RNA–Protein interactions for RNA: ENST00000464451.5

SEC61A1-203, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 1,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-203ENST00000464451 SOX11P35716 441 aa11.74□□□□□ -0.53
SEC61A1-203ENST00000464451 SLC6A12P48065 614 aa11.74□□□□□ -0.53
SEC61A1-203ENST00000464451 AP1S2P56377 157 aa11.74□□□□□ -0.53
SEC61A1-203ENST00000464451 DCDC1P59894 354 aa11.74□□□□□ -0.53
SEC61A1-203ENST00000464451 MERTKQ12866 999 aa11.74□□□□□ -0.53
SEC61A1-203ENST00000464451 USP39Q53GS9 565 aaKnown RBP11.74□□□□□ -0.53
SEC61A1-203ENST00000464451 LRRC73Q5JTD7 316 aa11.74□□□□□ -0.53
SEC61A1-203ENST00000464451 BORAQ6PGQ7 559 aa11.74□□□□□ -0.53
SEC61A1-203ENST00000464451 RBM44Q6ZP01 1051 aaKnown RBP11.74□□□□□ -0.53
SEC61A1-203ENST00000464451 NEK10Q6ZWH5 1172 aa11.74□□□□□ -0.53
SEC61A1-203ENST00000464451 DET1Q7L5Y6 550 aa11.74□□□□□ -0.53
SEC61A1-203ENST00000464451 CAMKK1Q8N5S9 505 aa11.74□□□□□ -0.53
SEC61A1-203ENST00000464451 FAM160A2Q8N612 972 aaPredicted RBP11.74□□□□□ -0.53
SEC61A1-203ENST00000464451 MCOLN3Q8TDD5 553 aa11.74□□□□□ -0.53
SEC61A1-203ENST00000464451 NUDT8Q8WV74 236 aa11.74□□□□□ -0.53
SEC61A1-203ENST00000464451 SELENOMQ8WWX9 145 aa11.74□□□□□ -0.53
SEC61A1-203ENST00000464451 MRGPRX1Q96LB2 322 aa11.74□□□□□ -0.53
SEC61A1-203ENST00000464451 RNF145Q96MT1 663 aa11.74□□□□□ -0.53
SEC61A1-203ENST00000464451 ZNF583Q96ND8 569 aa11.74□□□□□ -0.53
SEC61A1-203ENST00000464451 SEPHS2Q99611 448 aa11.74□□□□□ -0.53
SEC61A1-203ENST00000464451 HEPHQ9BQS7 1158 aa11.74□□□□□ -0.53
SEC61A1-203ENST00000464451 CHID1Q9BWS9 393 aa11.74□□□□□ -0.53
SEC61A1-203ENST00000464451 ACPTQ9BZG2 426 aa11.74□□□□□ -0.53
SEC61A1-203ENST00000464451 FAM83DQ9H4H8 585 aa11.74□□□□□ -0.53
SEC61A1-203ENST00000464451 ELOVL6Q9H5J4 265 aa11.74□□□□□ -0.53
SEC61A1-203ENST00000464451 GORASP2Q9H8Y8 452 aa11.74□□□□□ -0.53
SEC61A1-203ENST00000464451 CLK4Q9HAZ1 481 aaKnown RBP11.74□□□□□ -0.53
SEC61A1-203ENST00000464451 RAD18Q9NS91 495 aa11.74□□□□□ -0.53
SEC61A1-203ENST00000464451 VAPAQ9P0L0 249 aa11.74□□□□□ -0.53
SEC61A1-203ENST00000464451 CD84Q9UIB8 345 aa11.74□□□□□ -0.53
SEC61A1-203ENST00000464451 USP22Q9UPT9 525 aa11.74□□□□□ -0.53
SEC61A1-203ENST00000464451 NEUROG3Q9Y4Z2 214 aa11.74□□□□□ -0.53
SEC61A1-203ENST00000464451 MYO15AQ9UKN7 3530 aa11.74□□□□□ -0.53
SEC61A1-203ENST00000464451 NPC1O15118 1278 aa11.74□□□□□ -0.53
SEC61A1-203ENST00000464451 AXIN1O15169 862 aa11.74□□□□□ -0.53
SEC61A1-203ENST00000464451 VILLO15195 856 aa11.74□□□□□ -0.53
SEC61A1-203ENST00000464451 DFNA5O60443 496 aa11.74□□□□□ -0.53
SEC61A1-203ENST00000464451 PDYNP01213 254 aa11.74□□□□□ -0.53
SEC61A1-203ENST00000464451 BCKDHAP12694 445 aa11.74□□□□□ -0.53
SEC61A1-203ENST00000464451 PRPH2P23942 346 aa11.74□□□□□ -0.53
SEC61A1-203ENST00000464451 TUBA4AP68366 448 aa11.74□□□□□ -0.53
SEC61A1-203ENST00000464451 BOP1Q14137 746 aaKnown RBP11.74□□□□□ -0.53
SEC61A1-203ENST00000464451 HNRNPA1L2Q32P51 320 aaKnown RBP11.74□□□□□ -0.53
SEC61A1-203ENST00000464451 SLC36A3Q495N2 470 aa11.74□□□□□ -0.53
SEC61A1-203ENST00000464451 FAM98BQ52LJ0 330 aaKnown RBP11.74□□□□□ -0.53
SEC61A1-203ENST00000464451 SPANXN4Q5MJ08 99 aa11.74□□□□□ -0.53
SEC61A1-203ENST00000464451 C9orf64Q5T6V5 341 aa11.74□□□□□ -0.53
SEC61A1-203ENST00000464451 SUSD1Q6UWL2 747 aa11.74□□□□□ -0.53
SEC61A1-203ENST00000464451 RIMKLAQ8IXN7 391 aa11.74□□□□□ -0.53
SEC61A1-203ENST00000464451 KRTCAP2Q8N6L1 136 aa11.74□□□□□ -0.53
SEC61A1-203ENST00000464451 L3MBTL4Q8NA19 623 aa11.74□□□□□ -0.53
SEC61A1-203ENST00000464451 FAM47BQ8NA70 645 aa11.74□□□□□ -0.53
SEC61A1-203ENST00000464451 OR2T12Q8NG77 320 aa11.74□□□□□ -0.53
SEC61A1-203ENST00000464451 FRS2Q8WU20 508 aa11.74□□□□□ -0.53
SEC61A1-203ENST00000464451 ASZ1Q8WWH4 475 aa11.74□□□□□ -0.53
SEC61A1-203ENST00000464451 MTFMTQ96DP5 389 aaKnown RBP11.74□□□□□ -0.53
SEC61A1-203ENST00000464451 OR52E6Q96RD3 313 aa11.74□□□□□ -0.53
SEC61A1-203ENST00000464451 PRRX2Q99811 253 aa11.74□□□□□ -0.53
SEC61A1-203ENST00000464451 THUMPD3Q9BV44 507 aaKnown RBP11.74□□□□□ -0.53
SEC61A1-203ENST00000464451 CAAP1Q9H8G2 361 aa11.74□□□□□ -0.53
SEC61A1-203ENST00000464451 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.74□□□□□ -0.53
SEC61A1-203ENST00000464451 ZNF639Q9UID6 485 aa11.74□□□□□ -0.53
SEC61A1-203ENST00000464451 MBD1Q9UIS9 605 aaPredicted RBP11.74□□□□□ -0.53
SEC61A1-203ENST00000464451 DMTF1Q9Y222 760 aa11.74□□□□□ -0.53
SEC61A1-203ENST00000464451 KCNE1BA0A087WTH5 132 aa11.73□□□□□ -0.53
SEC61A1-203ENST00000464451 TSPAN11A1L157 253 aa11.73□□□□□ -0.53
SEC61A1-203ENST00000464451 PLOD2O00469 737 aa11.73□□□□□ -0.53
SEC61A1-203ENST00000464451 EI24O14681 340 aa11.73□□□□□ -0.53
SEC61A1-203ENST00000464451 HRO43593 1189 aa11.73□□□□□ -0.53
SEC61A1-203ENST00000464451 RAP2AP10114 183 aa11.73□□□□□ -0.53
SEC61A1-203ENST00000464451 PRPS2P11908 318 aa11.73□□□□□ -0.53
SEC61A1-203ENST00000464451 ZNF23P17027 643 aa11.73□□□□□ -0.53
SEC61A1-203ENST00000464451 MAPK1P28482 360 aa11.73□□□□□ -0.53
SEC61A1-203ENST00000464451 CLDN8P56748 225 aa11.73□□□□□ -0.53
SEC61A1-203ENST00000464451 PLIN5Q00G26 463 aa11.73□□□□□ -0.53
SEC61A1-203ENST00000464451 CYP4F3Q08477 520 aa11.73□□□□□ -0.53
SEC61A1-203ENST00000464451 CAMK2GQ13555 558 aaPredicted RBP11.73□□□□□ -0.53
SEC61A1-203ENST00000464451 LPAL2Q16609 132 aa11.73□□□□□ -0.53
SEC61A1-203ENST00000464451 ZXDCQ2QGD7 858 aaPredicted RBP11.73□□□□□ -0.53
SEC61A1-203ENST00000464451 PTCHD3Q3KNS1 767 aa11.73□□□□□ -0.53
SEC61A1-203ENST00000464451 POM121L1PQ3SYA9 428 aa11.73□□□□□ -0.53
SEC61A1-203ENST00000464451 HSD11B1LQ7Z5J1 315 aa11.73□□□□□ -0.53
SEC61A1-203ENST00000464451 VRK3Q8IV63 474 aa11.73□□□□□ -0.53
SEC61A1-203ENST00000464451 TRIML2Q8N7C3 387 aa11.73□□□□□ -0.53
SEC61A1-203ENST00000464451 PHOX2BQ99453 314 aa11.73□□□□□ -0.53
SEC61A1-203ENST00000464451 UGT2B28Q9BY64 529 aa11.73□□□□□ -0.53
SEC61A1-203ENST00000464451 RBM38Q9H0Z9 239 aaKnown RBP11.73□□□□□ -0.53
SEC61A1-203ENST00000464451 ZSCAN32Q9NX65 697 aa11.73□□□□□ -0.53
SEC61A1-203ENST00000464451 SMPD3Q9NY59 655 aaPredicted RBP11.73□□□□□ -0.53
SEC61A1-203ENST00000464451 EBF1Q9UH73 591 aa11.73□□□□□ -0.53
SEC61A1-203ENST00000464451 TMED5Q9Y3A6 229 aa11.73□□□□□ -0.53
SEC61A1-203ENST00000464451 EDDM13A0A1B0GTR0 161 aa11.72□□□□□ -0.53
SEC61A1-203ENST00000464451 UPK3BL1B0FP48 263 aa11.72□□□□□ -0.53
SEC61A1-203ENST00000464451 UPK3BL2E5RIL1 263 aa11.72□□□□□ -0.53
SEC61A1-203ENST00000464451 NPIPB8E9PQR5 432 aa11.72□□□□□ -0.53
SEC61A1-203ENST00000464451 QSOX1O00391 747 aa11.72□□□□□ -0.53
SEC61A1-203ENST00000464451 GSTA4O15217 222 aa11.72□□□□□ -0.53
SEC61A1-203ENST00000464451 CLOCKO15516 846 aa11.72□□□□□ -0.53
SEC61A1-203ENST00000464451 DEAF1O75398 565 aaPredicted RBP11.72□□□□□ -0.53
SEC61A1-203ENST00000464451 ERN1O75460 977 aaKnown RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms