RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 CORO1CQ9ULV4 474 aaPredicted RBP12.41□□□□□ -0.42
XRN1-203ENST00000463916 SH2B3Q9UQQ2 575 aa12.41□□□□□ -0.42
XRN1-203ENST00000463916 MAN2B2Q9Y2E5 1009 aa12.41□□□□□ -0.42
XRN1-203ENST00000463916 MED13Q9UHV7 2174 aa12.41□□□□□ -0.42
XRN1-203ENST00000463916 TCRBV9S1A1TA0A576 114 aa12.4□□□□□ -0.42
XRN1-203ENST00000463916 C9J4A7 227 aa12.4□□□□□ -0.42
XRN1-203ENST00000463916 H0YGG7 62 aa12.4□□□□□ -0.42
XRN1-203ENST00000463916 NDC80O14777 642 aa12.4□□□□□ -0.42
XRN1-203ENST00000463916 EIF2S1P05198 315 aaKnown RBP12.4□□□□□ -0.42
XRN1-203ENST00000463916 C8GP07360 202 aa12.4□□□□□ -0.42
XRN1-203ENST00000463916 SFTPCP11686 197 aa12.4□□□□□ -0.42
XRN1-203ENST00000463916 NR1D1P20393 614 aa12.4□□□□□ -0.42
XRN1-203ENST00000463916 TAS2R39P59534 338 aa12.4□□□□□ -0.42
XRN1-203ENST00000463916 ARF3P61204 181 aaPredicted RBP12.4□□□□□ -0.42
XRN1-203ENST00000463916 GRM7Q14831 915 aa12.4□□□□□ -0.42
XRN1-203ENST00000463916 TCTE1Q5JU00 501 aa12.4□□□□□ -0.42
XRN1-203ENST00000463916 LRRC8EQ6NSJ5 796 aa12.4□□□□□ -0.42
XRN1-203ENST00000463916 MRPL14Q6P1L8 145 aaKnown RBP12.4□□□□□ -0.42
XRN1-203ENST00000463916 SLC26A11Q86WA9 606 aa12.4□□□□□ -0.42
XRN1-203ENST00000463916 PTRH1Q86Y79 214 aaKnown RBP12.4□□□□□ -0.42
XRN1-203ENST00000463916 PLD3Q8IV08 490 aa12.4□□□□□ -0.42
XRN1-203ENST00000463916 CEP97Q8IW35 865 aa12.4□□□□□ -0.42
XRN1-203ENST00000463916 PALM2Q8IXS6 379 aa12.4□□□□□ -0.42
XRN1-203ENST00000463916 THAP4Q8WY91 577 aa12.4□□□□□ -0.42
XRN1-203ENST00000463916 CCDC138Q96M89 665 aa12.4□□□□□ -0.42
XRN1-203ENST00000463916 ZFYVE21Q9BQ24 234 aa12.4□□□□□ -0.42
XRN1-203ENST00000463916 FAM117AQ9C073 453 aa12.4□□□□□ -0.42
XRN1-203ENST00000463916 ATG10Q9H0Y0 220 aa12.4□□□□□ -0.42
XRN1-203ENST00000463916 NDOR1Q9UHB4 597 aa12.4□□□□□ -0.42
XRN1-203ENST00000463916 TUBD1Q9UJT1 453 aa12.4□□□□□ -0.42
XRN1-203ENST00000463916 TLK1Q9UKI8 766 aa12.4□□□□□ -0.42
XRN1-203ENST00000463916 FAM95CA0A1B0GW59 222 aa12.39□□□□□ -0.43
XRN1-203ENST00000463916 A0A1B0GX78 115 aa12.39□□□□□ -0.43
XRN1-203ENST00000463916 HYKKA2RU49 373 aa12.39□□□□□ -0.43
XRN1-203ENST00000463916 ZNF839A8K0R7 811 aa12.39□□□□□ -0.43
XRN1-203ENST00000463916 H7BY64 318 aa12.39□□□□□ -0.43
XRN1-203ENST00000463916 EIF3HO15372 352 aaKnown RBP eCLIP12.39□□□□□ -0.43
XRN1-203ENST00000463916 PLA2G2AP14555 144 aa12.39□□□□□ -0.43
XRN1-203ENST00000463916 OR1D4P47884 311 aa12.39□□□□□ -0.43
XRN1-203ENST00000463916 PMS2P54278 862 aa12.39□□□□□ -0.43
XRN1-203ENST00000463916 TBPL1P62380 186 aa12.39□□□□□ -0.43
XRN1-203ENST00000463916 SNRPNP63162 240 aaKnown RBP12.39□□□□□ -0.43
XRN1-203ENST00000463916 THEMIS2Q5TEJ8 643 aa12.39□□□□□ -0.43
XRN1-203ENST00000463916 AGTRAPQ6RW13 159 aa12.39□□□□□ -0.43
XRN1-203ENST00000463916 C3orf62Q6ZUJ4 267 aa12.39□□□□□ -0.43
XRN1-203ENST00000463916 COX15Q7KZN9 410 aa12.39□□□□□ -0.43
XRN1-203ENST00000463916 APLFQ8IW19 511 aaPredicted RBP12.39□□□□□ -0.43
XRN1-203ENST00000463916 ANKRD49Q8WVL7 239 aa12.39□□□□□ -0.43
XRN1-203ENST00000463916 SEC14L1Q92503 715 aa12.39□□□□□ -0.43
XRN1-203ENST00000463916 ZNF592Q92610 1267 aa12.39□□□□□ -0.43
XRN1-203ENST00000463916 PRAP1Q96NZ9 151 aa12.39□□□□□ -0.43
XRN1-203ENST00000463916 OR2A5Q96R48 311 aa12.39□□□□□ -0.43
XRN1-203ENST00000463916 RAB17Q9H0T7 212 aa12.39□□□□□ -0.43
XRN1-203ENST00000463916 RELNP78509 3460 aa12.39□□□□□ -0.43
XRN1-203ENST00000463916 MDC1Q14676 2089 aaKnown RBP12.39□□□□□ -0.43
XRN1-203ENST00000463916 ARGFXA6NJG6 315 aa12.39□□□□□ -0.43
XRN1-203ENST00000463916 DSCR3O14972 297 aa12.39□□□□□ -0.43
XRN1-203ENST00000463916 SLC16A5O15375 505 aa12.39□□□□□ -0.43
XRN1-203ENST00000463916 ZNF37AP17032 561 aaPredicted RBP12.39□□□□□ -0.43
XRN1-203ENST00000463916 ARSFP54793 590 aa12.39□□□□□ -0.43
XRN1-203ENST00000463916 SP140Q13342 867 aa12.39□□□□□ -0.43
XRN1-203ENST00000463916 NAE1Q13564 534 aa12.39□□□□□ -0.43
XRN1-203ENST00000463916 HKDC1Q2TB90 917 aa12.39□□□□□ -0.43
XRN1-203ENST00000463916 SBSNQ6UWP8 590 aa12.39□□□□□ -0.43
XRN1-203ENST00000463916 CCDC25Q86WR0 208 aa12.39□□□□□ -0.43
XRN1-203ENST00000463916 PDLIM5Q96HC4 596 aaKnown RBP12.39□□□□□ -0.43
XRN1-203ENST00000463916 VPS39Q96JC1 886 aa12.39□□□□□ -0.43
XRN1-203ENST00000463916 C10orf90Q96M02 699 aa12.39□□□□□ -0.43
XRN1-203ENST00000463916 DHRS4Q9BTZ2 278 aa12.39□□□□□ -0.43
XRN1-203ENST00000463916 RHOJQ9H4E5 214 aa12.39□□□□□ -0.43
XRN1-203ENST00000463916 CCDC177Q9NQR7 707 aaPredicted RBP12.39□□□□□ -0.43
XRN1-203ENST00000463916 MTO1Q9Y2Z2 717 aaKnown RBP12.39□□□□□ -0.43
XRN1-203ENST00000463916 PTRH2Q9Y3E5 179 aaKnown RBP12.39□□□□□ -0.43
XRN1-203ENST00000463916 MAU2Q9Y6X3 613 aa12.39□□□□□ -0.43
XRN1-203ENST00000463916 PRRC2CQ9Y520 2896 aaKnown RBP12.38□□□□□ -0.43
XRN1-203ENST00000463916 CDC7O00311 574 aa12.38□□□□□ -0.43
XRN1-203ENST00000463916 HAT1O14929 419 aa12.38□□□□□ -0.43
XRN1-203ENST00000463916 ONECUT2O95948 504 aa12.38□□□□□ -0.43
XRN1-203ENST00000463916 PDGFAP04085 211 aa12.38□□□□□ -0.43
XRN1-203ENST00000463916 UMODP07911 640 aa12.38□□□□□ -0.43
XRN1-203ENST00000463916 ABATP80404 500 aa12.38□□□□□ -0.43
XRN1-203ENST00000463916 PRTGQ2VWP7 1150 aa12.38□□□□□ -0.43
XRN1-203ENST00000463916 COLEC12Q5KU26 742 aa12.38□□□□□ -0.43
XRN1-203ENST00000463916 OR2Y1Q8NGV0 311 aa12.38□□□□□ -0.43
XRN1-203ENST00000463916 C9orf43Q8TAL5 461 aaPredicted RBP12.38□□□□□ -0.43
XRN1-203ENST00000463916 ALKBH8Q96BT7 664 aaKnown RBP12.38□□□□□ -0.43
XRN1-203ENST00000463916 PYCR2Q96C36 320 aa12.38□□□□□ -0.43
XRN1-203ENST00000463916 ING2Q9H160 280 aa12.38□□□□□ -0.43
XRN1-203ENST00000463916 CAB39LQ9H9S4 337 aa12.38□□□□□ -0.43
XRN1-203ENST00000463916 LRRC4CQ9HCJ2 640 aa12.38□□□□□ -0.43
XRN1-203ENST00000463916 ARL15Q9NXU5 204 aa12.38□□□□□ -0.43
XRN1-203ENST00000463916 UTP6Q9NYH9 597 aaKnown RBP12.38□□□□□ -0.43
XRN1-203ENST00000463916 ANKMY1Q9P2S6 941 aa12.38□□□□□ -0.43
XRN1-203ENST00000463916 GPN3Q9UHW5 284 aaPredicted RBP12.38□□□□□ -0.43
XRN1-203ENST00000463916 TP53TG5Q9Y2B4 290 aa12.38□□□□□ -0.43
XRN1-203ENST00000463916 FAM159BA6NKW6 160 aa12.38□□□□□ -0.43
XRN1-203ENST00000463916 PYCARD-AS1I3L0S3 204 aa12.38□□□□□ -0.43
XRN1-203ENST00000463916 MASP2O00187 686 aa12.38□□□□□ -0.43
XRN1-203ENST00000463916 STATHP02808 62 aa12.38□□□□□ -0.43
XRN1-203ENST00000463916 NPPBP16860 134 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms