RNA–Protein interactions for RNA: ENST00000466159.6

SYNE1-217, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 1 (best) BASIC

Gene SYNE1, Length 2,610 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-217ENST00000466159 CSGALNACT1Q8TDX6 532 aa8.67□□□□□ -1.02
SYNE1-217ENST00000466159 BTN2A2Q8WVV5 523 aa8.67□□□□□ -1.02
SYNE1-217ENST00000466159 TMEM159Q96B96 161 aa8.67□□□□□ -1.02
SYNE1-217ENST00000466159 RDH12Q96NR8 316 aa8.67□□□□□ -1.02
SYNE1-217ENST00000466159 BARD1Q99728 777 aaKnown RBP8.67□□□□□ -1.02
SYNE1-217ENST00000466159 FANCEQ9HB96 536 aa8.67□□□□□ -1.02
SYNE1-217ENST00000466159 AASDHPPTQ9NRN7 309 aa8.67□□□□□ -1.02
SYNE1-217ENST00000466159 EXD2Q9NVH0 621 aa8.67□□□□□ -1.02
SYNE1-217ENST00000466159 USE1Q9NZ43 259 aa8.67□□□□□ -1.02
SYNE1-217ENST00000466159 VPS29Q9UBQ0 182 aa8.67□□□□□ -1.02
SYNE1-217ENST00000466159 ITM2BQ9Y287 266 aa8.67□□□□□ -1.02
SYNE1-217ENST00000466159 BTBD3Q9Y2F9 522 aa8.67□□□□□ -1.02
SYNE1-217ENST00000466159 A0A1W2PPW3 197 aa8.66□□□□□ -1.02
SYNE1-217ENST00000466159 SERTM1A2A2V5 107 aa8.66□□□□□ -1.02
SYNE1-217ENST00000466159 CARNS1A5YM72 827 aa8.66□□□□□ -1.02
SYNE1-217ENST00000466159 EVPLLA8MZ36 301 aa8.66□□□□□ -1.02
SYNE1-217ENST00000466159 AP2A2O94973 939 aa8.66□□□□□ -1.02
SYNE1-217ENST00000466159 ETHE1O95571 254 aa8.66□□□□□ -1.02
SYNE1-217ENST00000466159 SLC16A8O95907 504 aa8.66□□□□□ -1.02
SYNE1-217ENST00000466159 LAMP1P11279 417 aa8.66□□□□□ -1.02
SYNE1-217ENST00000466159 COX7A2P14406 83 aa8.66□□□□□ -1.02
SYNE1-217ENST00000466159 PTPN2P17706 415 aa8.66□□□□□ -1.02
SYNE1-217ENST00000466159 AGXTP21549 392 aa8.66□□□□□ -1.02
SYNE1-217ENST00000466159 XPAP23025 273 aaPredicted RBP8.66□□□□□ -1.02
SYNE1-217ENST00000466159 PDHA2P29803 388 aa8.66□□□□□ -1.02
SYNE1-217ENST00000466159 PBLDP30039 288 aaPredicted RBP8.66□□□□□ -1.02
SYNE1-217ENST00000466159 EMP3P54852 163 aa8.66□□□□□ -1.02
SYNE1-217ENST00000466159 PIGFQ07326 219 aa8.66□□□□□ -1.02
SYNE1-217ENST00000466159 MYBPC3Q14896 1274 aa8.66□□□□□ -1.02
SYNE1-217ENST00000466159 GRIN2CQ14957 1233 aa8.66□□□□□ -1.02
SYNE1-217ENST00000466159 C16orf72Q14CZ0 275 aa8.66□□□□□ -1.02
SYNE1-217ENST00000466159 ZNF77Q15935 545 aa8.66□□□□□ -1.02
SYNE1-217ENST00000466159 DUOXA1Q1HG43 343 aa8.66□□□□□ -1.02
SYNE1-217ENST00000466159 SYTL3Q4VX76 610 aa8.66□□□□□ -1.02
SYNE1-217ENST00000466159 FGD3Q5JSP0 725 aa8.66□□□□□ -1.02
SYNE1-217ENST00000466159 ZDHHC21Q8IVQ6 265 aa8.66□□□□□ -1.02
SYNE1-217ENST00000466159 CHDHQ8NE62 594 aaPredicted RBP8.66□□□□□ -1.02
SYNE1-217ENST00000466159 NELL1Q92832 810 aa8.66□□□□□ -1.02
SYNE1-217ENST00000466159 FCRL1Q96LA6 429 aa8.66□□□□□ -1.02
SYNE1-217ENST00000466159 DPH2Q9BQC3 489 aaPredicted RBP8.66□□□□□ -1.02
SYNE1-217ENST00000466159 ZSCAN5AQ9BUG6 496 aa8.66□□□□□ -1.02
SYNE1-217ENST00000466159 STOX2Q9P2F5 926 aaPredicted RBP8.66□□□□□ -1.02
SYNE1-217ENST00000466159 IL36AQ9UHA7 158 aa8.66□□□□□ -1.02
SYNE1-217ENST00000466159 TMEFF2Q9UIK5 374 aaPredicted RBP8.66□□□□□ -1.02
SYNE1-217ENST00000466159 ABCG2Q9UNQ0 655 aa8.66□□□□□ -1.02
SYNE1-217ENST00000466159 LOC100130705A0A1B0GUX0 176 aa8.66□□□□□ -1.02
SYNE1-217ENST00000466159 MAGEB17A8MXT2 336 aa8.66□□□□□ -1.02
SYNE1-217ENST00000466159 MITFO75030 526 aaPredicted RBP8.66□□□□□ -1.02
SYNE1-217ENST00000466159 DIRAS1O95057 198 aa8.66□□□□□ -1.02
SYNE1-217ENST00000466159 CCNDBP1O95273 360 aa8.66□□□□□ -1.02
SYNE1-217ENST00000466159 KCNK5O95279 499 aa8.66□□□□□ -1.02
SYNE1-217ENST00000466159 CPNE6O95741 557 aa8.66□□□□□ -1.02
SYNE1-217ENST00000466159 TTKP33981 857 aa8.66□□□□□ -1.02
SYNE1-217ENST00000466159 NNMTP40261 264 aa8.66□□□□□ -1.02
SYNE1-217ENST00000466159 METAP1P53582 386 aa8.66□□□□□ -1.02
SYNE1-217ENST00000466159 EPHA5P54756 1037 aa8.66□□□□□ -1.02
SYNE1-217ENST00000466159 NUP107P57740 925 aa8.66□□□□□ -1.02
SYNE1-217ENST00000466159 CD47Q08722 323 aa8.66□□□□□ -1.02
SYNE1-217ENST00000466159 TMEM115Q12893 351 aaPredicted RBP8.66□□□□□ -1.02
SYNE1-217ENST00000466159 CSTF3Q12996 717 aaKnown RBP8.66□□□□□ -1.02
SYNE1-217ENST00000466159 DCTN2Q13561 401 aaKnown RBP8.66□□□□□ -1.02
SYNE1-217ENST00000466159 KCNC3Q14003 757 aa8.66□□□□□ -1.02
SYNE1-217ENST00000466159 DMC1Q14565 340 aa8.66□□□□□ -1.02
SYNE1-217ENST00000466159 ZNF284Q2VY69 593 aa8.66□□□□□ -1.02
SYNE1-217ENST00000466159 C6orf141Q5SZD1 244 aa8.66□□□□□ -1.02
SYNE1-217ENST00000466159 ZNF697Q5TEC3 545 aa8.66□□□□□ -1.02
SYNE1-217ENST00000466159 BROXQ5VW32 411 aa8.66□□□□□ -1.02
SYNE1-217ENST00000466159 XAF1Q6GPH4 301 aa8.66□□□□□ -1.02
SYNE1-217ENST00000466159 LAIR2Q6ISS4 152 aa8.66□□□□□ -1.02
SYNE1-217ENST00000466159 TECPR1Q7Z6L1 1165 aa8.66□□□□□ -1.02
SYNE1-217ENST00000466159 KIAA0907Q7Z7F0 614 aaPredicted RBP8.66□□□□□ -1.02
SYNE1-217ENST00000466159 SERPINA11Q86U17 422 aa8.66□□□□□ -1.02
SYNE1-217ENST00000466159 DCP2Q8IU60 420 aaKnown RBP8.66□□□□□ -1.02
SYNE1-217ENST00000466159 LMNTD1Q8N9Z9 388 aa8.66□□□□□ -1.02
SYNE1-217ENST00000466159 ZNF420Q8TAQ5 688 aaPredicted RBP8.66□□□□□ -1.02
SYNE1-217ENST00000466159 ING5Q8WYH8 240 aa8.66□□□□□ -1.02
SYNE1-217ENST00000466159 CLP1Q92989 425 aaKnown RBP8.66□□□□□ -1.02
SYNE1-217ENST00000466159 GLYATL1Q969I3 302 aa8.66□□□□□ -1.02
SYNE1-217ENST00000466159 PAWRQ96IZ0 340 aaKnown RBP8.66□□□□□ -1.02
SYNE1-217ENST00000466159 PKP4Q99569 1192 aa8.66□□□□□ -1.02
SYNE1-217ENST00000466159 DOK1Q99704 481 aa8.66□□□□□ -1.02
SYNE1-217ENST00000466159 SGK2Q9HBY8 427 aa8.66□□□□□ -1.02
SYNE1-217ENST00000466159 PRM3Q9NNZ6 103 aa8.66□□□□□ -1.02
SYNE1-217ENST00000466159 SPATA6Q9NWH7 488 aaPredicted RBP8.66□□□□□ -1.02
SYNE1-217ENST00000466159 FBXO10Q9UK96 956 aa8.66□□□□□ -1.02
SYNE1-217ENST00000466159 KIAA0100Q14667 2235 aaKnown RBP8.65□□□□□ -1.02
SYNE1-217ENST00000466159 NPC1O15118 1278 aa8.65□□□□□ -1.02
SYNE1-217ENST00000466159 UGDHO60701 494 aa8.65□□□□□ -1.02
SYNE1-217ENST00000466159 ABCB7O75027 752 aa8.65□□□□□ -1.02
SYNE1-217ENST00000466159 EFCAB14O75071 495 aa8.65□□□□□ -1.02
SYNE1-217ENST00000466159 HTR1AP08908 422 aa8.65□□□□□ -1.02
SYNE1-217ENST00000466159 ACPPP15309 386 aa8.65□□□□□ -1.02
SYNE1-217ENST00000466159 IL1RNP18510 177 aa8.65□□□□□ -1.02
SYNE1-217ENST00000466159 CD247P20963 164 aa8.65□□□□□ -1.02
SYNE1-217ENST00000466159 IMPA1P29218 277 aa8.65□□□□□ -1.02
SYNE1-217ENST00000466159 TRPC1P48995 793 aa8.65□□□□□ -1.02
SYNE1-217ENST00000466159 SRSF11Q05519 484 aaKnown RBP8.65□□□□□ -1.02
SYNE1-217ENST00000466159 ACSM2AQ08AH3 577 aa8.65□□□□□ -1.02
SYNE1-217ENST00000466159 EPS8Q12929 822 aa8.65□□□□□ -1.02
SYNE1-217ENST00000466159 GTF2H3Q13889 308 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms