RNA–Protein interactions for RNA: ENST00000460333.5

VPS13D-202, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 4,910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-202ENST00000460333 ERVK-8P63133 956 aa6.04□□□□□ -1.44
VPS13D-202ENST00000460333 DEFA5Q01523 94 aa6.04□□□□□ -1.44
VPS13D-202ENST00000460333 TAGLNQ01995 201 aaKnown RBP6.04□□□□□ -1.44
VPS13D-202ENST00000460333 DDX39BQ13838 428 aaKnown RBP6.04□□□□□ -1.44
VPS13D-202ENST00000460333 CEACAM7Q14002 265 aa6.04□□□□□ -1.44
VPS13D-202ENST00000460333 IQCCQ4KMZ1 466 aa6.04□□□□□ -1.44
VPS13D-202ENST00000460333 TRMT10BQ6PF06 316 aaKnown RBP6.04□□□□□ -1.44
VPS13D-202ENST00000460333 GPR65Q8IYL9 337 aa6.04□□□□□ -1.44
VPS13D-202ENST00000460333 C15orf40Q8WUR7 153 aa6.04□□□□□ -1.44
VPS13D-202ENST00000460333 ELMO1Q92556 727 aa6.04□□□□□ -1.44
VPS13D-202ENST00000460333 PSMG2Q969U7 264 aa6.04□□□□□ -1.44
VPS13D-202ENST00000460333 ALPK1Q96QP1 1244 aa6.04□□□□□ -1.44
VPS13D-202ENST00000460333 PANX1Q96RD7 426 aa6.04□□□□□ -1.44
VPS13D-202ENST00000460333 PKMYT1Q99640 499 aa6.04□□□□□ -1.44
VPS13D-202ENST00000460333 DHRS4Q9BTZ2 278 aa6.04□□□□□ -1.44
VPS13D-202ENST00000460333 TTLL2Q9BWV7 592 aa6.04□□□□□ -1.44
VPS13D-202ENST00000460333 CHRAC1Q9NRG0 131 aa6.04□□□□□ -1.44
VPS13D-202ENST00000460333 WBP1LQ9NX94 342 aa6.04□□□□□ -1.44
VPS13D-202ENST00000460333 MOCS1Q9NZB8 636 aa6.04□□□□□ -1.44
VPS13D-202ENST00000460333 KIAA1522Q9P206 1035 aaPredicted RBP6.04□□□□□ -1.44
VPS13D-202ENST00000460333 UPB1Q9UBR1 384 aa6.04□□□□□ -1.44
VPS13D-202ENST00000460333 PCDHB9Q9Y5E1 797 aa6.04□□□□□ -1.44
VPS13D-202ENST00000460333 MYOCOSA0A1B0GUC4 107 aa6.03□□□□□ -1.44
VPS13D-202ENST00000460333 SYNDIG1LA6NDD5 238 aa6.03□□□□□ -1.44
VPS13D-202ENST00000460333 MAFKO60675 156 aa6.03□□□□□ -1.44
VPS13D-202ENST00000460333 SNX4O95219 450 aa6.03□□□□□ -1.44
VPS13D-202ENST00000460333 ANXA5P08758 320 aa6.03□□□□□ -1.44
VPS13D-202ENST00000460333 IL7RP16871 459 aa6.03□□□□□ -1.44
VPS13D-202ENST00000460333 DDX6P26196 483 aaKnown RBP eCLIP6.03□□□□□ -1.44
VPS13D-202ENST00000460333 ACSL1P33121 698 aa6.03□□□□□ -1.44
VPS13D-202ENST00000460333 GPC1P35052 558 aa6.03□□□□□ -1.44
VPS13D-202ENST00000460333 GRIA1P42261 906 aa6.03□□□□□ -1.44
VPS13D-202ENST00000460333 CRATP43155 626 aa6.03□□□□□ -1.44
VPS13D-202ENST00000460333 CLCQ05315 142 aa6.03□□□□□ -1.44
VPS13D-202ENST00000460333 CTBP1Q13363 440 aa6.03□□□□□ -1.44
VPS13D-202ENST00000460333 SMCO1Q147U7 214 aa6.03□□□□□ -1.44
VPS13D-202ENST00000460333 TEAD4Q15561 434 aa6.03□□□□□ -1.44
VPS13D-202ENST00000460333 SWI5Q1ZZU3 235 aa6.03□□□□□ -1.44
VPS13D-202ENST00000460333 ARMC12Q5T9G4 340 aa6.03□□□□□ -1.44
VPS13D-202ENST00000460333 PIK3R6Q5UE93 754 aa6.03□□□□□ -1.44
VPS13D-202ENST00000460333 AGAP6Q5VW22 663 aa6.03□□□□□ -1.44
VPS13D-202ENST00000460333 LYPLAL1Q5VWZ2 237 aa6.03□□□□□ -1.44
VPS13D-202ENST00000460333 TMEM236Q5W0B7 351 aa6.03□□□□□ -1.44
VPS13D-202ENST00000460333 C16orf59Q7L2K0 433 aa6.03□□□□□ -1.44
VPS13D-202ENST00000460333 GLT6D1Q7Z4J2 308 aa6.03□□□□□ -1.44
VPS13D-202ENST00000460333 TAF8Q7Z7C8 310 aa6.03□□□□□ -1.44
VPS13D-202ENST00000460333 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.03□□□□□ -1.44
VPS13D-202ENST00000460333 TIGD4Q8IY51 512 aa6.03□□□□□ -1.44
VPS13D-202ENST00000460333 ZNF655Q8N720 491 aaPredicted RBP6.03□□□□□ -1.44
VPS13D-202ENST00000460333 SPATA22Q8NHS9 363 aa6.03□□□□□ -1.44
VPS13D-202ENST00000460333 FATE1Q969F0 183 aa6.03□□□□□ -1.44
VPS13D-202ENST00000460333 BIRC7Q96CA5 298 aa6.03□□□□□ -1.44
VPS13D-202ENST00000460333 LGALS12Q96DT0 336 aa6.03□□□□□ -1.44
VPS13D-202ENST00000460333 AGAP4Q96P64 663 aa6.03□□□□□ -1.44
VPS13D-202ENST00000460333 KLHL5Q96PQ7 755 aa6.03□□□□□ -1.44
VPS13D-202ENST00000460333 RAD9AQ99638 391 aa6.03□□□□□ -1.44
VPS13D-202ENST00000460333 UQCC2Q9BRT2 126 aa6.03□□□□□ -1.44
VPS13D-202ENST00000460333 TM9SF3Q9HD45 589 aa6.03□□□□□ -1.44
VPS13D-202ENST00000460333 IL23AQ9NPF7 189 aa6.03□□□□□ -1.44
VPS13D-202ENST00000460333 SACM1LQ9NTJ5 587 aa6.03□□□□□ -1.44
VPS13D-202ENST00000460333 MARCH5Q9NX47 278 aa6.03□□□□□ -1.44
VPS13D-202ENST00000460333 NUDT4Q9NZJ9 180 aa6.03□□□□□ -1.44
VPS13D-202ENST00000460333 POFUT2Q9Y2G5 429 aa6.03□□□□□ -1.44
VPS13D-202ENST00000460333 MRPS7Q9Y2R9 242 aaKnown RBP6.03□□□□□ -1.44
VPS13D-202ENST00000460333 INSL5Q9Y5Q6 135 aa6.03□□□□□ -1.44
VPS13D-202ENST00000460333 MAGED1Q9Y5V3 778 aaPredicted RBP6.03□□□□□ -1.44
VPS13D-202ENST00000460333 CXorf49A8MYA2 514 aaPredicted RBP6.03□□□□□ -1.44
VPS13D-202ENST00000460333 AP3D1O14617 1153 aa6.03□□□□□ -1.44
VPS13D-202ENST00000460333 PIP5K1BO14986 540 aa6.03□□□□□ -1.44
VPS13D-202ENST00000460333 SLC7A4O43246 635 aa6.03□□□□□ -1.44
VPS13D-202ENST00000460333 BUD23O43709 281 aaKnown RBP6.03□□□□□ -1.44
VPS13D-202ENST00000460333 EPOP01588 193 aa6.03□□□□□ -1.44
VPS13D-202ENST00000460333 ANXA3P12429 323 aa6.03□□□□□ -1.44
VPS13D-202ENST00000460333 PFKLP17858 780 aa6.03□□□□□ -1.44
VPS13D-202ENST00000460333 LCN1P31025 176 aa6.03□□□□□ -1.44
VPS13D-202ENST00000460333 ALDH3B2P48448 385 aa6.03□□□□□ -1.44
VPS13D-202ENST00000460333 SERINC3Q13530 473 aa6.03□□□□□ -1.44
VPS13D-202ENST00000460333 GALNT3Q14435 633 aa6.03□□□□□ -1.44
VPS13D-202ENST00000460333 MEP1AQ16819 746 aa6.03□□□□□ -1.44
VPS13D-202ENST00000460333 LCN8Q6JVE9 175 aa6.03□□□□□ -1.44
VPS13D-202ENST00000460333 ARMC6Q6NXE6 501 aa6.03□□□□□ -1.44
VPS13D-202ENST00000460333 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.03□□□□□ -1.44
VPS13D-202ENST00000460333 C14orf80Q86SX3 495 aa6.03□□□□□ -1.44
VPS13D-202ENST00000460333 SLC30A8Q8IWU4 369 aa6.03□□□□□ -1.44
VPS13D-202ENST00000460333 SLC39A11Q8N1S5 342 aa6.03□□□□□ -1.44
VPS13D-202ENST00000460333 NPWQ8N729 165 aa6.03□□□□□ -1.44
VPS13D-202ENST00000460333 OR52L1Q8NGH7 329 aa6.03□□□□□ -1.44
VPS13D-202ENST00000460333 VANGL1Q8TAA9 524 aaPredicted RBP6.03□□□□□ -1.44
VPS13D-202ENST00000460333 SLC39A13Q96H72 371 aa6.03□□□□□ -1.44
VPS13D-202ENST00000460333 MUS81Q96NY9 551 aa6.03□□□□□ -1.44
VPS13D-202ENST00000460333 C1QTNF1Q9BXJ1 281 aa6.03□□□□□ -1.44
VPS13D-202ENST00000460333 SMURF1Q9HCE7 757 aa6.03□□□□□ -1.44
VPS13D-202ENST00000460333 CRYL1Q9Y2S2 319 aa6.03□□□□□ -1.44
VPS13D-202ENST00000460333 A0A1W2PP18 115 aa6.03□□□□□ -1.44
VPS13D-202ENST00000460333 ZNF840PA6NDX5 716 aa6.03□□□□□ -1.44
VPS13D-202ENST00000460333 OR10H3O60404 316 aa6.03□□□□□ -1.44
VPS13D-202ENST00000460333 SLC19A2O60779 497 aa6.03□□□□□ -1.44
VPS13D-202ENST00000460333 PRAMEF11O60813 436 aa6.03□□□□□ -1.44
VPS13D-202ENST00000460333 CCNB2O95067 398 aa6.03□□□□□ -1.44
VPS13D-202ENST00000460333 PAPSS2O95340 614 aaPredicted RBP6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms