42BPA-211ENST00000466538 SFTPDP35247 375 aa3.95□□□□□ -1.78
CDC42BPA-211ENST00000466538 KRTAP10-11P60412 298 aa3.95□□□□□ -1.78
CDC42BPA-211ENST00000466538 KCNJ10P78508 379 aa3.95□□□□□ -1.78
CDC42BPA-211ENST00000466538 OPCMLQ14982 345 aa3.95□□□□□ -1.78
CDC42BPA-211ENST00000466538 HERC3Q15034 1050 aa3.95□□□□□ -1.78
CDC42BPA-211ENST00000466538 C2orf76Q3KRA6 126 aa3.95□□□□□ -1.78
CDC42BPA-211ENST00000466538 XKR3Q5GH77 459 aa3.95□□□□□ -1.78
CDC42BPA-211ENST00000466538 UGT3A1Q6NUS8 523 aa3.95□□□□□ -1.78
CDC42BPA-211ENST00000466538 CTR9Q6PD62 1173 aa3.95□□□□□ -1.78
CDC42BPA-211ENST00000466538 BTNL8Q6UX41 500 aa3.95□□□□□ -1.78
CDC42BPA-211ENST00000466538 RAPH1Q70E73 1250 aa3.95□□□□□ -1.78
CDC42BPA-211ENST00000466538 SMIM29Q86T20 159 aa3.95□□□□□ -1.78
CDC42BPA-211ENST00000466538 RCOR2Q8IZ40 523 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms