RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 PRAMEP78395 509 aa5.69□□□□□ -1.5
HLA-DPA3-207ENST00000454398 OCA2Q04671 838 aa5.69□□□□□ -1.5
HLA-DPA3-207ENST00000454398 DSG2Q14126 1118 aa5.69□□□□□ -1.5
HLA-DPA3-207ENST00000454398 TCEAL1Q15170 157 aa5.69□□□□□ -1.5
HLA-DPA3-207ENST00000454398 TMED2Q15363 201 aa5.69□□□□□ -1.5
HLA-DPA3-207ENST00000454398 MINDY4Q4G0A6 757 aa5.69□□□□□ -1.5
HLA-DPA3-207ENST00000454398 DNAJC21Q5F1R6 531 aaKnown RBP5.69□□□□□ -1.5
HLA-DPA3-207ENST00000454398 TSTD2Q5T7W7 516 aa5.69□□□□□ -1.5
HLA-DPA3-207ENST00000454398 PTRHD1Q6GMV3 140 aaKnown RBP5.69□□□□□ -1.5
HLA-DPA3-207ENST00000454398 TMEM207Q6UWW9 146 aa5.69□□□□□ -1.5
HLA-DPA3-207ENST00000454398 PPP1R21Q6ZMI0 780 aa5.69□□□□□ -1.5
HLA-DPA3-207ENST00000454398 ADCK2Q7Z695 626 aa5.69□□□□□ -1.5
HLA-DPA3-207ENST00000454398 CDH24Q86UP0 819 aa5.69□□□□□ -1.5
HLA-DPA3-207ENST00000454398 CNGA4Q8IV77 575 aa5.69□□□□□ -1.5
HLA-DPA3-207ENST00000454398 SLC34A3Q8N130 599 aa5.69□□□□□ -1.5
HLA-DPA3-207ENST00000454398 LRRC57Q8N9N7 239 aa5.69□□□□□ -1.5
HLA-DPA3-207ENST00000454398 OR9A4Q8NGU2 314 aa5.69□□□□□ -1.5
HLA-DPA3-207ENST00000454398 ZCCHC10Q8TBK6 192 aa5.69□□□□□ -1.5
HLA-DPA3-207ENST00000454398 STYXQ8WUJ0 223 aa5.69□□□□□ -1.5
HLA-DPA3-207ENST00000454398 NRGNQ92686 78 aa5.69□□□□□ -1.5
HLA-DPA3-207ENST00000454398 MMABQ96EY8 250 aaPredicted RBP5.69□□□□□ -1.5
HLA-DPA3-207ENST00000454398 MAGED4Q96JG8 741 aa5.69□□□□□ -1.5
HLA-DPA3-207ENST00000454398 SIGLEC12Q96PQ1 595 aa5.69□□□□□ -1.5
HLA-DPA3-207ENST00000454398 DESI2Q9BSY9 194 aa5.69□□□□□ -1.5
HLA-DPA3-207ENST00000454398 DPH7Q9BTV6 452 aa5.69□□□□□ -1.5
HLA-DPA3-207ENST00000454398 CHRNA10Q9GZZ6 450 aa5.69□□□□□ -1.5
HLA-DPA3-207ENST00000454398 ZNF304Q9HCX3 659 aa5.69□□□□□ -1.5
HLA-DPA3-207ENST00000454398 CATSPERZQ9NTU4 200 aa5.69□□□□□ -1.5
HLA-DPA3-207ENST00000454398 GALPQ9UBC7 116 aa5.69□□□□□ -1.5
HLA-DPA3-207ENST00000454398 SUCOQ9UBS9 1254 aaKnown RBP5.69□□□□□ -1.5
HLA-DPA3-207ENST00000454398 TAC3Q9UHF0 121 aa5.69□□□□□ -1.5
HLA-DPA3-207ENST00000454398 PCYOX1Q9UHG3 505 aa5.69□□□□□ -1.5
HLA-DPA3-207ENST00000454398 INTUQ9ULD6 942 aa5.69□□□□□ -1.5
HLA-DPA3-207ENST00000454398 MKL2Q9ULH7 1088 aa5.69□□□□□ -1.5
HLA-DPA3-207ENST00000454398 SH2B3Q9UQQ2 575 aa5.69□□□□□ -1.5
HLA-DPA3-207ENST00000454398 TCAF1Q9Y4C2 921 aa5.69□□□□□ -1.5
HLA-DPA3-207ENST00000454398 PCDHA3Q9Y5H8 950 aa5.69□□□□□ -1.5
HLA-DPA3-207ENST00000454398 PRRC2AP48634 2157 aaKnown RBP5.68□□□□□ -1.5
HLA-DPA3-207ENST00000454398 OR2A25A4D2G3 310 aa5.68□□□□□ -1.5
HLA-DPA3-207ENST00000454398 OR5H15A6NDH6 313 aa5.68□□□□□ -1.5
HLA-DPA3-207ENST00000454398 NPIPA5E9PKD4 350 aa5.68□□□□□ -1.5
HLA-DPA3-207ENST00000454398 HAT1O14929 419 aa5.68□□□□□ -1.5
HLA-DPA3-207ENST00000454398 FOXS1O43638 330 aa5.68□□□□□ -1.5
HLA-DPA3-207ENST00000454398 PRICKLE3O43900 615 aaPredicted RBP5.68□□□□□ -1.5
HLA-DPA3-207ENST00000454398 PRAMEF2O60811 474 aa5.68□□□□□ -1.5
HLA-DPA3-207ENST00000454398 GPC4O75487 556 aa5.68□□□□□ -1.5
HLA-DPA3-207ENST00000454398 RASAL1O95294 804 aa5.68□□□□□ -1.5
HLA-DPA3-207ENST00000454398 ALBP02768 609 aa5.68□□□□□ -1.5
HLA-DPA3-207ENST00000454398 RPN2P04844 631 aa5.68□□□□□ -1.5
HLA-DPA3-207ENST00000454398 SERPINA7P05543 415 aa5.68□□□□□ -1.5
HLA-DPA3-207ENST00000454398 HEXBP07686 556 aa5.68□□□□□ -1.5
HLA-DPA3-207ENST00000454398 APRTP07741 180 aa5.68□□□□□ -1.5
HLA-DPA3-207ENST00000454398 IL1RNP18510 177 aa5.68□□□□□ -1.5
HLA-DPA3-207ENST00000454398 ARNTP27540 789 aa5.68□□□□□ -1.5
HLA-DPA3-207ENST00000454398 NMBRP28336 390 aa5.68□□□□□ -1.5
HLA-DPA3-207ENST00000454398 KIR3DL1P43629 444 aa5.68□□□□□ -1.5
HLA-DPA3-207ENST00000454398 NR0B1P51843 470 aaKnown RBP5.68□□□□□ -1.5
HLA-DPA3-207ENST00000454398 EMP2P54851 167 aa5.68□□□□□ -1.5
HLA-DPA3-207ENST00000454398 RWDD2BP57060 319 aa5.68□□□□□ -1.5
HLA-DPA3-207ENST00000454398 TBX2Q13207 712 aaPredicted RBP5.68□□□□□ -1.5
HLA-DPA3-207ENST00000454398 KLF1Q13351 362 aaPredicted RBP5.68□□□□□ -1.5
HLA-DPA3-207ENST00000454398 ART3Q13508 389 aa5.68□□□□□ -1.5
HLA-DPA3-207ENST00000454398 SNX1Q13596 522 aa5.68□□□□□ -1.5
HLA-DPA3-207ENST00000454398 CUL1Q13616 776 aa5.68□□□□□ -1.5
HLA-DPA3-207ENST00000454398 KCNJ11Q14654 390 aa5.68□□□□□ -1.5
HLA-DPA3-207ENST00000454398 SPA17Q15506 151 aa5.68□□□□□ -1.5
HLA-DPA3-207ENST00000454398 TESK1Q15569 626 aa5.68□□□□□ -1.5
HLA-DPA3-207ENST00000454398 ZNF630Q2M218 657 aaPredicted RBP5.68□□□□□ -1.5
HLA-DPA3-207ENST00000454398 PARP6Q2NL67 630 aa5.68□□□□□ -1.5
HLA-DPA3-207ENST00000454398 MUM1Q2TAK8 710 aa5.68□□□□□ -1.5
HLA-DPA3-207ENST00000454398 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.68□□□□□ -1.5
HLA-DPA3-207ENST00000454398 PRTGQ2VWP7 1150 aa5.68□□□□□ -1.5
HLA-DPA3-207ENST00000454398 BTBD16Q32M84 506 aa5.68□□□□□ -1.5
HLA-DPA3-207ENST00000454398 P3H1Q32P28 736 aa5.68□□□□□ -1.5
HLA-DPA3-207ENST00000454398 FASTKD1Q53R41 847 aaKnown RBP5.68□□□□□ -1.5
HLA-DPA3-207ENST00000454398 ZNF766Q5HY98 468 aa5.68□□□□□ -1.5
HLA-DPA3-207ENST00000454398 ZC3H12BQ5HYM0 836 aaKnown RBP5.68□□□□□ -1.5
HLA-DPA3-207ENST00000454398 TCTE1Q5JU00 501 aa5.68□□□□□ -1.5
HLA-DPA3-207ENST00000454398 ABHD17BQ5VST6 288 aa5.68□□□□□ -1.5
HLA-DPA3-207ENST00000454398 ATG9BQ674R7 924 aa5.68□□□□□ -1.5
HLA-DPA3-207ENST00000454398 UNC5DQ6UXZ4 953 aa5.68□□□□□ -1.5
HLA-DPA3-207ENST00000454398 RAD9BQ6WBX8 426 aa5.68□□□□□ -1.5
HLA-DPA3-207ENST00000454398 MBOAT1Q6ZNC8 495 aa5.68□□□□□ -1.5
HLA-DPA3-207ENST00000454398 NDUFAF7Q7L592 441 aa5.68□□□□□ -1.5
HLA-DPA3-207ENST00000454398 KIF2BQ8N4N8 673 aa5.68□□□□□ -1.5
HLA-DPA3-207ENST00000454398 ARHGEF39Q8N4T4 335 aa5.68□□□□□ -1.5
HLA-DPA3-207ENST00000454398 ZNF808Q8N4W9 903 aaPredicted RBP5.68□□□□□ -1.5
HLA-DPA3-207ENST00000454398 OR2A1Q8NGT9 310 aa5.68□□□□□ -1.5
HLA-DPA3-207ENST00000454398 OR4L1Q8NH43 312 aa5.68□□□□□ -1.5
HLA-DPA3-207ENST00000454398 GIMAP7Q8NHV1 300 aa5.68□□□□□ -1.5
HLA-DPA3-207ENST00000454398 SLC35B2Q8TB61 432 aa5.68□□□□□ -1.5
HLA-DPA3-207ENST00000454398 C1orf54Q8WWF1 131 aa5.68□□□□□ -1.5
HLA-DPA3-207ENST00000454398 ASZ1Q8WWH4 475 aa5.68□□□□□ -1.5
HLA-DPA3-207ENST00000454398 TSLPQ969D9 159 aa5.68□□□□□ -1.5
HLA-DPA3-207ENST00000454398 RELTQ969Z4 430 aa5.68□□□□□ -1.5
HLA-DPA3-207ENST00000454398 CCDC138Q96M89 665 aa5.68□□□□□ -1.5
HLA-DPA3-207ENST00000454398 SLC30A3Q99726 388 aa5.68□□□□□ -1.5
HLA-DPA3-207ENST00000454398 NPAS2Q99743 824 aa5.68□□□□□ -1.5
HLA-DPA3-207ENST00000454398 ZFYVE21Q9BQ24 234 aa5.68□□□□□ -1.5
HLA-DPA3-207ENST00000454398 FERMT1Q9BQL6 677 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms