RNA–Protein interactions for RNA: ENST00000459788.1

HDLBP-228, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-228ENST00000459788 FAM53BQ14153 422 aa9.56□□□□□ -0.88
HDLBP-228ENST00000459788 UBAP2LQ14157 1087 aaKnown RBP9.56□□□□□ -0.88
HDLBP-228ENST00000459788 SLC9A5Q14940 896 aa9.56□□□□□ -0.88
HDLBP-228ENST00000459788 HSP90AA5PQ58FG0 334 aa9.56□□□□□ -0.88
HDLBP-228ENST00000459788 JMJD6Q6NYC1 403 aaPredicted RBP9.56□□□□□ -0.88
HDLBP-228ENST00000459788 FBXO42Q6P3S6 717 aa9.56□□□□□ -0.88
HDLBP-228ENST00000459788 ZNF549Q6P9A3 640 aa9.56□□□□□ -0.88
HDLBP-228ENST00000459788 TAX1BP1Q86VP1 789 aa9.56□□□□□ -0.88
HDLBP-228ENST00000459788 PAQR7Q86WK9 346 aa9.56□□□□□ -0.88
HDLBP-228ENST00000459788 DENND6AQ8IWF6 608 aa9.56□□□□□ -0.88
HDLBP-228ENST00000459788 PALM2Q8IXS6 379 aa9.56□□□□□ -0.88
HDLBP-228ENST00000459788 LRRC56Q8IYG6 542 aaPredicted RBP9.56□□□□□ -0.88
HDLBP-228ENST00000459788 ZNF480Q8WV37 535 aa9.56□□□□□ -0.88
HDLBP-228ENST00000459788 ANKRD7Q92527 254 aa9.56□□□□□ -0.88
HDLBP-228ENST00000459788 PDLIM2Q96JY6 352 aa9.56□□□□□ -0.88
HDLBP-228ENST00000459788 CCDC138Q96M89 665 aa9.56□□□□□ -0.88
HDLBP-228ENST00000459788 PKP4Q99569 1192 aa9.56□□□□□ -0.88
HDLBP-228ENST00000459788 GPR21Q99679 349 aa9.56□□□□□ -0.88
HDLBP-228ENST00000459788 NUDT9Q9BW91 350 aa9.56□□□□□ -0.88
HDLBP-228ENST00000459788 SLC29A3Q9BZD2 475 aa9.56□□□□□ -0.88
HDLBP-228ENST00000459788 TGIF2Q9GZN2 237 aa9.56□□□□□ -0.88
HDLBP-228ENST00000459788 FBXO6Q9NRD1 293 aaPredicted RBP9.56□□□□□ -0.88
HDLBP-228ENST00000459788 TMEM184CQ9NVA4 438 aa9.56□□□□□ -0.88
HDLBP-228ENST00000459788 C14orf105Q9NVL8 296 aa9.56□□□□□ -0.88
HDLBP-228ENST00000459788 ZNF282Q9UDV7 671 aaPredicted RBP9.56□□□□□ -0.88
HDLBP-228ENST00000459788 ASIC3Q9UHC3 531 aa9.56□□□□□ -0.88
HDLBP-228ENST00000459788 TRMT6Q9UJA5 497 aaKnown RBP9.56□□□□□ -0.88
HDLBP-228ENST00000459788 KLHL20Q9Y2M5 609 aa9.56□□□□□ -0.88
HDLBP-228ENST00000459788 MAP4K5Q9Y4K4 846 aa9.56□□□□□ -0.88
HDLBP-228ENST00000459788 COL12A1Q99715 3063 aa9.56□□□□□ -0.88
HDLBP-228ENST00000459788 ZGRF1Q86YA3 2104 aa9.55□□□□□ -0.88
HDLBP-228ENST00000459788 DOPEY1Q5JWR5 2465 aa9.55□□□□□ -0.88
HDLBP-228ENST00000459788 TTLL8A6PVC2 850 aa9.55□□□□□ -0.88
HDLBP-228ENST00000459788 ZNF185O15231 689 aa9.55□□□□□ -0.88
HDLBP-228ENST00000459788 VPS4BO75351 444 aa9.55□□□□□ -0.88
HDLBP-228ENST00000459788 HAUS5O94927 633 aa9.55□□□□□ -0.88
HDLBP-228ENST00000459788 CTSBP07858 339 aa9.55□□□□□ -0.88
HDLBP-228ENST00000459788 NR1D1P20393 614 aa9.55□□□□□ -0.88
HDLBP-228ENST00000459788 IVDP26440 423 aa9.55□□□□□ -0.88
HDLBP-228ENST00000459788 PSMB5P28074 263 aa9.55□□□□□ -0.88
HDLBP-228ENST00000459788 AP1S2P56377 157 aa9.55□□□□□ -0.88
HDLBP-228ENST00000459788 CHAF1BQ13112 559 aa9.55□□□□□ -0.88
HDLBP-228ENST00000459788 FASTKQ14296 549 aaKnown RBP9.55□□□□□ -0.88
HDLBP-228ENST00000459788 NDUFA9Q16795 377 aa9.55□□□□□ -0.88
HDLBP-228ENST00000459788 TUBB8Q3ZCM7 444 aa9.55□□□□□ -0.88
HDLBP-228ENST00000459788 IRAK1BP1Q5VVH5 260 aa9.55□□□□□ -0.88
HDLBP-228ENST00000459788 PRAMEF13Q5VWM6 474 aa9.55□□□□□ -0.88
HDLBP-228ENST00000459788 STEAP4Q687X5 459 aa9.55□□□□□ -0.88
HDLBP-228ENST00000459788 IGFL2Q6UWQ7 119 aa9.55□□□□□ -0.88
HDLBP-228ENST00000459788 COX15Q7KZN9 410 aa9.55□□□□□ -0.88
HDLBP-228ENST00000459788 FAM20CQ8IXL6 584 aa9.55□□□□□ -0.88
HDLBP-228ENST00000459788 AGGF1Q8N302 714 aaeCLIP9.55□□□□□ -0.882e-9■□□□□ 10
HDLBP-228ENST00000459788 FAM26EQ8N5C1 309 aa9.55□□□□□ -0.88
HDLBP-228ENST00000459788 C2orf73Q8N5S3 287 aaPredicted RBP9.55□□□□□ -0.88
HDLBP-228ENST00000459788 GIMAP7Q8NHV1 300 aa9.55□□□□□ -0.88
HDLBP-228ENST00000459788 CPT1CQ8TCG5 803 aa9.55□□□□□ -0.88
HDLBP-228ENST00000459788 RERGQ96A58 199 aaPredicted RBP9.55□□□□□ -0.88
HDLBP-228ENST00000459788 PDLIM5Q96HC4 596 aaKnown RBP9.55□□□□□ -0.88
HDLBP-228ENST00000459788 OR2A5Q96R48 311 aa9.55□□□□□ -0.88
HDLBP-228ENST00000459788 DDX47Q9H0S4 455 aaKnown RBP9.55□□□□□ -0.88
HDLBP-228ENST00000459788 KCNF1Q9H3M0 494 aa9.55□□□□□ -0.88
HDLBP-228ENST00000459788 ZNF552Q9H707 407 aaPredicted RBP9.55□□□□□ -0.88
HDLBP-228ENST00000459788 PARVBQ9HBI1 364 aa9.55□□□□□ -0.88
HDLBP-228ENST00000459788 SLC6A20Q9NP91 592 aa9.55□□□□□ -0.88
HDLBP-228ENST00000459788 MKKSQ9NPJ1 570 aaPredicted RBP9.55□□□□□ -0.88
HDLBP-228ENST00000459788 SLAMF7Q9NQ25 335 aa9.55□□□□□ -0.88
HDLBP-228ENST00000459788 GALPQ9UBC7 116 aa9.55□□□□□ -0.88
HDLBP-228ENST00000459788 ZC3H7BQ9UGR2 993 aaKnown RBP9.55□□□□□ -0.88
HDLBP-228ENST00000459788 VPS4AQ9UN37 437 aa9.55□□□□□ -0.88
HDLBP-228ENST00000459788 RUVBL2Q9Y230 463 aaKnown RBP9.55□□□□□ -0.88
HDLBP-228ENST00000459788 SAR1BQ9Y6B6 198 aa9.55□□□□□ -0.88
HDLBP-228ENST00000459788 ICE1Q9Y2F5 2266 aa9.55□□□□□ -0.88
HDLBP-228ENST00000459788 SVILO95425 2214 aa9.55□□□□□ -0.88
HDLBP-228ENST00000459788 SCN3AQ9NY46 2000 aa9.55□□□□□ -0.88
HDLBP-228ENST00000459788 LOC105369274A0A096LPK9 316 aa9.54□□□□□ -0.88
HDLBP-228ENST00000459788 IGKV1-8A0A0C4DH67 115 aa9.54□□□□□ -0.88
HDLBP-228ENST00000459788 LOC102723532A0A0G2JNH3 316 aa9.54□□□□□ -0.88
HDLBP-228ENST00000459788 A0A0J9YVX5 310 aa9.54□□□□□ -0.88
HDLBP-228ENST00000459788 H0YGG7 62 aa9.54□□□□□ -0.88
HDLBP-228ENST00000459788 H0YIG0 161 aa9.54□□□□□ -0.88
HDLBP-228ENST00000459788 SOCS6O14544 535 aa9.54□□□□□ -0.88
HDLBP-228ENST00000459788 HPP00738 406 aa9.54□□□□□ -0.88
HDLBP-228ENST00000459788 ENO2P09104 434 aaPredicted RBP9.54□□□□□ -0.88
HDLBP-228ENST00000459788 HIST1H2AGP0C0S8 130 aaPredicted RBP9.54□□□□□ -0.88
HDLBP-228ENST00000459788 HIST1H2ADP20671 130 aa9.54□□□□□ -0.88
HDLBP-228ENST00000459788 FBLP22087 321 aaKnown RBP9.54□□□□□ -0.88
HDLBP-228ENST00000459788 IMPA1P29218 277 aa9.54□□□□□ -0.88
HDLBP-228ENST00000459788 SLC26A3P40879 764 aa9.54□□□□□ -0.88
HDLBP-228ENST00000459788 PAFAH1B1P43034 410 aa9.54□□□□□ -0.88
HDLBP-228ENST00000459788 ARF3P61204 181 aaPredicted RBP9.54□□□□□ -0.88
HDLBP-228ENST00000459788 RPS15AP62244 130 aaKnown RBP9.54□□□□□ -0.88
HDLBP-228ENST00000459788 DHX9Q08211 1270 aaKnown RBP9.54□□□□□ -0.88
HDLBP-228ENST00000459788 SLC6A19Q695T7 634 aa9.54□□□□□ -0.88
HDLBP-228ENST00000459788 FRMPD2BQ6IN97 320 aa9.54□□□□□ -0.88
HDLBP-228ENST00000459788 NIPAL1Q6NVV3 410 aa9.54□□□□□ -0.88
HDLBP-228ENST00000459788 HIBCHQ6NVY1 386 aaPredicted RBP9.54□□□□□ -0.88
HDLBP-228ENST00000459788 UBE2R2Q712K3 238 aaPredicted RBP9.54□□□□□ -0.88
HDLBP-228ENST00000459788 CREG2Q8IUH2 290 aa9.54□□□□□ -0.88
HDLBP-228ENST00000459788 IQCKQ8N0W5 287 aa9.54□□□□□ -0.88
HDLBP-228ENST00000459788 OR4N4Q8N0Y3 316 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms