RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 CLMPQ9H6B4 373 aa13.22□□□□□ -0.29
CLK3-203ENST00000454830 SLC23A2Q9UGH3 650 aa13.22□□□□□ -0.29
CLK3-203ENST00000454830 ADGRE2Q9UHX3 823 aa13.22□□□□□ -0.29
CLK3-203ENST00000454830 GPSM3Q9Y4H4 160 aa13.22□□□□□ -0.29
CLK3-203ENST00000454830 PCYT1BQ9Y5K3 369 aaPredicted RBP13.22□□□□□ -0.29
CLK3-203ENST00000454830 ST14Q9Y5Y6 855 aa13.22□□□□□ -0.29
CLK3-203ENST00000454830 DOCK8Q8NF50 2099 aa13.22□□□□□ -0.29
CLK3-203ENST00000454830 ARNTLO00327 626 aa13.21□□□□□ -0.29
CLK3-203ENST00000454830 ANXA6P08133 673 aa13.21□□□□□ -0.29
CLK3-203ENST00000454830 DRD3P35462 400 aa13.21□□□□□ -0.29
CLK3-203ENST00000454830 MAP7Q14244 749 aa13.21□□□□□ -0.29
CLK3-203ENST00000454830 GGTA1PQ4G0N0 100 aa13.21□□□□□ -0.29
CLK3-203ENST00000454830 IER5LQ5T953 404 aa13.21□□□□□ -0.29
CLK3-203ENST00000454830 ERMP1Q7Z2K6 904 aa13.21□□□□□ -0.29
CLK3-203ENST00000454830 DPP10Q8N608 796 aa13.21□□□□□ -0.29
CLK3-203ENST00000454830 CYGBQ8WWM9 190 aa13.21□□□□□ -0.29
CLK3-203ENST00000454830 RAD51AP1Q96B01 352 aa13.21□□□□□ -0.29
CLK3-203ENST00000454830 RIPOR3Q96MK2 946 aa13.21□□□□□ -0.29
CLK3-203ENST00000454830 BTBD9Q96Q07 612 aa13.21□□□□□ -0.29
CLK3-203ENST00000454830 MAGEL2Q9UJ55 1249 aa13.21□□□□□ -0.29
CLK3-203ENST00000454830 PCDHB14Q9Y5E9 798 aa13.21□□□□□ -0.29
CLK3-203ENST00000454830 KCNE1BA0A087WTH5 132 aa13.21□□□□□ -0.29
CLK3-203ENST00000454830 CCDC160A6NGH7 325 aa13.21□□□□□ -0.29
CLK3-203ENST00000454830 VEGFDO43915 354 aa13.21□□□□□ -0.29
CLK3-203ENST00000454830 LDLRP01130 860 aa13.21□□□□□ -0.29
CLK3-203ENST00000454830 VASPP50552 380 aaPredicted RBP13.21□□□□□ -0.29
CLK3-203ENST00000454830 GK3PQ14409 553 aa13.21□□□□□ -0.29
CLK3-203ENST00000454830 LRRC23Q53EV4 343 aaPredicted RBP13.21□□□□□ -0.29
CLK3-203ENST00000454830 KIAA1211LQ6NV74 962 aa13.21□□□□□ -0.29
CLK3-203ENST00000454830 KIAA1324Q6UXG2 1013 aaKnown RBP13.21□□□□□ -0.29
CLK3-203ENST00000454830 MYCBPQ99417 103 aaPredicted RBP13.21□□□□□ -0.29
CLK3-203ENST00000454830 IKZF5Q9H5V7 419 aa13.21□□□□□ -0.29
CLK3-203ENST00000454830 HCN2Q9UL51 889 aa13.21□□□□□ -0.29
CLK3-203ENST00000454830 MYOCOSA0A1B0GUC4 107 aa13.21□□□□□ -0.3
CLK3-203ENST00000454830 SMNDC1O75940 238 aaKnown RBP eCLIP13.21□□□□□ -0.36e-7■■□□□ 13.7
CLK3-203ENST00000454830 PRKCQQ04759 706 aa13.21□□□□□ -0.3
CLK3-203ENST00000454830 KIAA0040Q15053 153 aa13.21□□□□□ -0.3
CLK3-203ENST00000454830 PAGE2BQ5JRK9 111 aa13.21□□□□□ -0.3
CLK3-203ENST00000454830 RNF220Q5VTB9 566 aa13.21□□□□□ -0.3
CLK3-203ENST00000454830 ZNF776Q68DI1 518 aaPredicted RBP13.21□□□□□ -0.3
CLK3-203ENST00000454830 HMBOX1Q6NT76 420 aa13.21□□□□□ -0.3
CLK3-203ENST00000454830 ZNF765Q7L2R6 523 aa13.21□□□□□ -0.3
CLK3-203ENST00000454830 ADGRG5Q8IZF4 528 aa13.21□□□□□ -0.3
CLK3-203ENST00000454830 FERD3LQ96RJ6 166 aa13.21□□□□□ -0.3
CLK3-203ENST00000454830 CHID1Q9BWS9 393 aa13.21□□□□□ -0.3
CLK3-203ENST00000454830 HDAC8Q9BY41 377 aa13.21□□□□□ -0.3
CLK3-203ENST00000454830 MKRN2Q9H000 416 aaKnown RBP13.21□□□□□ -0.3
CLK3-203ENST00000454830 PHPT1Q9NRX4 125 aaPredicted RBP13.21□□□□□ -0.3
CLK3-203ENST00000454830 OAZ3Q9UMX2 235 aa13.21□□□□□ -0.3
CLK3-203ENST00000454830 RUVBL1Q9Y265 456 aaKnown RBP13.21□□□□□ -0.3
CLK3-203ENST00000454830 A0A1W2PQU0 124 aa13.2□□□□□ -0.3
CLK3-203ENST00000454830 ELOVL7A1L3X0 281 aa13.2□□□□□ -0.3
CLK3-203ENST00000454830 FPGTO14772 594 aa13.2□□□□□ -0.3
CLK3-203ENST00000454830 PGM3O95394 542 aa13.2□□□□□ -0.3
CLK3-203ENST00000454830 NPPAP01160 153 aa13.2□□□□□ -0.3
CLK3-203ENST00000454830 GPIP06744 558 aa13.2□□□□□ -0.3
CLK3-203ENST00000454830 HOXB2P14652 356 aa13.2□□□□□ -0.3
CLK3-203ENST00000454830 MAPK9P45984 424 aa13.2□□□□□ -0.3
CLK3-203ENST00000454830 PNLIPRP1P54315 467 aa13.2□□□□□ -0.3
CLK3-203ENST00000454830 PROSER1Q86XN7 944 aa13.2□□□□□ -0.3
CLK3-203ENST00000454830 ZNF740Q8NDX6 193 aa13.2□□□□□ -0.3
CLK3-203ENST00000454830 TRPV3Q8NET8 790 aa13.2□□□□□ -0.3
CLK3-203ENST00000454830 OR2L2Q8NH16 312 aa13.2□□□□□ -0.3
CLK3-203ENST00000454830 NELL1Q92832 810 aa13.2□□□□□ -0.3
CLK3-203ENST00000454830 GATA6Q92908 595 aa13.2□□□□□ -0.3
CLK3-203ENST00000454830 MAGEB10Q96LZ2 347 aaPredicted RBP13.2□□□□□ -0.3
CLK3-203ENST00000454830 TRPV4Q9HBA0 871 aa13.2□□□□□ -0.3
CLK3-203ENST00000454830 TAC3Q9UHF0 121 aa13.2□□□□□ -0.3
CLK3-203ENST00000454830 PPT2Q9UMR5 302 aa13.2□□□□□ -0.3
CLK3-203ENST00000454830 SH2B3Q9UQQ2 575 aa13.2□□□□□ -0.3
CLK3-203ENST00000454830 ZNF682O95780 498 aa13.2□□□□□ -0.3
CLK3-203ENST00000454830 CDH1P12830 882 aa13.2□□□□□ -0.3
CLK3-203ENST00000454830 CHN2P52757 468 aa13.2□□□□□ -0.3
CLK3-203ENST00000454830 CASP9P55211 416 aa13.2□□□□□ -0.3
CLK3-203ENST00000454830 DPTQ07507 201 aa13.2□□□□□ -0.3
CLK3-203ENST00000454830 PON2Q15165 354 aa13.2□□□□□ -0.3
CLK3-203ENST00000454830 BCL7AQ4VC05 210 aa13.2□□□□□ -0.3
CLK3-203ENST00000454830 FAM98BQ52LJ0 330 aaKnown RBP13.2□□□□□ -0.3
CLK3-203ENST00000454830 GRHL2Q6ISB3 625 aa13.2□□□□□ -0.3
CLK3-203ENST00000454830 NLRP8Q86W28 1048 aa13.2□□□□□ -0.3
CLK3-203ENST00000454830 FLCNQ8NFG4 579 aa13.2□□□□□ -0.3
CLK3-203ENST00000454830 MAGEE2Q8TD90 523 aaPredicted RBP13.2□□□□□ -0.3
CLK3-203ENST00000454830 ITM2CQ9NQX7 267 aa13.2□□□□□ -0.3
CLK3-203ENST00000454830 SLC6A13Q9NSD5 602 aa13.2□□□□□ -0.3
CLK3-203ENST00000454830 ETHE1O95571 254 aa13.2□□□□□ -0.3
CLK3-203ENST00000454830 HTR1EP28566 365 aa13.2□□□□□ -0.3
CLK3-203ENST00000454830 PEX19P40855 299 aa13.2□□□□□ -0.3
CLK3-203ENST00000454830 CDKN2CP42773 168 aa13.2□□□□□ -0.3
CLK3-203ENST00000454830 HSPA13P48723 471 aa13.2□□□□□ -0.3
CLK3-203ENST00000454830 PHC1P78364 1004 aa13.2□□□□□ -0.3
CLK3-203ENST00000454830 PPP1R8Q12972 351 aaKnown RBP13.2□□□□□ -0.3
CLK3-203ENST00000454830 IRF4Q15306 451 aa13.2□□□□□ -0.3
CLK3-203ENST00000454830 PRAMEF14Q5SWL7 426 aa13.2□□□□□ -0.3
CLK3-203ENST00000454830 AGBL4Q5VU57 503 aa13.2□□□□□ -0.3
CLK3-203ENST00000454830 PRAMEF13Q5VWM6 474 aa13.2□□□□□ -0.3
CLK3-203ENST00000454830 ZCCHC8Q6NZY4 707 aaKnown RBP13.2□□□□□ -0.3
CLK3-203ENST00000454830 OR56A3Q8NH54 315 aa13.2□□□□□ -0.3
CLK3-203ENST00000454830 MIEF2Q96C03 454 aa13.2□□□□□ -0.3
CLK3-203ENST00000454830 REPS1Q96D71 796 aa13.2□□□□□ -0.3
CLK3-203ENST00000454830 C12orf66Q96MD2 445 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms