RNA–Protein interactions for RNA: ENST00000464987.5

TSPAN4-210, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 2,205 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-210ENST00000464987 ST13P5Q8NFI4 369 aaPredicted RBP18.1■□□□□ 0.49
TSPAN4-210ENST00000464987 POF1BQ8WVV4 589 aa18.1■□□□□ 0.49
TSPAN4-210ENST00000464987 SDCCAG3Q96C92 435 aa18.1■□□□□ 0.49
TSPAN4-210ENST00000464987 PYURFQ96I23 114 aa18.1■□□□□ 0.49
TSPAN4-210ENST00000464987 FCRL1Q96LA6 429 aa18.1■□□□□ 0.49
TSPAN4-210ENST00000464987 SAMD11Q96NU1 681 aa18.1■□□□□ 0.49
TSPAN4-210ENST00000464987 PANX1Q96RD7 426 aa18.1■□□□□ 0.49
TSPAN4-210ENST00000464987 ZSCAN5AQ9BUG6 496 aa18.1■□□□□ 0.49
TSPAN4-210ENST00000464987 ING2Q9H160 280 aa18.1■□□□□ 0.49
TSPAN4-210ENST00000464987 IRAK3Q9Y616 596 aa18.1■□□□□ 0.49
TSPAN4-210ENST00000464987 TSPAN11A1L157 253 aa18.1■□□□□ 0.49
TSPAN4-210ENST00000464987 MAGEB17A8MXT2 336 aa18.1■□□□□ 0.49
TSPAN4-210ENST00000464987 FPGTO14772 594 aa18.1■□□□□ 0.49
TSPAN4-210ENST00000464987 NPC1O15118 1278 aa18.1■□□□□ 0.49
TSPAN4-210ENST00000464987 HS6ST1O60243 411 aa18.1■□□□□ 0.49
TSPAN4-210ENST00000464987 AP2A2O94973 939 aa18.1■□□□□ 0.49
TSPAN4-210ENST00000464987 XPAP23025 273 aaPredicted RBP18.1■□□□□ 0.49
TSPAN4-210ENST00000464987 IMPA1P29218 277 aa18.1■□□□□ 0.49
TSPAN4-210ENST00000464987 TMEM115Q12893 351 aaPredicted RBP18.1■□□□□ 0.49
TSPAN4-210ENST00000464987 DMC1Q14565 340 aa18.1■□□□□ 0.49
TSPAN4-210ENST00000464987 ACOX1Q15067 660 aa18.1■□□□□ 0.49
TSPAN4-210ENST00000464987 ARHGAP15Q53QZ3 475 aa18.1■□□□□ 0.49
TSPAN4-210ENST00000464987 ZNF805Q5CZA5 627 aa18.1■□□□□ 0.49
TSPAN4-210ENST00000464987 PARS2Q7L3T8 475 aaKnown RBP18.1■□□□□ 0.49
TSPAN4-210ENST00000464987 DNAJB8Q8NHS0 232 aa18.1■□□□□ 0.49
TSPAN4-210ENST00000464987 GLYATL1Q969I3 302 aa18.1■□□□□ 0.49
TSPAN4-210ENST00000464987 TMEM159Q96B96 161 aa18.1■□□□□ 0.49
TSPAN4-210ENST00000464987 PKP4Q99569 1192 aa18.1■□□□□ 0.49
TSPAN4-210ENST00000464987 DPH2Q9BQC3 489 aaPredicted RBP18.1■□□□□ 0.49
TSPAN4-210ENST00000464987 ADNPQ9H2P0 1102 aa18.1■□□□□ 0.49
TSPAN4-210ENST00000464987 EXD2Q9NVH0 621 aa18.1■□□□□ 0.49
TSPAN4-210ENST00000464987 VPS29Q9UBQ0 182 aa18.1■□□□□ 0.49
TSPAN4-210ENST00000464987 REV3LO60673 3130 aa18.1■□□□□ 0.49
TSPAN4-210ENST00000464987 SERTM1A2A2V5 107 aa18.09■□□□□ 0.49
TSPAN4-210ENST00000464987 CLIC1O00299 241 aa18.09■□□□□ 0.49
TSPAN4-210ENST00000464987 CPSF4O95639 269 aaKnown RBP18.09■□□□□ 0.49
TSPAN4-210ENST00000464987 ZNF682O95780 498 aa18.09■□□□□ 0.49
TSPAN4-210ENST00000464987 HPRP00739 348 aa18.09■□□□□ 0.49
TSPAN4-210ENST00000464987 ELFN1P0C7U0 828 aa18.09■□□□□ 0.49
TSPAN4-210ENST00000464987 ENGP17813 658 aa18.09■□□□□ 0.49
TSPAN4-210ENST00000464987 MMP12P39900 470 aa18.09■□□□□ 0.49
TSPAN4-210ENST00000464987 MAPK10P53779 464 aa18.09■□□□□ 0.49
TSPAN4-210ENST00000464987 MEP1AQ16819 746 aa18.09■□□□□ 0.49
TSPAN4-210ENST00000464987 CTU2Q2VPK5 515 aaKnown RBP18.09■□□□□ 0.49
TSPAN4-210ENST00000464987 ZNF284Q2VY69 593 aa18.09■□□□□ 0.49
TSPAN4-210ENST00000464987 TMEM220Q6QAJ8 160 aa18.09■□□□□ 0.49
TSPAN4-210ENST00000464987 ZNF621Q6ZSS3 439 aa18.09■□□□□ 0.49
TSPAN4-210ENST00000464987 DPPA4Q7L190 304 aa18.09■□□□□ 0.49
TSPAN4-210ENST00000464987 THAP5Q7Z6K1 395 aa18.09■□□□□ 0.49
TSPAN4-210ENST00000464987 ZCCHC7Q8N3Z6 543 aaKnown RBP18.09■□□□□ 0.49
TSPAN4-210ENST00000464987 CSGALNACT1Q8TDX6 532 aa18.09■□□□□ 0.49
TSPAN4-210ENST00000464987 NELL1Q92832 810 aa18.09■□□□□ 0.49
TSPAN4-210ENST00000464987 AP2M1Q96CW1 435 aa18.09■□□□□ 0.49
TSPAN4-210ENST00000464987 SPATA6Q9NWH7 488 aaPredicted RBP18.09■□□□□ 0.49
TSPAN4-210ENST00000464987 IRAK4Q9NWZ3 460 aa18.09■□□□□ 0.49
TSPAN4-210ENST00000464987 FBXO10Q9UK96 956 aa18.09■□□□□ 0.49
TSPAN4-210ENST00000464987 ABCG2Q9UNQ0 655 aa18.09■□□□□ 0.49
TSPAN4-210ENST00000464987 SLC5A10A0PJK1 596 aa18.08■□□□□ 0.49
TSPAN4-210ENST00000464987 FOXD2O60548 495 aaPredicted RBP18.08■□□□□ 0.49
TSPAN4-210ENST00000464987 E2F6O75461 281 aa18.08■□□□□ 0.49
TSPAN4-210ENST00000464987 DIRAS1O95057 198 aa18.08■□□□□ 0.49
TSPAN4-210ENST00000464987 LAMP1P11279 417 aa18.08■□□□□ 0.49
TSPAN4-210ENST00000464987 COX7A2P14406 83 aa18.08■□□□□ 0.49
TSPAN4-210ENST00000464987 CEBPBP17676 345 aa18.08■□□□□ 0.49
TSPAN4-210ENST00000464987 AGXTP21549 392 aa18.08■□□□□ 0.49
TSPAN4-210ENST00000464987 DDX6P26196 483 aaKnown RBP eCLIP18.08■□□□□ 0.492e-8■■■■■ 27
TSPAN4-210ENST00000464987 NNMTP40261 264 aa18.08■□□□□ 0.49
TSPAN4-210ENST00000464987 STT3AP46977 705 aa18.08■□□□□ 0.49
TSPAN4-210ENST00000464987 RAE1P78406 368 aaKnown RBP18.08■□□□□ 0.49
TSPAN4-210ENST00000464987 PIGFQ07326 219 aa18.08■□□□□ 0.49
TSPAN4-210ENST00000464987 DUOXA1Q1HG43 343 aa18.08■□□□□ 0.49
TSPAN4-210ENST00000464987 PRSS36Q5K4E3 855 aa18.08■□□□□ 0.49
TSPAN4-210ENST00000464987 ZCCHC8Q6NZY4 707 aaKnown RBP18.08■□□□□ 0.49
TSPAN4-210ENST00000464987 R3HCC1LQ7Z5L2 792 aaKnown RBP18.08■□□□□ 0.49
TSPAN4-210ENST00000464987 C8orf59Q8N0T1 100 aaPredicted RBP18.08■□□□□ 0.49
TSPAN4-210ENST00000464987 VN1R2Q8NFZ6 395 aa18.08■□□□□ 0.49
TSPAN4-210ENST00000464987 PJA1Q8NG27 643 aa18.08■□□□□ 0.49
TSPAN4-210ENST00000464987 GAB3Q8WWW8 586 aa18.08■□□□□ 0.49
TSPAN4-210ENST00000464987 C11orf49Q9H6J7 331 aa18.08■□□□□ 0.49
TSPAN4-210ENST00000464987 AASDHPPTQ9NRN7 309 aa18.08■□□□□ 0.49
TSPAN4-210ENST00000464987 TBC1D14Q9P2M4 693 aa18.08■□□□□ 0.49
TSPAN4-210ENST00000464987 TMEFF2Q9UIK5 374 aaPredicted RBP18.08■□□□□ 0.49
TSPAN4-210ENST00000464987 K7ESM1 405 aa18.08■□□□□ 0.48
TSPAN4-210ENST00000464987 PLK4O00444 970 aa18.08■□□□□ 0.48
TSPAN4-210ENST00000464987 PRPS1L1P21108 318 aa18.08■□□□□ 0.48
TSPAN4-210ENST00000464987 CTNNB1P35222 781 aa18.08■□□□□ 0.48
TSPAN4-210ENST00000464987 PRLHRP49683 370 aa18.08■□□□□ 0.48
TSPAN4-210ENST00000464987 LAIR2Q6ISS4 152 aa18.08■□□□□ 0.48
TSPAN4-210ENST00000464987 ADHFE1Q8IWW8 467 aa18.08■□□□□ 0.48
TSPAN4-210ENST00000464987 SVOPLQ8N434 492 aa18.08■□□□□ 0.48
TSPAN4-210ENST00000464987 OR5K1Q8NHB7 308 aa18.08■□□□□ 0.48
TSPAN4-210ENST00000464987 ERLEC1Q96DZ1 483 aa18.08■□□□□ 0.48
TSPAN4-210ENST00000464987 C11orf24Q96F05 449 aaPredicted RBP18.08■□□□□ 0.48
TSPAN4-210ENST00000464987 RBM4BQ9BQ04 359 aaKnown RBP18.08■□□□□ 0.48
TSPAN4-210ENST00000464987 RBM4Q9BWF3 364 aaKnown RBP18.08■□□□□ 0.48
TSPAN4-210ENST00000464987 MAGIXQ9H6Y5 334 aa18.08■□□□□ 0.48
TSPAN4-210ENST00000464987 SGK2Q9HBY8 427 aa18.08■□□□□ 0.48
TSPAN4-210ENST00000464987 USE1Q9NZ43 259 aa18.08■□□□□ 0.48
TSPAN4-210ENST00000464987 AP3M1Q9Y2T2 418 aa18.08■□□□□ 0.48
TSPAN4-210ENST00000464987 H3BMQ9 156 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms