RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 LRRC31Q6UY01 552 aa3.58□□□□□ -1.84
SCFD1-204ENST00000463622 ZNF534Q76KX8 674 aa3.58□□□□□ -1.84
SCFD1-204ENST00000463622 VSIG1Q86XK7 387 aa3.58□□□□□ -1.84
SCFD1-204ENST00000463622 MAP7D3Q8IWC1 876 aa3.58□□□□□ -1.84
SCFD1-204ENST00000463622 MMGT1Q8N4V1 131 aa3.58□□□□□ -1.84
SCFD1-204ENST00000463622 SPATA22Q8NHS9 363 aa3.58□□□□□ -1.84
SCFD1-204ENST00000463622 FIBINQ8TAL6 211 aa3.58□□□□□ -1.84
SCFD1-204ENST00000463622 ARRDC2Q8TBH0 407 aa3.58□□□□□ -1.84
SCFD1-204ENST00000463622 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.58□□□□□ -1.84
SCFD1-204ENST00000463622 WFIKKN2Q8TEU8 576 aa3.58□□□□□ -1.84
SCFD1-204ENST00000463622 MAML1Q92585 1016 aa3.58□□□□□ -1.84
SCFD1-204ENST00000463622 P3H4Q92791 437 aa3.58□□□□□ -1.84
SCFD1-204ENST00000463622 TTC17Q96AE7 1141 aa3.58□□□□□ -1.84
SCFD1-204ENST00000463622 ZBTB9Q96C00 473 aa3.58□□□□□ -1.84
SCFD1-204ENST00000463622 HDAC11Q96DB2 347 aa3.58□□□□□ -1.84
SCFD1-204ENST00000463622 SGF29Q96ES7 293 aa3.58□□□□□ -1.84
SCFD1-204ENST00000463622 OXNAD1Q96HP4 312 aaPredicted RBP3.58□□□□□ -1.84
SCFD1-204ENST00000463622 SERAC1Q96JX3 654 aa3.58□□□□□ -1.84
SCFD1-204ENST00000463622 IL12RB2Q99665 862 aa3.58□□□□□ -1.84
SCFD1-204ENST00000463622 NCAPGQ9BPX3 1015 aa3.58□□□□□ -1.84
SCFD1-204ENST00000463622 MACROD1Q9BQ69 325 aa3.58□□□□□ -1.84
SCFD1-204ENST00000463622 RHOXF2Q9BQY4 288 aa3.58□□□□□ -1.84
SCFD1-204ENST00000463622 TRIM31Q9BZY9 425 aa3.58□□□□□ -1.84
SCFD1-204ENST00000463622 CIPCQ9C0C6 399 aa3.58□□□□□ -1.84
SCFD1-204ENST00000463622 DPH5Q9H2P9 285 aa3.58□□□□□ -1.84
SCFD1-204ENST00000463622 CATSPERBQ9H7T0 1116 aa3.58□□□□□ -1.84
SCFD1-204ENST00000463622 GEMIN8Q9NWZ8 242 aaKnown RBP3.58□□□□□ -1.84
SCFD1-204ENST00000463622 FBXL12Q9NXK8 326 aa3.58□□□□□ -1.84
SCFD1-204ENST00000463622 GRHL1Q9NZI5 618 aa3.58□□□□□ -1.84
SCFD1-204ENST00000463622 SEPT10Q9P0V9 454 aa3.58□□□□□ -1.84
SCFD1-204ENST00000463622 SLC12A6Q9UHW9 1150 aa3.58□□□□□ -1.84
SCFD1-204ENST00000463622 IPO11Q9UI26 975 aaKnown RBP3.58□□□□□ -1.84
SCFD1-204ENST00000463622 LCMT1Q9UIC8 334 aa3.58□□□□□ -1.84
SCFD1-204ENST00000463622 GGA2Q9UJY4 613 aa3.58□□□□□ -1.84
SCFD1-204ENST00000463622 FZD4Q9ULV1 537 aa3.58□□□□□ -1.84
SCFD1-204ENST00000463622 NCKAP1Q9Y2A7 1128 aa3.58□□□□□ -1.84
SCFD1-204ENST00000463622 SBDSQ9Y3A5 250 aaKnown RBP eCLIP3.58□□□□□ -1.84
SCFD1-204ENST00000463622 CHD5Q8TDI0 1954 aa3.57□□□□□ -1.84
SCFD1-204ENST00000463622 ILVBLA1L0T0 632 aa3.57□□□□□ -1.84
SCFD1-204ENST00000463622 CTAGE15A4D2H0 777 aa3.57□□□□□ -1.84
SCFD1-204ENST00000463622 LRRC72A6NJI9 287 aa3.57□□□□□ -1.84
SCFD1-204ENST00000463622 TTC34A8MYJ7 566 aa3.57□□□□□ -1.84
SCFD1-204ENST00000463622 H0YIZ8 118 aa3.57□□□□□ -1.84
SCFD1-204ENST00000463622 MCF2LO15068 1137 aa3.57□□□□□ -1.84
SCFD1-204ENST00000463622 KDELR3O43731 214 aa3.57□□□□□ -1.84
SCFD1-204ENST00000463622 MAGEC1O60732 1142 aa3.57□□□□□ -1.84
SCFD1-204ENST00000463622 KRT38O76015 456 aa3.57□□□□□ -1.84
SCFD1-204ENST00000463622 TMCC1O94876 653 aa3.57□□□□□ -1.84
SCFD1-204ENST00000463622 MT-CYBP00156 380 aaPredicted RBP3.57□□□□□ -1.84
SCFD1-204ENST00000463622 IFNB1P01574 187 aa3.57□□□□□ -1.84
SCFD1-204ENST00000463622 JCHAINP01591 159 aa3.57□□□□□ -1.84
SCFD1-204ENST00000463622 KRT14P02533 472 aa3.57□□□□□ -1.84
SCFD1-204ENST00000463622 CTSLP07711 333 aa3.57□□□□□ -1.84
SCFD1-204ENST00000463622 F7P08709 466 aaPredicted RBP3.57□□□□□ -1.84
SCFD1-204ENST00000463622 CTAGE8P0CG41 777 aa3.57□□□□□ -1.84
SCFD1-204ENST00000463622 SRCP12931 536 aa3.57□□□□□ -1.84
SCFD1-204ENST00000463622 DGKAP23743 735 aa3.57□□□□□ -1.84
SCFD1-204ENST00000463622 NUDT1P36639 197 aa3.57□□□□□ -1.84
SCFD1-204ENST00000463622 ALDH9A1P49189 494 aa3.57□□□□□ -1.84
SCFD1-204ENST00000463622 NDST2P52849 883 aa3.57□□□□□ -1.84
SCFD1-204ENST00000463622 KRTAP10-11P60412 298 aa3.57□□□□□ -1.84
SCFD1-204ENST00000463622 HNRNPA1L2Q32P51 320 aaKnown RBP3.57□□□□□ -1.84
SCFD1-204ENST00000463622 RABGAP1LQ5R372 815 aa3.57□□□□□ -1.84
SCFD1-204ENST00000463622 MPP7Q5T2T1 576 aa3.57□□□□□ -1.84
SCFD1-204ENST00000463622 C9orf64Q5T6V5 341 aa3.57□□□□□ -1.84
SCFD1-204ENST00000463622 NAPEPLDQ6IQ20 393 aa3.57□□□□□ -1.84
SCFD1-204ENST00000463622 DARS2Q6PI48 645 aaKnown RBP3.57□□□□□ -1.84
SCFD1-204ENST00000463622 NAPRTQ6XQN6 538 aa3.57□□□□□ -1.84
SCFD1-204ENST00000463622 PRPF39Q86UA1 669 aaKnown RBP3.57□□□□□ -1.84
SCFD1-204ENST00000463622 CTAGE6Q86UF2 777 aa3.57□□□□□ -1.84
SCFD1-204ENST00000463622 CACUL1Q86Y37 369 aa3.57□□□□□ -1.84
SCFD1-204ENST00000463622 CTAGE4Q8IX94 777 aa3.57□□□□□ -1.84
SCFD1-204ENST00000463622 CCDC13Q8IYE1 715 aa3.57□□□□□ -1.84
SCFD1-204ENST00000463622 ATPAF2Q8N5M1 289 aa3.57□□□□□ -1.84
SCFD1-204ENST00000463622 DCAF4L2Q8NA75 395 aa3.57□□□□□ -1.84
SCFD1-204ENST00000463622 KDM1BQ8NB78 822 aa3.57□□□□□ -1.84
SCFD1-204ENST00000463622 CCNYQ8ND76 341 aa3.57□□□□□ -1.84
SCFD1-204ENST00000463622 SEMA6DQ8NFY4 1073 aa3.57□□□□□ -1.84
SCFD1-204ENST00000463622 BRIX1Q8TDN6 353 aaKnown RBP3.57□□□□□ -1.84
SCFD1-204ENST00000463622 HTR3CQ8WXA8 447 aa3.57□□□□□ -1.84
SCFD1-204ENST00000463622 CPT1BQ92523 772 aa3.57□□□□□ -1.84
SCFD1-204ENST00000463622 REPS1Q96D71 796 aa3.57□□□□□ -1.84
SCFD1-204ENST00000463622 RTP4Q96DX8 246 aa3.57□□□□□ -1.84
SCFD1-204ENST00000463622 CCDC114Q96M63 670 aa3.57□□□□□ -1.84
SCFD1-204ENST00000463622 AGAP3Q96P47 875 aa3.57□□□□□ -1.84
SCFD1-204ENST00000463622 TSGA13Q96PP4 275 aa3.57□□□□□ -1.84
SCFD1-204ENST00000463622 APOL2Q9BQE5 337 aa3.57□□□□□ -1.84
SCFD1-204ENST00000463622 MAK16Q9BXY0 300 aaKnown RBP3.57□□□□□ -1.84
SCFD1-204ENST00000463622 TM6SF2Q9BZW4 377 aa3.57□□□□□ -1.84
SCFD1-204ENST00000463622 SLC25A18Q9H1K4 315 aa3.57□□□□□ -1.84
SCFD1-204ENST00000463622 PLAC1Q9HBJ0 212 aa3.57□□□□□ -1.84
SCFD1-204ENST00000463622 NT5MQ9NPB1 228 aa3.57□□□□□ -1.84
SCFD1-204ENST00000463622 VPS28Q9UK41 221 aa3.57□□□□□ -1.84
SCFD1-204ENST00000463622 SATB2Q9UPW6 733 aa3.57□□□□□ -1.84
SCFD1-204ENST00000463622 SNX24Q9Y343 169 aa3.57□□□□□ -1.84
SCFD1-204ENST00000463622 NUMA1Q14980 2115 aa3.57□□□□□ -1.84
SCFD1-204ENST00000463622 TARSL2A2RTX5 802 aaKnown RBP3.56□□□□□ -1.84
SCFD1-204ENST00000463622 FAM47DPA6NHR8 397 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 LINC01548A6NM66 108 aa3.56□□□□□ -1.84
SCFD1-204ENST00000463622 GOLGA8MH3BSY2 632 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms