RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 TSNQ15631 228 aaKnown RBP16.83■□□□□ 0.28
CPSF4-209ENST00000465132 SULT1C3Q6IMI6 304 aa16.83■□□□□ 0.28
CPSF4-209ENST00000465132 DUS1LQ6P1R4 473 aaKnown RBP16.83■□□□□ 0.28
CPSF4-209ENST00000465132 RASGRP3Q8IV61 690 aa16.83■□□□□ 0.28
CPSF4-209ENST00000465132 SYTL1Q8IYJ3 562 aa16.83■□□□□ 0.28
CPSF4-209ENST00000465132 CENPLQ8N0S6 344 aaPredicted RBP16.83■□□□□ 0.28
CPSF4-209ENST00000465132 OR4E2Q8NGC2 313 aa16.83■□□□□ 0.28
CPSF4-209ENST00000465132 OR2L8Q8NGY9 312 aa16.83■□□□□ 0.28
CPSF4-209ENST00000465132 HMGCLL1Q8TB92 370 aa16.83■□□□□ 0.28
CPSF4-209ENST00000465132 NXNL1Q96CM4 212 aa16.83■□□□□ 0.28
CPSF4-209ENST00000465132 CCDC126Q96EE4 140 aa16.83■□□□□ 0.28
CPSF4-209ENST00000465132 CD180Q99467 661 aa16.83■□□□□ 0.28
CPSF4-209ENST00000465132 EFHD1Q9BUP0 239 aa16.83■□□□□ 0.28
CPSF4-209ENST00000465132 ALG9Q9H6U8 611 aa16.83■□□□□ 0.28
CPSF4-209ENST00000465132 APMAPQ9HDC9 416 aa16.83■□□□□ 0.28
CPSF4-209ENST00000465132 IGSF5Q9NSI5 407 aa16.83■□□□□ 0.28
CPSF4-209ENST00000465132 CD274Q9NZQ7 290 aa16.83■□□□□ 0.28
CPSF4-209ENST00000465132 TMEM184BQ9Y519 407 aaPredicted RBP16.83■□□□□ 0.28
CPSF4-209ENST00000465132 PIPSLA2A3N6 862 aa16.82■□□□□ 0.28
CPSF4-209ENST00000465132 CDC7O00311 574 aa16.82■□□□□ 0.28
CPSF4-209ENST00000465132 STK17BO94768 372 aa16.82■□□□□ 0.28
CPSF4-209ENST00000465132 CCNDBP1O95273 360 aa16.82■□□□□ 0.28
CPSF4-209ENST00000465132 PRKAR1AP10644 381 aa16.82■□□□□ 0.28
CPSF4-209ENST00000465132 PKLRP30613 574 aa16.82■□□□□ 0.28
CPSF4-209ENST00000465132 CRHR1P34998 444 aa16.82■□□□□ 0.28
CPSF4-209ENST00000465132 BDKRB1P46663 353 aa16.82■□□□□ 0.28
CPSF4-209ENST00000465132 CAPZBP47756 277 aa16.82■□□□□ 0.28
CPSF4-209ENST00000465132 PNLIPRP1P54315 467 aa16.82■□□□□ 0.28
CPSF4-209ENST00000465132 SLC18A2Q05940 514 aa16.82■□□□□ 0.28
CPSF4-209ENST00000465132 ABHD18Q0P651 414 aa16.82■□□□□ 0.28
CPSF4-209ENST00000465132 CDC20Q12834 499 aa16.82■□□□□ 0.28
CPSF4-209ENST00000465132 TGFBIQ15582 683 aa16.82■□□□□ 0.28
CPSF4-209ENST00000465132 METTL2BQ6P1Q9 378 aaKnown RBP16.82■□□□□ 0.28
CPSF4-209ENST00000465132 SBSNQ6UWP8 590 aa16.82■□□□□ 0.28
CPSF4-209ENST00000465132 ISCA2Q86U28 154 aa16.82■□□□□ 0.28
CPSF4-209ENST00000465132 CYP4X1Q8N118 509 aa16.82■□□□□ 0.28
CPSF4-209ENST00000465132 RDH11Q8TC12 318 aa16.82■□□□□ 0.28
CPSF4-209ENST00000465132 FBXL8Q96CD0 374 aa16.82■□□□□ 0.28
CPSF4-209ENST00000465132 APOPT1Q96IL0 206 aa16.82■□□□□ 0.28
CPSF4-209ENST00000465132 TBC1D10AQ9BXI6 508 aa16.82■□□□□ 0.28
CPSF4-209ENST00000465132 HRASLS2Q9NWW9 162 aa16.82■□□□□ 0.28
CPSF4-209ENST00000465132 UTP6Q9NYH9 597 aaKnown RBP16.82■□□□□ 0.28
CPSF4-209ENST00000465132 EPHA6Q9UF33 1036 aa16.82■□□□□ 0.28
CPSF4-209ENST00000465132 KLHL3Q9UH77 587 aa16.82■□□□□ 0.28
CPSF4-209ENST00000465132 TNPO3Q9Y5L0 923 aaKnown RBP16.82■□□□□ 0.28
CPSF4-209ENST00000465132 A0A1W2PPM1 405 aa16.81■□□□□ 0.28
CPSF4-209ENST00000465132 OR6C74A6NCV1 312 aa16.81■□□□□ 0.28
CPSF4-209ENST00000465132 OR5K3A6NET4 321 aa16.81■□□□□ 0.28
CPSF4-209ENST00000465132 GOLGA8RI6L899 631 aa16.81■□□□□ 0.28
CPSF4-209ENST00000465132 TOX3O15405 576 aaPredicted RBP16.81■□□□□ 0.28
CPSF4-209ENST00000465132 NAA20P61599 178 aa16.81■□□□□ 0.28
CPSF4-209ENST00000465132 IRF9Q00978 393 aa16.81■□□□□ 0.28
CPSF4-209ENST00000465132 ASPHQ12797 758 aa16.81■□□□□ 0.28
CPSF4-209ENST00000465132 CYP2A13Q16696 494 aa16.81■□□□□ 0.28
CPSF4-209ENST00000465132 PPP1R3AQ16821 1122 aa16.81■□□□□ 0.28
CPSF4-209ENST00000465132 HSP90B2PQ58FF3 399 aa16.81■□□□□ 0.28
CPSF4-209ENST00000465132 COLEC12Q5KU26 742 aa16.81■□□□□ 0.28
CPSF4-209ENST00000465132 AGBL2Q5U5Z8 902 aa16.81■□□□□ 0.28
CPSF4-209ENST00000465132 CAPN13Q6MZZ7 669 aaPredicted RBP16.81■□□□□ 0.28
CPSF4-209ENST00000465132 SPATA6LQ8N4H0 392 aa16.81■□□□□ 0.28
CPSF4-209ENST00000465132 PKP4Q99569 1192 aa16.81■□□□□ 0.28
CPSF4-209ENST00000465132 MIPEPQ99797 713 aa16.81■□□□□ 0.28
CPSF4-209ENST00000465132 CAPS2Q9BXY5 557 aa16.81■□□□□ 0.28
CPSF4-209ENST00000465132 EPN3Q9H201 632 aa16.81■□□□□ 0.28
CPSF4-209ENST00000465132 INTS7Q9NVH2 962 aaKnown RBP16.81■□□□□ 0.28
CPSF4-209ENST00000465132 ADAMTS6Q9UKP5 1117 aa16.81■□□□□ 0.28
CPSF4-209ENST00000465132 MN1Q10571 1320 aaPredicted RBP16.8■□□□□ 0.28
CPSF4-209ENST00000465132 GSAPA4D1B5 854 aa16.8■□□□□ 0.28
CPSF4-209ENST00000465132 SUPT3HB4E1H0 165 aa16.8■□□□□ 0.28
CPSF4-209ENST00000465132 MAP2K7O14733 419 aa16.8■□□□□ 0.28
CPSF4-209ENST00000465132 POLR1CO15160 346 aaPredicted RBP16.8■□□□□ 0.28
CPSF4-209ENST00000465132 SUPT3HO75486 399 aa16.8■□□□□ 0.28
CPSF4-209ENST00000465132 DLGAP3O95886 979 aa16.8■□□□□ 0.28
CPSF4-209ENST00000465132 SLC16A8O95907 504 aa16.8■□□□□ 0.28
CPSF4-209ENST00000465132 ANKRD34CP0C6C1 535 aa16.8■□□□□ 0.28
CPSF4-209ENST00000465132 GFAPP14136 432 aa16.8■□□□□ 0.28
CPSF4-209ENST00000465132 HRH2P25021 359 aa16.8■□□□□ 0.28
CPSF4-209ENST00000465132 OAS2P29728 719 aaKnown RBP16.8■□□□□ 0.28
CPSF4-209ENST00000465132 RPA3P35244 121 aaPredicted RBP16.8■□□□□ 0.28
CPSF4-209ENST00000465132 CASRP41180 1078 aa16.8■□□□□ 0.28
CPSF4-209ENST00000465132 GLRBP48167 497 aa16.8■□□□□ 0.28
CPSF4-209ENST00000465132 PGGT1BP53609 377 aa16.8■□□□□ 0.28
CPSF4-209ENST00000465132 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.8■□□□□ 0.28
CPSF4-209ENST00000465132 CYB5D1Q6P9G0 228 aa16.8■□□□□ 0.28
CPSF4-209ENST00000465132 SLC22A9Q8IVM8 553 aa16.8■□□□□ 0.28
CPSF4-209ENST00000465132 CCDC63Q8NA47 563 aa16.8■□□□□ 0.28
CPSF4-209ENST00000465132 C9orf43Q8TAL5 461 aaPredicted RBP16.8■□□□□ 0.28
CPSF4-209ENST00000465132 HAUS8Q9BT25 410 aa16.8■□□□□ 0.28
CPSF4-209ENST00000465132 TMBIM4Q9HC24 238 aa16.8■□□□□ 0.28
CPSF4-209ENST00000465132 CCDC177Q9NQR7 707 aaPredicted RBP16.8■□□□□ 0.28
CPSF4-209ENST00000465132 SIDT1Q9NXL6 827 aaKnown RBP16.8■□□□□ 0.28
CPSF4-209ENST00000465132 ICKQ9UPZ9 632 aa16.8■□□□□ 0.28
CPSF4-209ENST00000465132 ANKRD12Q6UB98 2062 aa16.8■□□□□ 0.28
CPSF4-209ENST00000465132 HMGB1P1B2RPK0 211 aaPredicted RBP16.79■□□□□ 0.28
CPSF4-209ENST00000465132 GUCA1CO95843 209 aa16.79■□□□□ 0.28
CPSF4-209ENST00000465132 CHRM5P08912 532 aaPredicted RBP16.79■□□□□ 0.28
CPSF4-209ENST00000465132 ERGP11308 486 aa16.79■□□□□ 0.28
CPSF4-209ENST00000465132 STAT5AP42229 794 aa16.79■□□□□ 0.28
CPSF4-209ENST00000465132 PIK3CGP48736 1102 aa16.79■□□□□ 0.28
CPSF4-209ENST00000465132 ALDH18A1P54886 795 aaKnown RBP16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms