RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 GRK2P25098 689 aa10.72□□□□□ -0.69
VCP-204ENST00000466100 SERPINB5P36952 375 aa10.72□□□□□ -0.69
VCP-204ENST00000466100 GRIA3P42263 894 aa10.72□□□□□ -0.69
VCP-204ENST00000466100 PDX1P52945 283 aa10.72□□□□□ -0.69
VCP-204ENST00000466100 ABATP80404 500 aa10.72□□□□□ -0.69
VCP-204ENST00000466100 GALNT1Q10472 559 aaPredicted RBP10.72□□□□□ -0.69
VCP-204ENST00000466100 BST1Q10588 318 aa10.72□□□□□ -0.69
VCP-204ENST00000466100 PRKAA1Q13131 559 aa10.72□□□□□ -0.69
VCP-204ENST00000466100 SF1Q15637 639 aaKnown RBP10.72□□□□□ -0.69
VCP-204ENST00000466100 TRIP6Q15654 476 aaKnown RBP10.72□□□□□ -0.69
VCP-204ENST00000466100 TBCCQ15814 346 aa10.72□□□□□ -0.69
VCP-204ENST00000466100 ZIC1Q15915 447 aa10.72□□□□□ -0.69
VCP-204ENST00000466100 THEMIS2Q5TEJ8 643 aa10.72□□□□□ -0.69
VCP-204ENST00000466100 ATG9BQ674R7 924 aa10.72□□□□□ -0.69
VCP-204ENST00000466100 IRGCQ6NXR0 463 aa10.72□□□□□ -0.69
VCP-204ENST00000466100 LETMD1Q6P1Q0 360 aa10.72□□□□□ -0.69
VCP-204ENST00000466100 TMEM71Q6P5X7 295 aa10.72□□□□□ -0.69
VCP-204ENST00000466100 NXPE4Q6UWF7 544 aa10.72□□□□□ -0.69
VCP-204ENST00000466100 RGS9BPQ6ZS82 235 aa10.72□□□□□ -0.69
VCP-204ENST00000466100 USP53Q70EK8 1073 aa10.72□□□□□ -0.69
VCP-204ENST00000466100 PRSS42Q7Z5A4 293 aa10.72□□□□□ -0.69
VCP-204ENST00000466100 PAQR7Q86WK9 346 aa10.72□□□□□ -0.69
VCP-204ENST00000466100 C17orf64Q86WR6 236 aa10.72□□□□□ -0.69
VCP-204ENST00000466100 FAM129CQ86XR2 697 aa10.72□□□□□ -0.69
VCP-204ENST00000466100 SLITRK4Q8IW52 837 aa10.72□□□□□ -0.69
VCP-204ENST00000466100 CARFQ8N187 725 aa10.72□□□□□ -0.69
VCP-204ENST00000466100 SNX31Q8N9S9 440 aa10.72□□□□□ -0.69
VCP-204ENST00000466100 OR4D9Q8NGE8 314 aa10.72□□□□□ -0.69
VCP-204ENST00000466100 TRPC4APQ8TEL6 797 aa10.72□□□□□ -0.69
VCP-204ENST00000466100 AGAP11Q8TF27 550 aa10.72□□□□□ -0.69
VCP-204ENST00000466100 SREK1Q8WXA9 508 aaKnown RBP10.72□□□□□ -0.69
VCP-204ENST00000466100 NCSTNQ92542 709 aa10.72□□□□□ -0.69
VCP-204ENST00000466100 ZNF75CPQ92670 426 aaPredicted RBP10.72□□□□□ -0.69
VCP-204ENST00000466100 AHCYL2Q96HN2 611 aaKnown RBP10.72□□□□□ -0.69
VCP-204ENST00000466100 CNDP1Q96KN2 507 aa10.72□□□□□ -0.69
VCP-204ENST00000466100 TGM7Q96PF1 710 aa10.72□□□□□ -0.69
VCP-204ENST00000466100 SORT1Q99523 831 aa10.72□□□□□ -0.69
VCP-204ENST00000466100 MAP3K3Q99759 626 aa10.72□□□□□ -0.69
VCP-204ENST00000466100 DPYSL5Q9BPU6 564 aa10.72□□□□□ -0.69
VCP-204ENST00000466100 NTMT1Q9BV86 223 aa10.72□□□□□ -0.69
VCP-204ENST00000466100 SPNS1Q9H2V7 528 aa10.72□□□□□ -0.69
VCP-204ENST00000466100 EHD1Q9H4M9 534 aa10.72□□□□□ -0.69
VCP-204ENST00000466100 CCDC134Q9H6E4 229 aa10.72□□□□□ -0.69
VCP-204ENST00000466100 NOL11Q9H8H0 719 aaKnown RBP10.72□□□□□ -0.69
VCP-204ENST00000466100 ZNF395Q9H8N7 513 aaPredicted RBP10.72□□□□□ -0.69
VCP-204ENST00000466100 IPPKQ9H8X2 491 aa10.72□□□□□ -0.69
VCP-204ENST00000466100 PELI2Q9HAT8 420 aa10.72□□□□□ -0.69
VCP-204ENST00000466100 TNFRSF12AQ9NP84 129 aa10.72□□□□□ -0.69
VCP-204ENST00000466100 MRPS30Q9NP92 439 aaKnown RBP10.72□□□□□ -0.69
VCP-204ENST00000466100 C1GALT1Q9NS00 363 aa10.72□□□□□ -0.69
VCP-204ENST00000466100 ABCF3Q9NUQ8 709 aa10.72□□□□□ -0.69
VCP-204ENST00000466100 HAO1Q9UJM8 370 aa10.72□□□□□ -0.69
VCP-204ENST00000466100 DYRK1BQ9Y463 629 aa10.72□□□□□ -0.69
VCP-204ENST00000466100 KCNE2Q9Y6J6 123 aa10.72□□□□□ -0.69
VCP-204ENST00000466100 CEP295Q9C0D2 2601 aa10.71□□□□□ -0.69
VCP-204ENST00000466100 FREM2Q5SZK8 3169 aa10.71□□□□□ -0.69
VCP-204ENST00000466100 IGHV5-51A0A0C4DH38 117 aa10.71□□□□□ -0.69
VCP-204ENST00000466100 OR2A25A4D2G3 310 aa10.71□□□□□ -0.69
VCP-204ENST00000466100 UGDHO60701 494 aa10.71□□□□□ -0.69
VCP-204ENST00000466100 KATNA1O75449 491 aa10.71□□□□□ -0.69
VCP-204ENST00000466100 LYPLA1O75608 230 aaPredicted RBP10.71□□□□□ -0.69
VCP-204ENST00000466100 RFPL3O75679 317 aa10.71□□□□□ -0.69
VCP-204ENST00000466100 MLYCDO95822 493 aa10.71□□□□□ -0.69
VCP-204ENST00000466100 ANKRD34CP0C6C1 535 aa10.71□□□□□ -0.69
VCP-204ENST00000466100 PVRP15151 417 aa10.71□□□□□ -0.69
VCP-204ENST00000466100 ST6GAL1P15907 406 aa10.71□□□□□ -0.69
VCP-204ENST00000466100 MAGP20916 626 aa10.71□□□□□ -0.69
VCP-204ENST00000466100 VARSP26640 1264 aaKnown RBP10.71□□□□□ -0.69
VCP-204ENST00000466100 CMPK1P30085 196 aa10.71□□□□□ -0.69
VCP-204ENST00000466100 MDH1P40925 334 aaKnown RBP10.71□□□□□ -0.69
VCP-204ENST00000466100 ERVPABLB-1P60509 514 aa10.71□□□□□ -0.69
VCP-204ENST00000466100 ABCE1P61221 599 aaKnown RBP10.71□□□□□ -0.69
VCP-204ENST00000466100 SH3BP2P78314 561 aa10.71□□□□□ -0.69
VCP-204ENST00000466100 CSNK1G2P78368 415 aa10.71□□□□□ -0.69
VCP-204ENST00000466100 REEP5Q00765 189 aa10.71□□□□□ -0.69
VCP-204ENST00000466100 OCRLQ01968 901 aa10.71□□□□□ -0.69
VCP-204ENST00000466100 GUCY1A3Q02108 690 aa10.71□□□□□ -0.69
VCP-204ENST00000466100 CHIT1Q13231 466 aa10.71□□□□□ -0.69
VCP-204ENST00000466100 DOC2AQ14183 400 aa10.71□□□□□ -0.69
VCP-204ENST00000466100 GGTA1PQ4G0N0 100 aa10.71□□□□□ -0.69
VCP-204ENST00000466100 ARL13AQ5H913 290 aaPredicted RBP10.71□□□□□ -0.69
VCP-204ENST00000466100 CFAP157Q5JU67 520 aa10.71□□□□□ -0.69
VCP-204ENST00000466100 CATSPEREQ5SY80 951 aa10.71□□□□□ -0.69
VCP-204ENST00000466100 CDCP2Q5VXM1 449 aa10.71□□□□□ -0.69
VCP-204ENST00000466100 FAM219BQ5XKK7 198 aa10.71□□□□□ -0.69
VCP-204ENST00000466100 FCRL6Q6DN72 434 aa10.71□□□□□ -0.69
VCP-204ENST00000466100 ARMC6Q6NXE6 501 aa10.71□□□□□ -0.69
VCP-204ENST00000466100 FAM92BQ6ZTR7 304 aa10.71□□□□□ -0.69
VCP-204ENST00000466100 TMPRSS11BQ86T26 416 aa10.71□□□□□ -0.69
VCP-204ENST00000466100 SYVN1Q86TM6 617 aa10.71□□□□□ -0.69
VCP-204ENST00000466100 PLXDC1Q8IUK5 500 aa10.71□□□□□ -0.69
VCP-204ENST00000466100 TRIM42Q8IWZ5 723 aa10.71□□□□□ -0.69
VCP-204ENST00000466100 DCBLD1Q8N8Z6 715 aa10.71□□□□□ -0.69
VCP-204ENST00000466100 L3MBTL4Q8NA19 623 aa10.71□□□□□ -0.69
VCP-204ENST00000466100 WDR48Q8TAF3 677 aa10.71□□□□□ -0.69
VCP-204ENST00000466100 PPP4R1Q8TF05 950 aa10.71□□□□□ -0.69
VCP-204ENST00000466100 ZDHHC12Q96GR4 267 aa10.71□□□□□ -0.69
VCP-204ENST00000466100 PRR11Q96HE9 360 aaPredicted RBP10.71□□□□□ -0.69
VCP-204ENST00000466100 MAGEB18Q96M61 343 aa10.71□□□□□ -0.69
VCP-204ENST00000466100 TRAPPC9Q96Q05 1148 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms