RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 IMP3Q9NV31 184 aaKnown RBP18.02■□□□□ 0.48
CAPN3-209ENST00000466222 CACNA1IQ9P0X4 2223 aa18.02■□□□□ 0.48
CAPN3-209ENST00000466222 FBP2O00757 339 aa18.02■□□□□ 0.47
CAPN3-209ENST00000466222 HRO43593 1189 aa18.02■□□□□ 0.47
CAPN3-209ENST00000466222 FGF4P08620 206 aa18.02■□□□□ 0.47
CAPN3-209ENST00000466222 FAM58BPP0C7Q3 252 aa18.02■□□□□ 0.47
CAPN3-209ENST00000466222 SLC35G4P0C7Q5 338 aa18.02■□□□□ 0.47
CAPN3-209ENST00000466222 SLC7A1P30825 629 aa18.02■□□□□ 0.47
CAPN3-209ENST00000466222 ACTR1BP42025 376 aa18.02■□□□□ 0.47
CAPN3-209ENST00000466222 ACTR1AP61163 376 aa18.02■□□□□ 0.47
CAPN3-209ENST00000466222 RACK1P63244 317 aaKnown RBP18.02■□□□□ 0.47
CAPN3-209ENST00000466222 GRB7Q14451 532 aa18.02■□□□□ 0.47
CAPN3-209ENST00000466222 PCBP2Q15366 365 aaKnown RBP eCLIP18.02■□□□□ 0.47
CAPN3-209ENST00000466222 PTCHD3Q3KNS1 767 aa18.02■□□□□ 0.47
CAPN3-209ENST00000466222 PRMT9Q6P2P2 845 aa18.02■□□□□ 0.47
CAPN3-209ENST00000466222 GOLGA7Q7Z5G4 137 aa18.02■□□□□ 0.47
CAPN3-209ENST00000466222 RNF148Q8N7C7 305 aa18.02■□□□□ 0.47
CAPN3-209ENST00000466222 DTWD2Q8NBA8 298 aa18.02■□□□□ 0.47
CAPN3-209ENST00000466222 C12orf66Q96MD2 445 aa18.02■□□□□ 0.47
CAPN3-209ENST00000466222 C1QTNF3Q9BXJ4 246 aa18.02■□□□□ 0.47
CAPN3-209ENST00000466222 PCED1AQ9H1Q7 454 aa18.02■□□□□ 0.47
CAPN3-209ENST00000466222 DUSP15Q9H1R2 295 aaPredicted RBP18.02■□□□□ 0.47
CAPN3-209ENST00000466222 NOL11Q9H8H0 719 aaKnown RBP18.02■□□□□ 0.47
CAPN3-209ENST00000466222 TMEM181Q9P2C4 612 aa18.02■□□□□ 0.47
CAPN3-209ENST00000466222 STOX2Q9P2F5 926 aaPredicted RBP18.02■□□□□ 0.47
CAPN3-209ENST00000466222 CD300AQ9UGN4 299 aa18.02■□□□□ 0.47
CAPN3-209ENST00000466222 ACSL5Q9ULC5 683 aa18.02■□□□□ 0.47
CAPN3-209ENST00000466222 TDRKHQ9Y2W6 561 aaKnown RBP18.02■□□□□ 0.47
CAPN3-209ENST00000466222 TCRBV3S1A0A5B6 114 aa18.01■□□□□ 0.47
CAPN3-209ENST00000466222 CLPTM1O96005 669 aa18.01■□□□□ 0.47
CAPN3-209ENST00000466222 IDSP22304 550 aa18.01■□□□□ 0.47
CAPN3-209ENST00000466222 IMPA1P29218 277 aa18.01■□□□□ 0.47
CAPN3-209ENST00000466222 NUDT1P36639 197 aa18.01■□□□□ 0.47
CAPN3-209ENST00000466222 SPATS1Q496A3 300 aa18.01■□□□□ 0.47
CAPN3-209ENST00000466222 AP1ARQ63HQ0 302 aa18.01■□□□□ 0.47
CAPN3-209ENST00000466222 WDR5BQ86VZ2 330 aa18.01■□□□□ 0.47
CAPN3-209ENST00000466222 MFSD2AQ8NA29 543 aa18.01■□□□□ 0.47
CAPN3-209ENST00000466222 DGCR14Q96DF8 476 aaKnown RBP18.01■□□□□ 0.47
CAPN3-209ENST00000466222 C19orf60Q96EN9 201 aa18.01■□□□□ 0.47
CAPN3-209ENST00000466222 MID1IP1Q9NPA3 183 aa18.01■□□□□ 0.47
CAPN3-209ENST00000466222 TMEM74BQ9NUR3 256 aa18.01■□□□□ 0.47
CAPN3-209ENST00000466222 PIKFYVEQ9Y2I7 2098 aa18■□□□□ 0.47
CAPN3-209ENST00000466222 CCDC163A0A0D9SF12 145 aa18■□□□□ 0.47
CAPN3-209ENST00000466222 TLR4O00206 839 aa18■□□□□ 0.47
CAPN3-209ENST00000466222 IFRD1O00458 451 aaPredicted RBP18■□□□□ 0.47
CAPN3-209ENST00000466222 OR7A17O14581 309 aa18■□□□□ 0.47
CAPN3-209ENST00000466222 STK16O75716 305 aa18■□□□□ 0.47
CAPN3-209ENST00000466222 EPORP19235 508 aa18■□□□□ 0.47
CAPN3-209ENST00000466222 CDKL1Q00532 357 aa18■□□□□ 0.47
CAPN3-209ENST00000466222 SYVN1Q86TM6 617 aa18■□□□□ 0.47
CAPN3-209ENST00000466222 ZNF480Q8WV37 535 aa18■□□□□ 0.47
CAPN3-209ENST00000466222 DNASE2BQ8WZ79 361 aa18■□□□□ 0.47
CAPN3-209ENST00000466222 INTS7Q9NVH2 962 aaKnown RBP18■□□□□ 0.47
CAPN3-209ENST00000466222 UBAP1Q9NZ09 502 aa18■□□□□ 0.47
CAPN3-209ENST00000466222 CCDC167Q9P0B6 97 aa18■□□□□ 0.47
CAPN3-209ENST00000466222 SLC22A14Q9Y267 594 aa18■□□□□ 0.47
CAPN3-209ENST00000466222 DGKBQ9Y6T7 804 aa18■□□□□ 0.47
CAPN3-209ENST00000466222 KATNA1O75449 491 aa18■□□□□ 0.47
CAPN3-209ENST00000466222 TNFP01375 233 aa18■□□□□ 0.47
CAPN3-209ENST00000466222 MSX2P35548 267 aaPredicted RBP18■□□□□ 0.47
CAPN3-209ENST00000466222 AP1S2P56377 157 aa18■□□□□ 0.47
CAPN3-209ENST00000466222 LCP2Q13094 533 aa18■□□□□ 0.47
CAPN3-209ENST00000466222 LSAMPQ13449 338 aa18■□□□□ 0.47
CAPN3-209ENST00000466222 NAE1Q13564 534 aa18■□□□□ 0.47
CAPN3-209ENST00000466222 GTF2H2Q13888 395 aa18■□□□□ 0.47
CAPN3-209ENST00000466222 RBBP7Q16576 425 aa18■□□□□ 0.47
CAPN3-209ENST00000466222 IL23RQ5VWK5 629 aa18■□□□□ 0.47
CAPN3-209ENST00000466222 GTF2H2CQ6P1K8 395 aa18■□□□□ 0.47
CAPN3-209ENST00000466222 PAOXQ6QHF9 649 aa18■□□□□ 0.47
CAPN3-209ENST00000466222 AGTRAPQ6RW13 159 aa18■□□□□ 0.47
CAPN3-209ENST00000466222 LPCAT2Q7L5N7 544 aa18■□□□□ 0.47
CAPN3-209ENST00000466222 PARGQ86W56 976 aa18■□□□□ 0.47
CAPN3-209ENST00000466222 ALDH16A1Q8IZ83 802 aa18■□□□□ 0.47
CAPN3-209ENST00000466222 GOLM1Q8NBJ4 401 aa18■□□□□ 0.47
CAPN3-209ENST00000466222 PATE1Q8WXA2 126 aa18■□□□□ 0.47
CAPN3-209ENST00000466222 EME1Q96AY2 570 aa18■□□□□ 0.47
CAPN3-209ENST00000466222 MED8Q96G25 268 aa18■□□□□ 0.47
CAPN3-209ENST00000466222 ZNF597Q96LX8 424 aa18■□□□□ 0.47
CAPN3-209ENST00000466222 HOPXQ9BPY8 73 aaPredicted RBP18■□□□□ 0.47
CAPN3-209ENST00000466222 IPPKQ9H8X2 491 aa18■□□□□ 0.47
CAPN3-209ENST00000466222 NDUFAF1Q9Y375 327 aa18■□□□□ 0.47
CAPN3-209ENST00000466222 TNPO3Q9Y5L0 923 aaKnown RBP18■□□□□ 0.47
CAPN3-209ENST00000466222 PABPN1LA6NDY0 278 aaKnown RBP17.99■□□□□ 0.47
CAPN3-209ENST00000466222 FAM86C2PA6NEL3 165 aa17.99■□□□□ 0.47
CAPN3-209ENST00000466222 TOR1BO14657 336 aa17.99■□□□□ 0.47
CAPN3-209ENST00000466222 VPS4BO75351 444 aa17.99■□□□□ 0.47
CAPN3-209ENST00000466222 ZNF26P17031 533 aaPredicted RBP17.99■□□□□ 0.47
CAPN3-209ENST00000466222 GGT5P36269 586 aa17.99■□□□□ 0.47
CAPN3-209ENST00000466222 SLC6A12P48065 614 aa17.99■□□□□ 0.47
CAPN3-209ENST00000466222 DHPSP49366 369 aaPredicted RBP17.99■□□□□ 0.47
CAPN3-209ENST00000466222 ERVPABLB-1P60509 514 aa17.99■□□□□ 0.47
CAPN3-209ENST00000466222 MAP7Q14244 749 aa17.99■□□□□ 0.47
CAPN3-209ENST00000466222 UAP1L1Q3KQV9 507 aa17.99■□□□□ 0.47
CAPN3-209ENST00000466222 COQ5Q5HYK3 327 aa17.99■□□□□ 0.47
CAPN3-209ENST00000466222 SUSD1Q6UWL2 747 aa17.99■□□□□ 0.47
CAPN3-209ENST00000466222 PHACTR4Q8IZ21 702 aa17.99■□□□□ 0.47
CAPN3-209ENST00000466222 OR5K2Q8NHB8 316 aa17.99■□□□□ 0.47
CAPN3-209ENST00000466222 JPH3Q8WXH2 748 aaPredicted RBP17.99■□□□□ 0.47
CAPN3-209ENST00000466222 ATP6V1E2Q96A05 226 aa17.99■□□□□ 0.47
CAPN3-209ENST00000466222 ZUFSPQ96AP4 578 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms