RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 TMEM30BQ3MIR4 351 aa3.72□□□□□ -1.81
CLK1-208ENST00000464454 TXNRD3NBQ6F5E7 133 aa3.72□□□□□ -1.81
CLK1-208ENST00000464454 IQCA1Q86XH1 822 aa3.72□□□□□ -1.81
CLK1-208ENST00000464454 WDSUB1Q8N9V3 476 aa3.72□□□□□ -1.81
CLK1-208ENST00000464454 NHLRC2Q8NBF2 726 aa3.72□□□□□ -1.81
CLK1-208ENST00000464454 ATAD1Q8NBU5 361 aa3.72□□□□□ -1.81
CLK1-208ENST00000464454 ST6GALNAC6Q969X2 333 aa3.72□□□□□ -1.81
CLK1-208ENST00000464454 BSCL2Q96G97 398 aaPredicted RBP3.72□□□□□ -1.81
CLK1-208ENST00000464454 ZNF696Q9H7X3 374 aa3.72□□□□□ -1.81
CLK1-208ENST00000464454 MINDY3Q9H8M7 445 aa3.72□□□□□ -1.81
CLK1-208ENST00000464454 CHST11Q9NPF2 352 aa3.72□□□□□ -1.81
CLK1-208ENST00000464454 SLC52A3Q9NQ40 469 aa3.72□□□□□ -1.81
CLK1-208ENST00000464454 P4HTMQ9NXG6 502 aa3.72□□□□□ -1.81
CLK1-208ENST00000464454 CHKBQ9Y259 395 aa3.72□□□□□ -1.81
CLK1-208ENST00000464454 IGHV4-61A0A0C4DH41 118 aa3.71□□□□□ -1.82
CLK1-208ENST00000464454 O00370 1275 aa3.71□□□□□ -1.82
CLK1-208ENST00000464454 PPIP5K2O43314 1243 aa3.71□□□□□ -1.82
CLK1-208ENST00000464454 PRAF2O60831 178 aa3.71□□□□□ -1.82
CLK1-208ENST00000464454 FCGR3BO75015 233 aa3.71□□□□□ -1.82
CLK1-208ENST00000464454 DFFBO76075 338 aa3.71□□□□□ -1.82
CLK1-208ENST00000464454 IGHV4-59P01825 116 aa3.71□□□□□ -1.82
CLK1-208ENST00000464454 C9P02748 559 aa3.71□□□□□ -1.82
CLK1-208ENST00000464454 SUPT20HL2P0C7V6 817 aa3.71□□□□□ -1.82
CLK1-208ENST00000464454 PRSS56P0CW18 603 aa3.71□□□□□ -1.82
CLK1-208ENST00000464454 PSMB4P28070 264 aa3.71□□□□□ -1.82
CLK1-208ENST00000464454 CHRNB4P30926 498 aa3.71□□□□□ -1.82
CLK1-208ENST00000464454 TIA1P31483 386 aaKnown RBP eCLIP3.71□□□□□ -1.826e-7■■□□□ 13.4
CLK1-208ENST00000464454 CDX1P47902 265 aaPredicted RBP3.71□□□□□ -1.82
CLK1-208ENST00000464454 KCNJ10P78508 379 aa3.71□□□□□ -1.82
CLK1-208ENST00000464454 PMP22Q01453 160 aa3.71□□□□□ -1.82
CLK1-208ENST00000464454 SULT2A1Q06520 285 aa3.71□□□□□ -1.82
CLK1-208ENST00000464454 RASGEF1BQ0VAM2 473 aa3.71□□□□□ -1.82
CLK1-208ENST00000464454 GPR17Q13304 367 aa3.71□□□□□ -1.82
CLK1-208ENST00000464454 HERC3Q15034 1050 aa3.71□□□□□ -1.82
CLK1-208ENST00000464454 TAZQ16635 292 aa3.71□□□□□ -1.82
CLK1-208ENST00000464454 MEP1BQ16820 701 aa3.71□□□□□ -1.82
CLK1-208ENST00000464454 MRGPRG-AS1Q2M3A8 158 aa3.71□□□□□ -1.82
CLK1-208ENST00000464454 KIAA1644Q3SXP7 199 aa3.71□□□□□ -1.82
CLK1-208ENST00000464454 ANKRD20A4Q4UJ75 823 aa3.71□□□□□ -1.82
CLK1-208ENST00000464454 PDLIM3Q53GG5 364 aaPredicted RBP3.71□□□□□ -1.82
CLK1-208ENST00000464454 LBHQ53QV2 105 aaPredicted RBP3.71□□□□□ -1.82
CLK1-208ENST00000464454 ANKRD20A8PQ5CZ79 823 aa3.71□□□□□ -1.82
CLK1-208ENST00000464454 ANKRD20A2Q5SQ80 823 aa3.71□□□□□ -1.82
CLK1-208ENST00000464454 CEP85LQ5SZL2 805 aa3.71□□□□□ -1.82
CLK1-208ENST00000464454 ANKRD20A1Q5TYW2 823 aa3.71□□□□□ -1.82
CLK1-208ENST00000464454 ANKRD20A3Q5VUR7 823 aa3.71□□□□□ -1.82
CLK1-208ENST00000464454 ARHGAP11AQ6P4F7 1023 aa3.71□□□□□ -1.82
CLK1-208ENST00000464454 HOOK3Q86VS8 718 aa3.71□□□□□ -1.82
CLK1-208ENST00000464454 APLFQ8IW19 511 aaPredicted RBP3.71□□□□□ -1.82
CLK1-208ENST00000464454 OR10Q1Q8NGQ4 319 aa3.71□□□□□ -1.82
CLK1-208ENST00000464454 OR13C3Q8NGS6 347 aa3.71□□□□□ -1.82
CLK1-208ENST00000464454 SLC26A7Q8TE54 656 aa3.71□□□□□ -1.82
CLK1-208ENST00000464454 AFAP1L1Q8TED9 768 aa3.71□□□□□ -1.82
CLK1-208ENST00000464454 SEPT1Q8WYJ6 367 aa3.71□□□□□ -1.82
CLK1-208ENST00000464454 RIT1Q92963 219 aa3.71□□□□□ -1.82
CLK1-208ENST00000464454 AK8Q96MA6 479 aa3.71□□□□□ -1.82
CLK1-208ENST00000464454 GPATCH1Q9BRR8 931 aaKnown RBP3.71□□□□□ -1.82
CLK1-208ENST00000464454 FSD1Q9BTV5 496 aa3.71□□□□□ -1.82
CLK1-208ENST00000464454 OR2B2Q9GZK3 357 aa3.71□□□□□ -1.82
CLK1-208ENST00000464454 FAM49AQ9H0Q0 323 aaPredicted RBP3.71□□□□□ -1.82
CLK1-208ENST00000464454 C2orf40Q9H1Z8 148 aa3.71□□□□□ -1.82
CLK1-208ENST00000464454 ACTL8Q9H568 366 aa3.71□□□□□ -1.82
CLK1-208ENST00000464454 LMAN1LQ9HAT1 526 aa3.71□□□□□ -1.82
CLK1-208ENST00000464454 C2orf42Q9NWW7 574 aa3.71□□□□□ -1.82
CLK1-208ENST00000464454 PKD2L2Q9NZM6 624 aa3.71□□□□□ -1.82
CLK1-208ENST00000464454 LEF1Q9UJU2 399 aaPredicted RBP3.71□□□□□ -1.82
CLK1-208ENST00000464454 KIAA1210Q9ULL0 1709 aa3.7□□□□□ -1.82
CLK1-208ENST00000464454 A0A0U1RQK1 487 aa3.7□□□□□ -1.82
CLK1-208ENST00000464454 ZNF320A2RRD8 509 aa3.7□□□□□ -1.82
CLK1-208ENST00000464454 YDJCA8MPS7 323 aa3.7□□□□□ -1.82
CLK1-208ENST00000464454 FLRT2O43155 660 aa3.7□□□□□ -1.82
CLK1-208ENST00000464454 SELENOFO60613 162 aa3.7□□□□□ -1.82
CLK1-208ENST00000464454 CLPTM1O96005 669 aa3.7□□□□□ -1.82
CLK1-208ENST00000464454 PAK4O96013 591 aaPredicted RBP3.7□□□□□ -1.82
CLK1-208ENST00000464454 APOHP02749 345 aaPredicted RBP3.7□□□□□ -1.82
CLK1-208ENST00000464454 PATE4P0C8F1 98 aa3.7□□□□□ -1.82
CLK1-208ENST00000464454 STAG3L1P0CL83 205 aa3.7□□□□□ -1.82
CLK1-208ENST00000464454 GP1BBP13224 206 aa3.7□□□□□ -1.82
CLK1-208ENST00000464454 CD27P26842 260 aa3.7□□□□□ -1.82
CLK1-208ENST00000464454 CETN2P41208 172 aa3.7□□□□□ -1.82
CLK1-208ENST00000464454 NR0B1P51843 470 aaKnown RBP3.7□□□□□ -1.82
CLK1-208ENST00000464454 ATP12AP54707 1039 aa3.7□□□□□ -1.82
CLK1-208ENST00000464454 CDR2Q01850 454 aa3.7□□□□□ -1.82
CLK1-208ENST00000464454 CACNG1Q06432 222 aa3.7□□□□□ -1.82
CLK1-208ENST00000464454 TRAP1Q12931 704 aaKnown RBP3.7□□□□□ -1.82
CLK1-208ENST00000464454 NFE2L1Q14494 772 aa3.7□□□□□ -1.82
CLK1-208ENST00000464454 RBBP7Q16576 425 aa3.7□□□□□ -1.82
CLK1-208ENST00000464454 TYSND1Q2T9J0 566 aa3.7□□□□□ -1.82
CLK1-208ENST00000464454 XKR3Q5GH77 459 aa3.7□□□□□ -1.82
CLK1-208ENST00000464454 LYSMD4Q5XG99 296 aa3.7□□□□□ -1.82
CLK1-208ENST00000464454 ARHGAP17Q68EM7 881 aa3.7□□□□□ -1.82
CLK1-208ENST00000464454 CASC4Q6P4E1 433 aa3.7□□□□□ -1.82
CLK1-208ENST00000464454 CYB5D1Q6P9G0 228 aa3.7□□□□□ -1.82
CLK1-208ENST00000464454 C15orf39Q6ZRI6 1047 aa3.7□□□□□ -1.82
CLK1-208ENST00000464454 LINC00696Q6ZRV3 163 aa3.7□□□□□ -1.82
CLK1-208ENST00000464454 SH2D5Q6ZV89 423 aa3.7□□□□□ -1.82
CLK1-208ENST00000464454 OTOAQ7RTW8 1153 aa3.7□□□□□ -1.82
CLK1-208ENST00000464454 PIWIL3Q7Z3Z3 882 aaKnown RBP3.7□□□□□ -1.82
CLK1-208ENST00000464454 PIGZQ86VD9 579 aa3.7□□□□□ -1.82
CLK1-208ENST00000464454 TRIM58Q8NG06 486 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms