RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 ABI3BPQ7Z7G0 1075 aa8.66□□□□□ -1.02
VPS50-207ENST00000458530 PROSER1Q86XN7 944 aa8.66□□□□□ -1.02
VPS50-207ENST00000458530 RGL4Q8IZJ4 473 aa8.66□□□□□ -1.02
VPS50-207ENST00000458530 MIER2Q8N344 545 aa8.66□□□□□ -1.02
VPS50-207ENST00000458530 TMEM145Q8NBT3 493 aa8.66□□□□□ -1.02
VPS50-207ENST00000458530 CADM4Q8NFZ8 388 aa8.66□□□□□ -1.02
VPS50-207ENST00000458530 RP9Q8TA86 221 aaKnown RBP8.66□□□□□ -1.02
VPS50-207ENST00000458530 SNX19Q92543 992 aa8.66□□□□□ -1.02
VPS50-207ENST00000458530 UBE2E3Q969T4 207 aa8.66□□□□□ -1.02
VPS50-207ENST00000458530 MCUR1Q96AQ8 359 aa8.66□□□□□ -1.02
VPS50-207ENST00000458530 PTCD3Q96EY7 689 aaKnown RBP8.66□□□□□ -1.02
VPS50-207ENST00000458530 C12orf66Q96MD2 445 aa8.66□□□□□ -1.02
VPS50-207ENST00000458530 KCNA7Q96RP8 456 aa8.66□□□□□ -1.02
VPS50-207ENST00000458530 EFCAB11Q9BUY7 163 aa8.66□□□□□ -1.02
VPS50-207ENST00000458530 GPR174Q9BXC1 333 aa8.66□□□□□ -1.02
VPS50-207ENST00000458530 ZDHHC5Q9C0B5 715 aa8.66□□□□□ -1.02
VPS50-207ENST00000458530 ATG10Q9H0Y0 220 aa8.66□□□□□ -1.02
VPS50-207ENST00000458530 C1orf21Q9H246 121 aa8.66□□□□□ -1.02
VPS50-207ENST00000458530 MMADHCQ9H3L0 296 aaPredicted RBP8.66□□□□□ -1.02
VPS50-207ENST00000458530 EHD1Q9H4M9 534 aa8.66□□□□□ -1.02
VPS50-207ENST00000458530 FGF22Q9HCT0 170 aa8.66□□□□□ -1.02
VPS50-207ENST00000458530 TNFRSF12AQ9NP84 129 aa8.66□□□□□ -1.02
VPS50-207ENST00000458530 WASH6PQ9NQA3 447 aa8.66□□□□□ -1.02
VPS50-207ENST00000458530 ARL8BQ9NVJ2 186 aa8.66□□□□□ -1.02
VPS50-207ENST00000458530 TRNAU1APQ9NX07 287 aaKnown RBP8.66□□□□□ -1.02
VPS50-207ENST00000458530 GULP1Q9UBP9 304 aa8.66□□□□□ -1.02
VPS50-207ENST00000458530 SLC22A14Q9Y267 594 aa8.66□□□□□ -1.02
VPS50-207ENST00000458530 BTRCQ9Y297 605 aa8.66□□□□□ -1.02
VPS50-207ENST00000458530 PRKAB1Q9Y478 270 aa8.66□□□□□ -1.02
VPS50-207ENST00000458530 ASB1Q9Y576 335 aa8.66□□□□□ -1.02
VPS50-207ENST00000458530 TIMM22Q9Y584 194 aa8.66□□□□□ -1.02
VPS50-207ENST00000458530 COLEC10Q9Y6Z7 277 aa8.66□□□□□ -1.02
VPS50-207ENST00000458530 NAV2Q8IVL1 2488 aa8.66□□□□□ -1.02
VPS50-207ENST00000458530 ABCA7Q8IZY2 2146 aa8.66□□□□□ -1.02
VPS50-207ENST00000458530 ADAMTS20P59510 1910 aa8.66□□□□□ -1.02
VPS50-207ENST00000458530 IGHV1OR15-9A0A0B4J2B8 117 aa8.65□□□□□ -1.02
VPS50-207ENST00000458530 A0A1W2PPC4 97 aa8.65□□□□□ -1.02
VPS50-207ENST00000458530 SERTM1A2A2V5 107 aa8.65□□□□□ -1.02
VPS50-207ENST00000458530 DYTNA2CJ06 578 aa8.65□□□□□ -1.02
VPS50-207ENST00000458530 POM121BA6NF01 834 aa8.65□□□□□ -1.02
VPS50-207ENST00000458530 C10orf142B7Z368 130 aa8.65□□□□□ -1.02
VPS50-207ENST00000458530 J3QL48 77 aa8.65□□□□□ -1.02
VPS50-207ENST00000458530 PSMD12O00232 456 aaPredicted RBP8.65□□□□□ -1.02
VPS50-207ENST00000458530 MANBAO00462 879 aa8.65□□□□□ -1.02
VPS50-207ENST00000458530 PPP6CO00743 305 aa8.65□□□□□ -1.02
VPS50-207ENST00000458530 RASGRP1O95267 797 aa8.65□□□□□ -1.02
VPS50-207ENST00000458530 CCNDBP1O95273 360 aa8.65□□□□□ -1.02
VPS50-207ENST00000458530 TNFP01375 233 aa8.65□□□□□ -1.02
VPS50-207ENST00000458530 JUNP05412 331 aaKnown RBP8.65□□□□□ -1.02
VPS50-207ENST00000458530 IGHV4-34P06331 123 aa8.65□□□□□ -1.02
VPS50-207ENST00000458530 LINC00032P0C843 101 aa8.65□□□□□ -1.02
VPS50-207ENST00000458530 ERGP11308 486 aa8.65□□□□□ -1.02
VPS50-207ENST00000458530 COX4I1P13073 169 aa8.65□□□□□ -1.02
VPS50-207ENST00000458530 HSD3B1P14060 373 aa8.65□□□□□ -1.02
VPS50-207ENST00000458530 JUPP14923 745 aa8.65□□□□□ -1.02
VPS50-207ENST00000458530 NQO1P15559 274 aaKnown RBP8.65□□□□□ -1.02
VPS50-207ENST00000458530 ITPKAP23677 461 aa8.65□□□□□ -1.02
VPS50-207ENST00000458530 HSD3B2P26439 372 aa8.65□□□□□ -1.02
VPS50-207ENST00000458530 PIK3R1P27986 724 aa8.65□□□□□ -1.02
VPS50-207ENST00000458530 MAPK1P28482 360 aa8.65□□□□□ -1.02
VPS50-207ENST00000458530 PRDX3P30048 256 aaKnown RBP8.65□□□□□ -1.02
VPS50-207ENST00000458530 GDF5P43026 501 aa8.65□□□□□ -1.02
VPS50-207ENST00000458530 MRPL19P49406 292 aaKnown RBP8.65□□□□□ -1.02
VPS50-207ENST00000458530 ACADVLP49748 655 aa8.65□□□□□ -1.02
VPS50-207ENST00000458530 FOXA1P55317 472 aa8.65□□□□□ -1.02
VPS50-207ENST00000458530 CLDN2P57739 230 aa8.65□□□□□ -1.02
VPS50-207ENST00000458530 SRP54P61011 504 aaKnown RBP8.65□□□□□ -1.02
VPS50-207ENST00000458530 TBPL1P62380 186 aa8.65□□□□□ -1.02
VPS50-207ENST00000458530 ILF3Q12906 894 aaKnown RBP eCLIP8.65□□□□□ -1.02
VPS50-207ENST00000458530 CSTF3Q12996 717 aaKnown RBP8.65□□□□□ -1.02
VPS50-207ENST00000458530 STX5Q13190 355 aa8.65□□□□□ -1.02
VPS50-207ENST00000458530 CHIT1Q13231 466 aa8.65□□□□□ -1.02
VPS50-207ENST00000458530 CYLC2Q14093 348 aaPredicted RBP8.65□□□□□ -1.02
VPS50-207ENST00000458530 FASTKQ14296 549 aaKnown RBP8.65□□□□□ -1.02
VPS50-207ENST00000458530 NAA25Q14CX7 972 aa8.65□□□□□ -1.02
VPS50-207ENST00000458530 CYP2A13Q16696 494 aa8.65□□□□□ -1.02
VPS50-207ENST00000458530 UAP1L1Q3KQV9 507 aa8.65□□□□□ -1.02
VPS50-207ENST00000458530 USP39Q53GS9 565 aaKnown RBP8.65□□□□□ -1.02
VPS50-207ENST00000458530 XKR6Q5GH73 641 aa8.65□□□□□ -1.02
VPS50-207ENST00000458530 PRAMEF14Q5SWL7 426 aa8.65□□□□□ -1.02
VPS50-207ENST00000458530 THEMIS2Q5TEJ8 643 aa8.65□□□□□ -1.02
VPS50-207ENST00000458530 PRAMEF13Q5VWM6 474 aa8.65□□□□□ -1.02
VPS50-207ENST00000458530 PMS2CLQ68D20 193 aa8.65□□□□□ -1.02
VPS50-207ENST00000458530 CAPRIN2Q6IMN6 1127 aaKnown RBP8.65□□□□□ -1.02
VPS50-207ENST00000458530 GRHL2Q6ISB3 625 aa8.65□□□□□ -1.02
VPS50-207ENST00000458530 LCTLQ6UWM7 567 aa8.65□□□□□ -1.02
VPS50-207ENST00000458530 C16orf89Q6UX73 402 aa8.65□□□□□ -1.02
VPS50-207ENST00000458530 ASRGL1Q7L266 308 aa8.65□□□□□ -1.02
VPS50-207ENST00000458530 AVL9Q8NBF6 648 aa8.65□□□□□ -1.02
VPS50-207ENST00000458530 ZNF480Q8WV37 535 aa8.65□□□□□ -1.02
VPS50-207ENST00000458530 SELENOMQ8WWX9 145 aa8.65□□□□□ -1.02
VPS50-207ENST00000458530 SMPDL3AQ92484 453 aa8.65□□□□□ -1.02
VPS50-207ENST00000458530 USP7Q93009 1102 aa8.65□□□□□ -1.02
VPS50-207ENST00000458530 METTL2AQ96IZ6 378 aaKnown RBP8.65□□□□□ -1.02
VPS50-207ENST00000458530 CDK15Q96Q40 435 aa8.65□□□□□ -1.02
VPS50-207ENST00000458530 BTBD10Q9BSF8 475 aa8.65□□□□□ -1.02
VPS50-207ENST00000458530 SLC25A23Q9BV35 468 aa8.65□□□□□ -1.02
VPS50-207ENST00000458530 SGPP1Q9BX95 441 aa8.65□□□□□ -1.02
VPS50-207ENST00000458530 GSDMCQ9BYG8 508 aa8.65□□□□□ -1.02
VPS50-207ENST00000458530 ZNF385DQ9H6B1 395 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms