RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 H2AFJQ9BTM1 129 aa16.35■□□□□ 0.21
VPS52-215ENST00000464425 DPH7Q9BTV6 452 aa16.35■□□□□ 0.21
VPS52-215ENST00000464425 TMEM109Q9BVC6 243 aa16.35■□□□□ 0.21
VPS52-215ENST00000464425 ATG10Q9H0Y0 220 aa16.35■□□□□ 0.21
VPS52-215ENST00000464425 SLC6A20Q9NP91 592 aa16.35■□□□□ 0.21
VPS52-215ENST00000464425 MRPS30Q9NP92 439 aaKnown RBP16.35■□□□□ 0.21
VPS52-215ENST00000464425 STOX2Q9P2F5 926 aaPredicted RBP16.35■□□□□ 0.21
VPS52-215ENST00000464425 IQANK1A0A1B0GTG1 560 aa16.34■□□□□ 0.21
VPS52-215ENST00000464425 TARM1B6A8C7 271 aa16.34■□□□□ 0.21
VPS52-215ENST00000464425 H3BMH7 237 aa16.34■□□□□ 0.21
VPS52-215ENST00000464425 MEN1O00255 615 aa16.34■□□□□ 0.21
VPS52-215ENST00000464425 CDC7O00311 574 aa16.34■□□□□ 0.21
VPS52-215ENST00000464425 NKX2-8O15522 239 aa16.34■□□□□ 0.21
VPS52-215ENST00000464425 PHGDHO43175 533 aaKnown RBP16.34■□□□□ 0.21
VPS52-215ENST00000464425 CTSVO60911 334 aa16.34■□□□□ 0.21
VPS52-215ENST00000464425 CDH16O75309 829 aa16.34■□□□□ 0.21
VPS52-215ENST00000464425 GUCA1CO95843 209 aa16.34■□□□□ 0.21
VPS52-215ENST00000464425 ALDOAP04075 364 aaKnown RBP16.34■□□□□ 0.21
VPS52-215ENST00000464425 KLK3P07288 261 aaPredicted RBP16.34■□□□□ 0.21
VPS52-215ENST00000464425 MAGEA12P43365 314 aa16.34■□□□□ 0.21
VPS52-215ENST00000464425 BMPR2Q13873 1038 aa16.34■□□□□ 0.21
VPS52-215ENST00000464425 ZC3H12BQ5HYM0 836 aaKnown RBP16.34■□□□□ 0.21
VPS52-215ENST00000464425 ICE2Q659A1 982 aa16.34■□□□□ 0.21
VPS52-215ENST00000464425 LCN10Q6JVE6 187 aa16.34■□□□□ 0.21
VPS52-215ENST00000464425 SPATA6LQ8N4H0 392 aa16.34■□□□□ 0.21
VPS52-215ENST00000464425 ANKRD49Q8WVL7 239 aa16.34■□□□□ 0.21
VPS52-215ENST00000464425 SLC45A3Q96JT2 553 aa16.34■□□□□ 0.21
VPS52-215ENST00000464425 RUFY1Q96T51 708 aa16.34■□□□□ 0.21
VPS52-215ENST00000464425 EFHD1Q9BUP0 239 aa16.34■□□□□ 0.21
VPS52-215ENST00000464425 UNKQ9C0B0 810 aaKnown RBP16.34■□□□□ 0.21
VPS52-215ENST00000464425 CHST8Q9H2A9 424 aa16.34■□□□□ 0.21
VPS52-215ENST00000464425 SNX15Q9NRS6 342 aa16.34■□□□□ 0.21
VPS52-215ENST00000464425 STARD5Q9NSY2 213 aa16.34■□□□□ 0.21
VPS52-215ENST00000464425 PCMTD2Q9NV79 361 aa16.34■□□□□ 0.21
VPS52-215ENST00000464425 ARL15Q9NXU5 204 aa16.34■□□□□ 0.21
VPS52-215ENST00000464425 UTP6Q9NYH9 597 aaKnown RBP16.34■□□□□ 0.21
VPS52-215ENST00000464425 PLAAQ9Y263 795 aa16.34■□□□□ 0.21
VPS52-215ENST00000464425 ACOT9Q9Y305 439 aa16.34■□□□□ 0.21
VPS52-215ENST00000464425 ANKRD12Q6UB98 2062 aa16.34■□□□□ 0.21
VPS52-215ENST00000464425 FAM208BQ5VWN6 2430 aa16.34■□□□□ 0.21
VPS52-215ENST00000464425 PCM1Q15154 2024 aa16.33■□□□□ 0.21
VPS52-215ENST00000464425 SEC16AO15027 2179 aa16.33■□□□□ 0.2
VPS52-215ENST00000464425 A0A087X1B8 175 aa16.33■□□□□ 0.2
VPS52-215ENST00000464425 A0A0J9YVX5 310 aa16.33■□□□□ 0.2
VPS52-215ENST00000464425 PABPN1LA6NDY0 278 aaKnown RBP16.33■□□□□ 0.2
VPS52-215ENST00000464425 NPEPPSL1A6NEC2 478 aa16.33■□□□□ 0.2
VPS52-215ENST00000464425 TRIM49D1C9J1S8 452 aa16.33■□□□□ 0.2
VPS52-215ENST00000464425 TERTO14746 1132 aaKnown RBP16.33■□□□□ 0.2
VPS52-215ENST00000464425 ZSCAN9O15535 394 aaPredicted RBP16.33■□□□□ 0.2
VPS52-215ENST00000464425 SLC35E2BP0CK96 405 aa16.33■□□□□ 0.2
VPS52-215ENST00000464425 PRKAR1AP10644 381 aa16.33■□□□□ 0.2
VPS52-215ENST00000464425 TYK2P29597 1187 aa16.33■□□□□ 0.2
VPS52-215ENST00000464425 RORAP35398 523 aa16.33■□□□□ 0.2
VPS52-215ENST00000464425 PRDX1Q06830 199 aaKnown RBP16.33■□□□□ 0.2
VPS52-215ENST00000464425 IFFO1Q0D2I5 559 aa16.33■□□□□ 0.2
VPS52-215ENST00000464425 NAE1Q13564 534 aa16.33■□□□□ 0.2
VPS52-215ENST00000464425 DNASE1L3Q13609 305 aa16.33■□□□□ 0.2
VPS52-215ENST00000464425 PTCHD3Q3KNS1 767 aa16.33■□□□□ 0.2
VPS52-215ENST00000464425 C1orf189Q5VU69 101 aa16.33■□□□□ 0.2
VPS52-215ENST00000464425 C16orf46Q6P387 395 aa16.33■□□□□ 0.2
VPS52-215ENST00000464425 FBXO42Q6P3S6 717 aa16.33■□□□□ 0.2
VPS52-215ENST00000464425 TLDC1Q6P9B6 456 aa16.33■□□□□ 0.2
VPS52-215ENST00000464425 AGTRAPQ6RW13 159 aa16.33■□□□□ 0.2
VPS52-215ENST00000464425 RAPH1Q70E73 1250 aa16.33■□□□□ 0.2
VPS52-215ENST00000464425 CMC1Q7Z7K0 106 aa16.33■□□□□ 0.2
VPS52-215ENST00000464425 DSELQ8IZU8 1212 aa16.33■□□□□ 0.2
VPS52-215ENST00000464425 RIBC1Q8N443 379 aaPredicted RBP16.33■□□□□ 0.2
VPS52-215ENST00000464425 STARD8Q92502 1023 aa16.33■□□□□ 0.2
VPS52-215ENST00000464425 MED8Q96G25 268 aa16.33■□□□□ 0.2
VPS52-215ENST00000464425 LRFN5Q96NI6 719 aa16.33■□□□□ 0.2
VPS52-215ENST00000464425 SELENOSQ9BQE4 189 aa16.33■□□□□ 0.2
VPS52-215ENST00000464425 TRIM54Q9BYV2 358 aa16.33■□□□□ 0.2
VPS52-215ENST00000464425 DERL2Q9GZP9 239 aa16.33■□□□□ 0.2
VPS52-215ENST00000464425 CCDC177Q9NQR7 707 aaPredicted RBP16.33■□□□□ 0.2
VPS52-215ENST00000464425 ARGLU1Q9NWB6 273 aaPredicted RBP16.33■□□□□ 0.2
VPS52-215ENST00000464425 TLK1Q9UKI8 766 aa16.33■□□□□ 0.2
VPS52-215ENST00000464425 KLK4Q9Y5K2 254 aa16.33■□□□□ 0.2
VPS52-215ENST00000464425 AP1M2Q9Y6Q5 423 aa16.33■□□□□ 0.2
VPS52-215ENST00000464425 IGKV1-8A0A0C4DH67 115 aa16.32■□□□□ 0.2
VPS52-215ENST00000464425 ZNF891A8MT65 544 aaPredicted RBP16.32■□□□□ 0.2
VPS52-215ENST00000464425 CCNDBP1O95273 360 aa16.32■□□□□ 0.2
VPS52-215ENST00000464425 C2P06681 752 aa16.32■□□□□ 0.2
VPS52-215ENST00000464425 HBQ1P09105 142 aa16.32■□□□□ 0.2
VPS52-215ENST00000464425 CCDC166P0CW27 439 aa16.32■□□□□ 0.2
VPS52-215ENST00000464425 H2AFXP16104 143 aaPredicted RBP16.32■□□□□ 0.2
VPS52-215ENST00000464425 VSX2P58304 361 aaPredicted RBP16.32■□□□□ 0.2
VPS52-215ENST00000464425 TBPL1P62380 186 aa16.32■□□□□ 0.2
VPS52-215ENST00000464425 FRMPD2BQ6IN97 320 aa16.32■□□□□ 0.2
VPS52-215ENST00000464425 SBSNQ6UWP8 590 aa16.32■□□□□ 0.2
VPS52-215ENST00000464425 ADCK2Q7Z695 626 aa16.32■□□□□ 0.2
VPS52-215ENST00000464425 OR2W6PQ8NHA6 318 aa16.32■□□□□ 0.2
VPS52-215ENST00000464425 EPS8L3Q8TE67 593 aaKnown RBP16.32■□□□□ 0.2
VPS52-215ENST00000464425 PLCD4Q9BRC7 762 aa16.32■□□□□ 0.2
VPS52-215ENST00000464425 CUEDC1Q9NWM3 386 aaPredicted RBP16.32■□□□□ 0.2
VPS52-215ENST00000464425 DHCR7Q9UBM7 475 aaKnown RBP16.32■□□□□ 0.2
VPS52-215ENST00000464425 KCND3Q9UK17 655 aa16.32■□□□□ 0.2
VPS52-215ENST00000464425 A0A096LPK6 155 aa16.31■□□□□ 0.2
VPS52-215ENST00000464425 LOC105369274A0A096LPK9 316 aa16.31■□□□□ 0.2
VPS52-215ENST00000464425 LOC102723532A0A0G2JNH3 316 aa16.31■□□□□ 0.2
VPS52-215ENST00000464425 CCDC189A1A4V9 331 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms