RNA–Protein interactions for RNA: ENST00000460770.1

SYPL1-203, Transcript of synaptophysin like 1, humanhuman

TSL 1 (best)

Gene SYPL1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-203ENST00000460770 TMEM173Q86WV6 379 aaPredicted RBP2.03□□□□□ -2.08
SYPL1-203ENST00000460770 ADGRF2Q8IZF7 708 aa2.03□□□□□ -2.08
SYPL1-203ENST00000460770 NDUFAF2Q8N183 169 aa2.03□□□□□ -2.08
SYPL1-203ENST00000460770 CHURC1Q8WUH1 139 aa2.03□□□□□ -2.08
SYPL1-203ENST00000460770 SSMEM1Q8WWF3 244 aa2.03□□□□□ -2.08
SYPL1-203ENST00000460770 SAT2Q96F10 170 aaPredicted RBP2.03□□□□□ -2.08
SYPL1-203ENST00000460770 ZNF597Q96LX8 424 aa2.03□□□□□ -2.08
SYPL1-203ENST00000460770 SHARPINQ9H0F6 387 aa2.03□□□□□ -2.08
SYPL1-203ENST00000460770 PARLQ9H300 379 aa2.03□□□□□ -2.08
SYPL1-203ENST00000460770 OSGEPL1Q9H4B0 414 aa2.03□□□□□ -2.08
SYPL1-203ENST00000460770 SMARCAD1Q9H4L7 1026 aa2.03□□□□□ -2.08
SYPL1-203ENST00000460770 JPT2Q9H910 190 aa2.03□□□□□ -2.08
SYPL1-203ENST00000460770 TNFRSF19Q9NS68 423 aa2.03□□□□□ -2.08
SYPL1-203ENST00000460770 ANKEF1Q9NU02 776 aa2.03□□□□□ -2.08
SYPL1-203ENST00000460770 NSMCE4AQ9NXX6 385 aa2.03□□□□□ -2.08
SYPL1-203ENST00000460770 TBC1D29Q9UFV1 150 aa2.03□□□□□ -2.08
SYPL1-203ENST00000460770 IL17BQ9UHF5 180 aa2.03□□□□□ -2.08
SYPL1-203ENST00000460770 VPS28Q9UK41 221 aa2.03□□□□□ -2.08
SYPL1-203ENST00000460770 NOL7Q9UMY1 257 aaKnown RBP2.03□□□□□ -2.08
SYPL1-203ENST00000460770 ZNF256Q9Y2P7 627 aaPredicted RBP2.03□□□□□ -2.08
SYPL1-203ENST00000460770 TTLL3Q9Y4R7 772 aa2.03□□□□□ -2.08
SYPL1-203ENST00000460770 PCDH11YQ9BZA8 1340 aa2.02□□□□□ -2.09
SYPL1-203ENST00000460770 IGLV4-3A0A075B6K6 122 aa2.02□□□□□ -2.09
SYPL1-203ENST00000460770 A0A087WUV0 522 aaPredicted RBP2.02□□□□□ -2.09
SYPL1-203ENST00000460770 A0A1W2PRQ8 180 aa2.02□□□□□ -2.09
SYPL1-203ENST00000460770 ANKUB1A6NFN9 424 aa2.02□□□□□ -2.09
SYPL1-203ENST00000460770 HEPACAM2A8MVW5 462 aa2.02□□□□□ -2.09
SYPL1-203ENST00000460770 SHISA9B4DS77 424 aa2.02□□□□□ -2.09
SYPL1-203ENST00000460770 F5H0A9 414 aaPredicted RBP2.02□□□□□ -2.09
SYPL1-203ENST00000460770 HAT1O14929 419 aa2.02□□□□□ -2.09
SYPL1-203ENST00000460770 DOK2O60496 412 aa2.02□□□□□ -2.09
SYPL1-203ENST00000460770 SH3BGRLO75368 114 aa2.02□□□□□ -2.09
SYPL1-203ENST00000460770 AKR1B1P15121 316 aa2.02□□□□□ -2.09
SYPL1-203ENST00000460770 ALOX12P18054 663 aa2.02□□□□□ -2.09
SYPL1-203ENST00000460770 KLK2P20151 261 aa2.02□□□□□ -2.09
SYPL1-203ENST00000460770 ACSL1P33121 698 aa2.02□□□□□ -2.09
SYPL1-203ENST00000460770 ACTN2P35609 894 aa2.02□□□□□ -2.09
SYPL1-203ENST00000460770 MFAP4P55083 255 aa2.02□□□□□ -2.09
SYPL1-203ENST00000460770 DHODHQ02127 395 aa2.02□□□□□ -2.09
SYPL1-203ENST00000460770 CCDC184Q52MB2 194 aa2.02□□□□□ -2.09
SYPL1-203ENST00000460770 RNLSQ5VYX0 342 aa2.02□□□□□ -2.09
SYPL1-203ENST00000460770 LEKR1Q6ZMV7 388 aa2.02□□□□□ -2.09
SYPL1-203ENST00000460770 Q6ZVH6 145 aa2.02□□□□□ -2.09
SYPL1-203ENST00000460770 FCRLAQ7L513 359 aa2.02□□□□□ -2.09
SYPL1-203ENST00000460770 LDB1Q86U70 411 aaPredicted RBP2.02□□□□□ -2.09
SYPL1-203ENST00000460770 CATSPER3Q86XQ3 398 aa2.02□□□□□ -2.09
SYPL1-203ENST00000460770 OR4N5Q8IXE1 308 aa2.02□□□□□ -2.09
SYPL1-203ENST00000460770 LSMEM1Q8N8F7 131 aa2.02□□□□□ -2.09
SYPL1-203ENST00000460770 MCUQ8NE86 351 aa2.02□□□□□ -2.09
SYPL1-203ENST00000460770 OR4D10Q8NGI6 311 aa2.02□□□□□ -2.09
SYPL1-203ENST00000460770 OR10G7Q8NGN6 311 aa2.02□□□□□ -2.09
SYPL1-203ENST00000460770 TYMSOSQ8TAI1 123 aa2.02□□□□□ -2.09
SYPL1-203ENST00000460770 RSRC1Q96IZ7 334 aaKnown RBP2.02□□□□□ -2.09
SYPL1-203ENST00000460770 C4orf45Q96LM5 186 aa2.02□□□□□ -2.09
SYPL1-203ENST00000460770 TREX2Q9BQ50 279 aaPredicted RBP2.02□□□□□ -2.09
SYPL1-203ENST00000460770 ZNF577Q9BSK1 485 aa2.02□□□□□ -2.09
SYPL1-203ENST00000460770 UBAC1Q9BSL1 405 aa2.02□□□□□ -2.09
SYPL1-203ENST00000460770 RBM24Q9BX46 236 aaKnown RBP2.02□□□□□ -2.09
SYPL1-203ENST00000460770 MMP27Q9H306 513 aa2.02□□□□□ -2.09
SYPL1-203ENST00000460770 EIF2B3Q9NR50 452 aaKnown RBP2.02□□□□□ -2.09
SYPL1-203ENST00000460770 ARHGEF38Q9NXL2 777 aa2.02□□□□□ -2.09
SYPL1-203ENST00000460770 NKIRAS2Q9NYR9 191 aa2.02□□□□□ -2.09
SYPL1-203ENST00000460770 ADD3Q9UEY8 706 aaKnown RBP2.02□□□□□ -2.09
SYPL1-203ENST00000460770 KIF25-AS1Q9Y6Z4 181 aa2.02□□□□□ -2.09
SYPL1-203ENST00000460770 TDRD15B5MCY1 1934 aaKnown RBP2.01□□□□□ -2.09
SYPL1-203ENST00000460770 LOC100509620A0A075B734 347 aa2.01□□□□□ -2.09
SYPL1-203ENST00000460770 ARPC2O15144 300 aa2.01□□□□□ -2.09
SYPL1-203ENST00000460770 IPO8O15397 1037 aaKnown RBP2.01□□□□□ -2.09
SYPL1-203ENST00000460770 P4HA2O15460 535 aa2.01□□□□□ -2.09
SYPL1-203ENST00000460770 PLOD3O60568 738 aa2.01□□□□□ -2.09
SYPL1-203ENST00000460770 OR2C1O95371 312 aa2.01□□□□□ -2.09
SYPL1-203ENST00000460770 RPN1P04843 607 aaKnown RBP2.01□□□□□ -2.09
SYPL1-203ENST00000460770 FDPSP14324 419 aaKnown RBP2.01□□□□□ -2.09
SYPL1-203ENST00000460770 ATP6V1B1P15313 513 aa2.01□□□□□ -2.09
SYPL1-203ENST00000460770 BCL3P20749 454 aa2.01□□□□□ -2.09
SYPL1-203ENST00000460770 GABRA5P31644 462 aa2.01□□□□□ -2.09
SYPL1-203ENST00000460770 GCNT1Q02742 428 aa2.01□□□□□ -2.09
SYPL1-203ENST00000460770 EIF4EBP2Q13542 120 aaPredicted RBP2.01□□□□□ -2.09
SYPL1-203ENST00000460770 CUL4AQ13619 759 aa2.01□□□□□ -2.09
SYPL1-203ENST00000460770 WTAPQ15007 396 aa2.01□□□□□ -2.09
SYPL1-203ENST00000460770 PTPN14Q15678 1187 aa2.01□□□□□ -2.09
SYPL1-203ENST00000460770 ALDH1L2Q3SY69 923 aa2.01□□□□□ -2.09
SYPL1-203ENST00000460770 PRR30Q53SZ7 412 aaPredicted RBP2.01□□□□□ -2.09
SYPL1-203ENST00000460770 RILPL1Q5EBL4 403 aa2.01□□□□□ -2.09
SYPL1-203ENST00000460770 SPDYCQ5MJ68 293 aa2.01□□□□□ -2.09
SYPL1-203ENST00000460770 C1QTNF12Q5T7M4 302 aa2.01□□□□□ -2.09
SYPL1-203ENST00000460770 C3P1Q6ZMU1 363 aa2.01□□□□□ -2.09
SYPL1-203ENST00000460770 BRINP3Q76B58 766 aa2.01□□□□□ -2.09
SYPL1-203ENST00000460770 KRT77Q7Z794 578 aa2.01□□□□□ -2.09
SYPL1-203ENST00000460770 KRTAP11-1Q8IUC1 163 aa2.01□□□□□ -2.09
SYPL1-203ENST00000460770 CEP57L1Q8IYX8 460 aa2.01□□□□□ -2.09
SYPL1-203ENST00000460770 ABCA7Q8IZY2 2146 aa2.01□□□□□ -2.09
SYPL1-203ENST00000460770 WDTC1Q8N5D0 677 aa2.01□□□□□ -2.09
SYPL1-203ENST00000460770 FAM89BQ8N5H3 189 aa2.01□□□□□ -2.09
SYPL1-203ENST00000460770 POC5Q8NA72 575 aa2.01□□□□□ -2.09
SYPL1-203ENST00000460770 C11orf45Q8TAV5 145 aa2.01□□□□□ -2.09
SYPL1-203ENST00000460770 USP6NLQ92738 828 aa2.01□□□□□ -2.09
SYPL1-203ENST00000460770 THOC1Q96FV9 657 aaKnown RBP2.01□□□□□ -2.09
SYPL1-203ENST00000460770 SFXN2Q96NB2 322 aa2.01□□□□□ -2.09
SYPL1-203ENST00000460770 ZIM3Q96PE6 472 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms