RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 OR1D4P47884 311 aa8.74□□□□□ -1.01
BRCA1-207ENST00000461798 CARSP49589 748 aaKnown RBP8.74□□□□□ -1.01
BRCA1-207ENST00000461798 TERF1P54274 439 aa8.74□□□□□ -1.01
BRCA1-207ENST00000461798 PNLIPRP1P54315 467 aa8.74□□□□□ -1.01
BRCA1-207ENST00000461798 FOXL2P58012 376 aa8.74□□□□□ -1.01
BRCA1-207ENST00000461798 ARF3P61204 181 aaPredicted RBP8.74□□□□□ -1.01
BRCA1-207ENST00000461798 AIMP2Q13155 320 aaKnown RBP8.74□□□□□ -1.01
BRCA1-207ENST00000461798 MUM1Q2TAK8 710 aa8.74□□□□□ -1.01
BRCA1-207ENST00000461798 PLEKHN1Q494U1 663 aaPredicted RBP8.74□□□□□ -1.01
BRCA1-207ENST00000461798 CRB2Q5IJ48 1285 aa8.74□□□□□ -1.01
BRCA1-207ENST00000461798 GARNL3Q5VVW2 1013 aa8.74□□□□□ -1.01
BRCA1-207ENST00000461798 ICE2Q659A1 982 aa8.74□□□□□ -1.01
BRCA1-207ENST00000461798 IGFL2Q6UWQ7 119 aa8.74□□□□□ -1.01
BRCA1-207ENST00000461798 Q6ZS92 163 aa8.74□□□□□ -1.01
BRCA1-207ENST00000461798 SLC35F6Q8N357 371 aa8.74□□□□□ -1.01
BRCA1-207ENST00000461798 ARHGEF39Q8N4T4 335 aa8.74□□□□□ -1.01
BRCA1-207ENST00000461798 ZNF480Q8WV37 535 aa8.74□□□□□ -1.01
BRCA1-207ENST00000461798 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.74□□□□□ -1.01
BRCA1-207ENST00000461798 FAM136AQ96C01 138 aa8.74□□□□□ -1.01
BRCA1-207ENST00000461798 MVB12AQ96EY5 273 aa8.74□□□□□ -1.01
BRCA1-207ENST00000461798 VPS50Q96JG6 964 aa8.74□□□□□ -1.01
BRCA1-207ENST00000461798 PSMG3-AS1Q96PY0 264 aa8.74□□□□□ -1.01
BRCA1-207ENST00000461798 OR2A5Q96R48 311 aa8.74□□□□□ -1.01
BRCA1-207ENST00000461798 BARD1Q99728 777 aaKnown RBP8.74□□□□□ -1.01
BRCA1-207ENST00000461798 ZFYVE21Q9BQ24 234 aa8.74□□□□□ -1.01
BRCA1-207ENST00000461798 AARSD1Q9BTE6 412 aaKnown RBP8.74□□□□□ -1.01
BRCA1-207ENST00000461798 CCDC68Q9H2F9 335 aa8.74□□□□□ -1.01
BRCA1-207ENST00000461798 ZNF304Q9HCX3 659 aa8.74□□□□□ -1.01
BRCA1-207ENST00000461798 SLC6A20Q9NP91 592 aa8.74□□□□□ -1.01
BRCA1-207ENST00000461798 MRPS30Q9NP92 439 aaKnown RBP8.74□□□□□ -1.01
BRCA1-207ENST00000461798 SLAMF7Q9NQ25 335 aa8.74□□□□□ -1.01
BRCA1-207ENST00000461798 FBXO6Q9NRD1 293 aaPredicted RBP8.74□□□□□ -1.01
BRCA1-207ENST00000461798 SEMA3GQ9NS98 782 aa8.74□□□□□ -1.01
BRCA1-207ENST00000461798 C20orf96Q9NUD7 363 aaPredicted RBP8.74□□□□□ -1.01
BRCA1-207ENST00000461798 UTP6Q9NYH9 597 aaKnown RBP8.74□□□□□ -1.01
BRCA1-207ENST00000461798 ZC3H7BQ9UGR2 993 aaKnown RBP8.74□□□□□ -1.01
BRCA1-207ENST00000461798 PCYOX1Q9UHG3 505 aa8.74□□□□□ -1.01
BRCA1-207ENST00000461798 FBXO5Q9UKT4 447 aa8.74□□□□□ -1.01
BRCA1-207ENST00000461798 SNX12Q9UMY4 172 aa8.74□□□□□ -1.01
BRCA1-207ENST00000461798 VPS4AQ9UN37 437 aa8.74□□□□□ -1.01
BRCA1-207ENST00000461798 CDC14AQ9UNH5 594 aa8.74□□□□□ -1.01
BRCA1-207ENST00000461798 HS3ST3B1Q9Y662 390 aa8.74□□□□□ -1.01
BRCA1-207ENST00000461798 SNRNP200O75643 2136 aaKnown RBP8.74□□□□□ -1.01
BRCA1-207ENST00000461798 USP9XQ93008 2570 aaPredicted RBP8.73□□□□□ -1.01
BRCA1-207ENST00000461798 ANKRD12Q6UB98 2062 aa8.73□□□□□ -1.01
BRCA1-207ENST00000461798 KCNE1BA0A087WTH5 132 aa8.73□□□□□ -1.01
BRCA1-207ENST00000461798 A0A1W2PQ72 361 aa8.73□□□□□ -1.01
BRCA1-207ENST00000461798 CYSRT1A8MQ03 144 aa8.73□□□□□ -1.01
BRCA1-207ENST00000461798 TXNDC9O14530 226 aa8.73□□□□□ -1.01
BRCA1-207ENST00000461798 DNALI1O14645 258 aaPredicted RBP8.73□□□□□ -1.01
BRCA1-207ENST00000461798 ZBTB14O43829 449 aa8.73□□□□□ -1.01
BRCA1-207ENST00000461798 NRP2O60462 931 aa8.73□□□□□ -1.01
BRCA1-207ENST00000461798 VPS26AO75436 327 aa8.73□□□□□ -1.01
BRCA1-207ENST00000461798 TTC4O95801 387 aa8.73□□□□□ -1.01
BRCA1-207ENST00000461798 PGAM1P18669 254 aa8.73□□□□□ -1.01
BRCA1-207ENST00000461798 GNLYP22749 145 aa8.73□□□□□ -1.01
BRCA1-207ENST00000461798 HRH2P25021 359 aa8.73□□□□□ -1.01
BRCA1-207ENST00000461798 IVDP26440 423 aa8.73□□□□□ -1.01
BRCA1-207ENST00000461798 TIAL1Q01085 375 aaKnown RBP eCLIP8.73□□□□□ -1.01
BRCA1-207ENST00000461798 PTK6Q13882 451 aa8.73□□□□□ -1.01
BRCA1-207ENST00000461798 HSP90AA5PQ58FG0 334 aa8.73□□□□□ -1.01
BRCA1-207ENST00000461798 PRAMEF13Q5VWM6 474 aa8.73□□□□□ -1.01
BRCA1-207ENST00000461798 ATG9BQ674R7 924 aa8.73□□□□□ -1.01
BRCA1-207ENST00000461798 LRRC8EQ6NSJ5 796 aa8.73□□□□□ -1.01
BRCA1-207ENST00000461798 SUSD1Q6UWL2 747 aa8.73□□□□□ -1.01
BRCA1-207ENST00000461798 KIAA0408Q6ZU52 694 aa8.73□□□□□ -1.01
BRCA1-207ENST00000461798 PCGF5Q86SE9 256 aa8.73□□□□□ -1.01
BRCA1-207ENST00000461798 GALNT7Q86SF2 657 aa8.73□□□□□ -1.01
BRCA1-207ENST00000461798 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.73□□□□□ -1.01
BRCA1-207ENST00000461798 C2CD4AQ8NCU7 369 aaPredicted RBP8.73□□□□□ -1.01
BRCA1-207ENST00000461798 OR11G2Q8NGC1 345 aa8.73□□□□□ -1.01
BRCA1-207ENST00000461798 STT3BQ8TCJ2 826 aa8.73□□□□□ -1.01
BRCA1-207ENST00000461798 CD200R1Q8TD46 325 aa8.73□□□□□ -1.01
BRCA1-207ENST00000461798 TM9SF4Q92544 642 aa8.73□□□□□ -1.01
BRCA1-207ENST00000461798 C10orf90Q96M02 699 aa8.73□□□□□ -1.01
BRCA1-207ENST00000461798 GPR21Q99679 349 aa8.73□□□□□ -1.01
BRCA1-207ENST00000461798 EBNA1BP2Q99848 306 aaKnown RBP8.73□□□□□ -1.01
BRCA1-207ENST00000461798 FAM167BQ9BTA0 163 aa8.73□□□□□ -1.01
BRCA1-207ENST00000461798 NAT9Q9BTE0 207 aa8.73□□□□□ -1.01
BRCA1-207ENST00000461798 ACAT2Q9BWD1 397 aa8.73□□□□□ -1.01
BRCA1-207ENST00000461798 SYNPO2LQ9H987 977 aa8.73□□□□□ -1.01
BRCA1-207ENST00000461798 CTSFQ9UBX1 484 aa8.73□□□□□ -1.01
BRCA1-207ENST00000461798 CDC23Q9UJX2 597 aa8.73□□□□□ -1.01
BRCA1-207ENST00000461798 FBXL4Q9UKA2 621 aa8.73□□□□□ -1.01
BRCA1-207ENST00000461798 B3GNT3Q9Y2A9 372 aa8.73□□□□□ -1.01
BRCA1-207ENST00000461798 MAD1L1Q9Y6D9 718 aa8.73□□□□□ -1.01
BRCA1-207ENST00000461798 USP9YO00507 2555 aaPredicted RBP8.73□□□□□ -1.01
BRCA1-207ENST00000461798 MAST4O15021 2626 aa8.73□□□□□ -1.01
BRCA1-207ENST00000461798 DOPEY2Q9Y3R5 2298 aa8.73□□□□□ -1.01
BRCA1-207ENST00000461798 MASP2O00187 686 aa8.72□□□□□ -1.01
BRCA1-207ENST00000461798 SMAPO00193 183 aa8.72□□□□□ -1.01
BRCA1-207ENST00000461798 PCDH17O14917 1159 aa8.72□□□□□ -1.01
BRCA1-207ENST00000461798 SLC16A5O15375 505 aa8.72□□□□□ -1.01
BRCA1-207ENST00000461798 PRPF4O43172 522 aaKnown RBP eCLIP8.72□□□□□ -1.015e-17■■■■■ 29.7
BRCA1-207ENST00000461798 EIF2S1P05198 315 aaKnown RBP8.72□□□□□ -1.01
BRCA1-207ENST00000461798 ZGLP1P0C6A0 271 aa8.72□□□□□ -1.01
BRCA1-207ENST00000461798 GP1BBP13224 206 aa8.72□□□□□ -1.01
BRCA1-207ENST00000461798 EZRP15311 586 aaKnown RBP8.72□□□□□ -1.01
BRCA1-207ENST00000461798 TCP1P17987 556 aaKnown RBP8.72□□□□□ -1.01
BRCA1-207ENST00000461798 GABRB3P28472 473 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms