RNA–Protein interactions for RNA: ENST00000463487.1

COL9A3-204, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 760 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-204ENST00000463487 SLC6A20Q9NP91 592 aa19.01■□□□□ 0.63
COL9A3-204ENST00000463487 PLAAQ9Y263 795 aa19.01■□□□□ 0.63
COL9A3-204ENST00000463487 AP1M2Q9Y6Q5 423 aa19.01■□□□□ 0.63
COL9A3-204ENST00000463487 SRPX2O60687 465 aaPredicted RBP19■□□□□ 0.63
COL9A3-204ENST00000463487 CPNE3O75131 537 aaKnown RBP19■□□□□ 0.63
COL9A3-204ENST00000463487 SMIM24O75264 130 aa19■□□□□ 0.63
COL9A3-204ENST00000463487 SCRG1O75711 98 aa19■□□□□ 0.63
COL9A3-204ENST00000463487 STK16O75716 305 aa19■□□□□ 0.63
COL9A3-204ENST00000463487 GSTA1P08263 222 aa19■□□□□ 0.63
COL9A3-204ENST00000463487 HBQ1P09105 142 aa19■□□□□ 0.63
COL9A3-204ENST00000463487 LIPCP11150 499 aa19■□□□□ 0.63
COL9A3-204ENST00000463487 GGT5P36269 586 aa19■□□□□ 0.63
COL9A3-204ENST00000463487 ATP1A2P50993 1020 aa19■□□□□ 0.63
COL9A3-204ENST00000463487 TECRLQ5HYJ1 363 aa19■□□□□ 0.63
COL9A3-204ENST00000463487 FCRL6Q6DN72 434 aa19■□□□□ 0.63
COL9A3-204ENST00000463487 TLDC1Q6P9B6 456 aa19■□□□□ 0.63
COL9A3-204ENST00000463487 MCATQ8IVS2 390 aaKnown RBP19■□□□□ 0.63
COL9A3-204ENST00000463487 KLHDC8AQ8IYD2 350 aa19■□□□□ 0.63
COL9A3-204ENST00000463487 KDF1Q8NAX2 398 aaPredicted RBP19■□□□□ 0.63
COL9A3-204ENST00000463487 OR2W6PQ8NHA6 318 aa19■□□□□ 0.63
COL9A3-204ENST00000463487 KCNE4Q8WWG9 221 aa19■□□□□ 0.63
COL9A3-204ENST00000463487 RERGQ96A58 199 aaPredicted RBP19■□□□□ 0.63
COL9A3-204ENST00000463487 MRPL57Q9BQC6 102 aaKnown RBP19■□□□□ 0.63
COL9A3-204ENST00000463487 SELENOSQ9BQE4 189 aa19■□□□□ 0.63
COL9A3-204ENST00000463487 MRPL46Q9H2W6 279 aaKnown RBP19■□□□□ 0.63
COL9A3-204ENST00000463487 EURLQ9NYK6 297 aa19■□□□□ 0.63
COL9A3-204ENST00000463487 DCDC2Q9UHG0 476 aa19■□□□□ 0.63
COL9A3-204ENST00000463487 PTBP2Q9UKA9 531 aaKnown RBP19■□□□□ 0.63
COL9A3-204ENST00000463487 SLC22A14Q9Y267 594 aa19■□□□□ 0.63
COL9A3-204ENST00000463487 TMEM184BQ9Y519 407 aaPredicted RBP19■□□□□ 0.63
COL9A3-204ENST00000463487 UBXN8O00124 270 aa18.99■□□□□ 0.63
COL9A3-204ENST00000463487 NPPBP16860 134 aa18.99■□□□□ 0.63
COL9A3-204ENST00000463487 GNAZP19086 355 aa18.99■□□□□ 0.63
COL9A3-204ENST00000463487 GMPRP36959 345 aa18.99■□□□□ 0.63
COL9A3-204ENST00000463487 SLC6A12P48065 614 aa18.99■□□□□ 0.63
COL9A3-204ENST00000463487 CCR8P51685 355 aa18.99■□□□□ 0.63
COL9A3-204ENST00000463487 RPS15AP62244 130 aaKnown RBP18.99■□□□□ 0.63
COL9A3-204ENST00000463487 MAP7Q14244 749 aa18.99■□□□□ 0.63
COL9A3-204ENST00000463487 DEFB110Q30KQ9 67 aa18.99■□□□□ 0.63
COL9A3-204ENST00000463487 ZNF425Q6IV72 752 aa18.99■□□□□ 0.63
COL9A3-204ENST00000463487 PWWP2BQ6NUJ5 590 aa18.99■□□□□ 0.63
COL9A3-204ENST00000463487 LRRC69Q6ZNQ3 347 aa18.99■□□□□ 0.63
COL9A3-204ENST00000463487 RNF44Q7L0R7 432 aa18.99■□□□□ 0.63
COL9A3-204ENST00000463487 LRRC70Q7Z2Q7 622 aa18.99■□□□□ 0.63
COL9A3-204ENST00000463487 PAQR7Q86WK9 346 aa18.99■□□□□ 0.63
COL9A3-204ENST00000463487 PROSER1Q86XN7 944 aa18.99■□□□□ 0.63
COL9A3-204ENST00000463487 PLD6Q8N2A8 252 aaKnown RBP18.99■□□□□ 0.63
COL9A3-204ENST00000463487 ESX1Q8N693 406 aa18.99■□□□□ 0.63
COL9A3-204ENST00000463487 SLC5A11Q8WWX8 675 aa18.99■□□□□ 0.63
COL9A3-204ENST00000463487 GPR78Q96P69 363 aa18.99■□□□□ 0.63
COL9A3-204ENST00000463487 DPH1Q9BZG8 443 aa18.99■□□□□ 0.63
COL9A3-204ENST00000463487 DNAJC11Q9NVH1 559 aa18.99■□□□□ 0.63
COL9A3-204ENST00000463487 ARGLU1Q9NWB6 273 aaPredicted RBP18.99■□□□□ 0.63
COL9A3-204ENST00000463487 GPRC5BQ9NZH0 403 aa18.99■□□□□ 0.63
COL9A3-204ENST00000463487 CPSF2Q9P2I0 782 aaKnown RBP18.99■□□□□ 0.63
COL9A3-204ENST00000463487 XPR1Q9UBH6 696 aa18.99■□□□□ 0.63
COL9A3-204ENST00000463487 SRPK3Q9UPE1 567 aa18.99■□□□□ 0.63
COL9A3-204ENST00000463487 PCDHB3Q9Y5E6 796 aa18.99■□□□□ 0.63
COL9A3-204ENST00000463487 TNPO3Q9Y5L0 923 aaKnown RBP18.99■□□□□ 0.63
COL9A3-204ENST00000463487 CEP295Q9C0D2 2601 aa18.99■□□□□ 0.63
COL9A3-204ENST00000463487 SNRNP200O75643 2136 aaKnown RBP18.98■□□□□ 0.63
COL9A3-204ENST00000463487 H7BY64 318 aa18.98■□□□□ 0.63
COL9A3-204ENST00000463487 GOLGA8RI6L899 631 aa18.98■□□□□ 0.63
COL9A3-204ENST00000463487 TXNDC9O14530 226 aa18.98■□□□□ 0.63
COL9A3-204ENST00000463487 ZSCAN9O15535 394 aaPredicted RBP18.98■□□□□ 0.63
COL9A3-204ENST00000463487 GLRA3O75311 464 aa18.98■□□□□ 0.63
COL9A3-204ENST00000463487 KIAA0754O94854 1291 aa18.98■□□□□ 0.63
COL9A3-204ENST00000463487 CCNYL3P0C7X3 344 aa18.98■□□□□ 0.63
COL9A3-204ENST00000463487 PYGBP11216 843 aa18.98■□□□□ 0.63
COL9A3-204ENST00000463487 CDH1P12830 882 aa18.98■□□□□ 0.63
COL9A3-204ENST00000463487 TAC1P20366 129 aa18.98■□□□□ 0.63
COL9A3-204ENST00000463487 CCT5P48643 541 aa18.98■□□□□ 0.63
COL9A3-204ENST00000463487 HSPA7P48741 367 aa18.98■□□□□ 0.63
COL9A3-204ENST00000463487 ALDH18A1P54886 795 aaKnown RBP18.98■□□□□ 0.63
COL9A3-204ENST00000463487 NLGN4XQ8N0W4 816 aa18.98■□□□□ 0.63
COL9A3-204ENST00000463487 SNX31Q8N9S9 440 aa18.98■□□□□ 0.63
COL9A3-204ENST00000463487 TTC29Q8NA56 475 aaPredicted RBP18.98■□□□□ 0.63
COL9A3-204ENST00000463487 NLGN4YQ8NFZ3 816 aaPredicted RBP18.98■□□□□ 0.63
COL9A3-204ENST00000463487 OR1L3Q8NH93 324 aa18.98■□□□□ 0.63
COL9A3-204ENST00000463487 MZB1Q8WU39 189 aa18.98■□□□□ 0.63
COL9A3-204ENST00000463487 PMEPA1Q969W9 287 aa18.98■□□□□ 0.63
COL9A3-204ENST00000463487 CLIP3Q96DZ5 547 aa18.98■□□□□ 0.63
COL9A3-204ENST00000463487 THAP11Q96EK4 314 aa18.98■□□□□ 0.63
COL9A3-204ENST00000463487 PRAP1Q96NZ9 151 aa18.98■□□□□ 0.63
COL9A3-204ENST00000463487 NDC1Q9BTX1 674 aa18.98■□□□□ 0.63
COL9A3-204ENST00000463487 TMEM109Q9BVC6 243 aa18.98■□□□□ 0.63
COL9A3-204ENST00000463487 NLNQ9BYT8 704 aa18.98■□□□□ 0.63
COL9A3-204ENST00000463487 CUEDC1Q9NWM3 386 aaPredicted RBP18.98■□□□□ 0.63
COL9A3-204ENST00000463487 OPTCQ9UBM4 332 aa18.98■□□□□ 0.63
COL9A3-204ENST00000463487 IGKV1-8A0A0C4DH67 115 aa18.97■□□□□ 0.63
COL9A3-204ENST00000463487 A0A0J9YVX5 310 aa18.97■□□□□ 0.63
COL9A3-204ENST00000463487 CLGNO14967 610 aa18.97■□□□□ 0.63
COL9A3-204ENST00000463487 CCNT2O60583 730 aaKnown RBP18.97■□□□□ 0.63
COL9A3-204ENST00000463487 CAPNS1P04632 268 aa18.97■□□□□ 0.63
COL9A3-204ENST00000463487 KLK3P07288 261 aaPredicted RBP18.97■□□□□ 0.63
COL9A3-204ENST00000463487 CXCR2P25025 360 aa18.97■□□□□ 0.63
COL9A3-204ENST00000463487 GABRA4P48169 554 aa18.97■□□□□ 0.63
COL9A3-204ENST00000463487 PIK3CGP48736 1102 aa18.97■□□□□ 0.63
COL9A3-204ENST00000463487 ARSFP54793 590 aa18.97■□□□□ 0.63
COL9A3-204ENST00000463487 CDC16Q13042 620 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms