RNA–Protein interactions for RNA: ENST00000465892.6

TGFBR3-204, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TGFBR3, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-204ENST00000465892 MYDGFQ969H8 173 aa13.54□□□□□ -0.24
TGFBR3-204ENST00000465892 IGSF8Q969P0 613 aa13.54□□□□□ -0.24
TGFBR3-204ENST00000465892 TRIM63Q969Q1 353 aa13.54□□□□□ -0.24
TGFBR3-204ENST00000465892 PPP3R2Q96LZ3 170 aa13.54□□□□□ -0.24
TGFBR3-204ENST00000465892 CPPED1Q9BRF8 314 aaPredicted RBP13.54□□□□□ -0.24
TGFBR3-204ENST00000465892 C1QTNF3Q9BXJ4 246 aa13.54□□□□□ -0.24
TGFBR3-204ENST00000465892 SLA2Q9H6Q3 261 aa13.54□□□□□ -0.24
TGFBR3-204ENST00000465892 SERHLQ9NQF3 203 aa13.54□□□□□ -0.24
TGFBR3-204ENST00000465892 SAMD4AQ9UPU9 718 aaKnown RBP13.54□□□□□ -0.24
TGFBR3-204ENST00000465892 A0A1W2PQH9 124 aa13.53□□□□□ -0.24
TGFBR3-204ENST00000465892 FAM220BPB1ANY3 271 aa13.53□□□□□ -0.24
TGFBR3-204ENST00000465892 FAM25AB3EWG3 89 aa13.53□□□□□ -0.24
TGFBR3-204ENST00000465892 FAM25CB3EWG5 89 aa13.53□□□□□ -0.24
TGFBR3-204ENST00000465892 FAM25GB3EWG6 89 aa13.53□□□□□ -0.24
TGFBR3-204ENST00000465892 HAS3O00219 553 aa13.53□□□□□ -0.24
TGFBR3-204ENST00000465892 GLUD1P00367 558 aa13.53□□□□□ -0.24
TGFBR3-204ENST00000465892 IGLV3-25P01717 112 aa13.53□□□□□ -0.24
TGFBR3-204ENST00000465892 BCKDHAP12694 445 aa13.53□□□□□ -0.24
TGFBR3-204ENST00000465892 IL7P13232 177 aa13.53□□□□□ -0.24
TGFBR3-204ENST00000465892 OGNP20774 298 aaKnown RBP13.53□□□□□ -0.24
TGFBR3-204ENST00000465892 HOXC13P31276 330 aa13.53□□□□□ -0.24
TGFBR3-204ENST00000465892 S100A3P33764 101 aa13.53□□□□□ -0.24
TGFBR3-204ENST00000465892 RPS19P39019 145 aaKnown RBP13.53□□□□□ -0.24
TGFBR3-204ENST00000465892 MAGEA2P43356 314 aa13.53□□□□□ -0.24
TGFBR3-204ENST00000465892 GNPDA1P46926 289 aa13.53□□□□□ -0.24
TGFBR3-204ENST00000465892 LHX1P48742 406 aa13.53□□□□□ -0.24
TGFBR3-204ENST00000465892 NKX3-2P78367 333 aa13.53□□□□□ -0.24
TGFBR3-204ENST00000465892 MBOAT1Q6ZNC8 495 aa13.53□□□□□ -0.24
TGFBR3-204ENST00000465892 CAMKK1Q8N5S9 505 aa13.53□□□□□ -0.24
TGFBR3-204ENST00000465892 SPERTQ8NA61 448 aa13.53□□□□□ -0.24
TGFBR3-204ENST00000465892 PPTC7Q8NI37 304 aa13.53□□□□□ -0.24
TGFBR3-204ENST00000465892 TMCO6Q96DC7 493 aa13.53□□□□□ -0.24
TGFBR3-204ENST00000465892 FEVQ99581 238 aa13.53□□□□□ -0.24
TGFBR3-204ENST00000465892 CLMPQ9H6B4 373 aa13.53□□□□□ -0.24
TGFBR3-204ENST00000465892 LRTM1Q9HBL6 345 aa13.53□□□□□ -0.24
TGFBR3-204ENST00000465892 STMN3Q9NZ72 180 aa13.53□□□□□ -0.24
TGFBR3-204ENST00000465892 CCDC59Q9P031 241 aaKnown RBP13.53□□□□□ -0.24
TGFBR3-204ENST00000465892 DNAJC25-GNG10A0A024R161 153 aa13.53□□□□□ -0.24
TGFBR3-204ENST00000465892 HMX3A6NHT5 357 aa13.53□□□□□ -0.24
TGFBR3-204ENST00000465892 TEX28O15482 410 aa13.53□□□□□ -0.24
TGFBR3-204ENST00000465892 RGS14O43566 566 aa13.53□□□□□ -0.24
TGFBR3-204ENST00000465892 OR4Q2P0C623 313 aa13.53□□□□□ -0.24
TGFBR3-204ENST00000465892 ACVR1Q04771 509 aa13.53□□□□□ -0.24
TGFBR3-204ENST00000465892 TIGD5Q53EQ6 642 aa13.53□□□□□ -0.24
TGFBR3-204ENST00000465892 ATG9BQ674R7 924 aa13.53□□□□□ -0.24
TGFBR3-204ENST00000465892 OR4F3Q6IEY1 312 aa13.53□□□□□ -0.24
TGFBR3-204ENST00000465892 CALHM3Q86XJ0 350 aa13.53□□□□□ -0.24
TGFBR3-204ENST00000465892 CCDC28AQ8IWP9 274 aa13.53□□□□□ -0.24
TGFBR3-204ENST00000465892 IQCF2Q8IXL9 164 aa13.53□□□□□ -0.24
TGFBR3-204ENST00000465892 TMEM132CQ8N3T6 1108 aa13.53□□□□□ -0.24
TGFBR3-204ENST00000465892 GRPEL2Q8TAA5 225 aa13.53□□□□□ -0.24
TGFBR3-204ENST00000465892 GPR152Q8TDT2 470 aa13.53□□□□□ -0.24
TGFBR3-204ENST00000465892 CCDC120Q96HB5 630 aa13.53□□□□□ -0.24
TGFBR3-204ENST00000465892 UCK2Q9BZX2 261 aa13.53□□□□□ -0.24
TGFBR3-204ENST00000465892 ELP3Q9H9T3 547 aa13.53□□□□□ -0.24
TGFBR3-204ENST00000465892 ACOXLQ9NUZ1 547 aa13.53□□□□□ -0.24
TGFBR3-204ENST00000465892 MS4A12Q9NXJ0 267 aa13.53□□□□□ -0.24
TGFBR3-204ENST00000465892 ERVW-1Q9UQF0 538 aa13.53□□□□□ -0.24
TGFBR3-204ENST00000465892 A0A0B4J293 547 aa13.53□□□□□ -0.24
TGFBR3-204ENST00000465892 WWP2O00308 870 aa13.53□□□□□ -0.24
TGFBR3-204ENST00000465892 IFRD1O00458 451 aaPredicted RBP13.53□□□□□ -0.24
TGFBR3-204ENST00000465892 RFXANKO14593 260 aa13.53□□□□□ -0.24
TGFBR3-204ENST00000465892 GPX5O75715 221 aa13.53□□□□□ -0.24
TGFBR3-204ENST00000465892 CCNDBP1O95273 360 aa13.53□□□□□ -0.24
TGFBR3-204ENST00000465892 CCNYL3P0C7X3 344 aa13.53□□□□□ -0.24
TGFBR3-204ENST00000465892 MC4RP32245 332 aa13.53□□□□□ -0.24
TGFBR3-204ENST00000465892 SOX3P41225 446 aa13.53□□□□□ -0.24
TGFBR3-204ENST00000465892 ZNF79Q15937 498 aa13.53□□□□□ -0.24
TGFBR3-204ENST00000465892 SCD5Q86SK9 330 aa13.53□□□□□ -0.24
TGFBR3-204ENST00000465892 ZNF557Q8N988 423 aaPredicted RBP13.53□□□□□ -0.24
TGFBR3-204ENST00000465892 FCGR1BQ92637 280 aa13.53□□□□□ -0.24
TGFBR3-204ENST00000465892 MAL2Q969L2 176 aa13.53□□□□□ -0.24
TGFBR3-204ENST00000465892 OMA1Q96E52 524 aa13.53□□□□□ -0.24
TGFBR3-204ENST00000465892 RNF31Q96EP0 1072 aa13.53□□□□□ -0.24
TGFBR3-204ENST00000465892 GDF15Q99988 308 aa13.53□□□□□ -0.24
TGFBR3-204ENST00000465892 BARHL1Q9BZE3 327 aa13.53□□□□□ -0.24
TGFBR3-204ENST00000465892 POLR1EQ9GZS1 481 aaKnown RBP13.53□□□□□ -0.24
TGFBR3-204ENST00000465892 NARFLQ9H6Q4 476 aa13.53□□□□□ -0.24
TGFBR3-204ENST00000465892 ELOVL2Q9NXB9 296 aa13.53□□□□□ -0.24
TGFBR3-204ENST00000465892 TRBV5-3A0A0A0MS03 114 aa13.52□□□□□ -0.24
TGFBR3-204ENST00000465892 CCDC182A6NF36 153 aa13.52□□□□□ -0.24
TGFBR3-204ENST00000465892 LOC730098B7Z3J9 87 aa13.52□□□□□ -0.24
TGFBR3-204ENST00000465892 ITGA2P17301 1181 aa13.52□□□□□ -0.24
TGFBR3-204ENST00000465892 HOXB8P17481 243 aaPredicted RBP13.52□□□□□ -0.24
TGFBR3-204ENST00000465892 EIF4EBP2Q13542 120 aaPredicted RBP13.52□□□□□ -0.24
TGFBR3-204ENST00000465892 ZNF621Q6ZSS3 439 aa13.52□□□□□ -0.24
TGFBR3-204ENST00000465892 VN1R5Q7Z5H4 357 aa13.52□□□□□ -0.24
TGFBR3-204ENST00000465892 ABI3BPQ7Z7G0 1075 aa13.52□□□□□ -0.24
TGFBR3-204ENST00000465892 ZNF605Q86T29 641 aa13.52□□□□□ -0.24
TGFBR3-204ENST00000465892 CFAP52Q8N1V2 620 aa13.52□□□□□ -0.24
TGFBR3-204ENST00000465892 HRASLS5Q96KN8 279 aa13.52□□□□□ -0.24
TGFBR3-204ENST00000465892 MGLLQ99685 303 aa13.52□□□□□ -0.24
TGFBR3-204ENST00000465892 RTP3Q9BQQ7 232 aa13.52□□□□□ -0.24
TGFBR3-204ENST00000465892 GABARAPL1Q9H0R8 117 aa13.52□□□□□ -0.24
TGFBR3-204ENST00000465892 SMURF1Q9HCE7 757 aa13.52□□□□□ -0.24
TGFBR3-204ENST00000465892 ABCC13Q9NSE7 274 aa13.52□□□□□ -0.24
TGFBR3-204ENST00000465892 USP34Q70CQ2 3546 aa13.52□□□□□ -0.25
TGFBR3-204ENST00000465892 FFAR2O15552 330 aa13.52□□□□□ -0.25
TGFBR3-204ENST00000465892 ERN1O75460 977 aaKnown RBP13.52□□□□□ -0.25
TGFBR3-204ENST00000465892 SNX4O95219 450 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms