RNA–Protein interactions for RNA: ENST00000453580.1

TNFRSF4-202, Transcript of TNF receptor superfamily member 4, humanhuman

TSL 3

Gene TNFRSF4, Length 393 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-202ENST00000453580 CORO1CQ9ULV4 474 aaPredicted RBP16.32■□□□□ 0.2
TNFRSF4-202ENST00000453580 PLAAQ9Y263 795 aa16.32■□□□□ 0.2
TNFRSF4-202ENST00000453580 E7ENX8 843 aa16.31■□□□□ 0.2
TNFRSF4-202ENST00000453580 SLC16A5O15375 505 aa16.31■□□□□ 0.2
TNFRSF4-202ENST00000453580 SORBS2O94875 1100 aaKnown RBP16.31■□□□□ 0.2
TNFRSF4-202ENST00000453580 HAUS5O94927 633 aa16.31■□□□□ 0.2
TNFRSF4-202ENST00000453580 CTSBP07858 339 aa16.31■□□□□ 0.2
TNFRSF4-202ENST00000453580 HIST1H2AGP0C0S8 130 aaPredicted RBP16.31■□□□□ 0.2
TNFRSF4-202ENST00000453580 HIST1H2ADP20671 130 aa16.31■□□□□ 0.2
TNFRSF4-202ENST00000453580 FBLP22087 321 aaKnown RBP16.31■□□□□ 0.2
TNFRSF4-202ENST00000453580 MCM3P25205 808 aa16.31■□□□□ 0.2
TNFRSF4-202ENST00000453580 ITGA3P26006 1051 aa16.31■□□□□ 0.2
TNFRSF4-202ENST00000453580 PAFAH1B1P43034 410 aa16.31■□□□□ 0.2
TNFRSF4-202ENST00000453580 TAP2Q03519 686 aa16.31■□□□□ 0.2
TNFRSF4-202ENST00000453580 FASTKQ14296 549 aaKnown RBP16.31■□□□□ 0.2
TNFRSF4-202ENST00000453580 TUBB8Q3ZCM7 444 aa16.31■□□□□ 0.2
TNFRSF4-202ENST00000453580 PRAMEF13Q5VWM6 474 aa16.31■□□□□ 0.2
TNFRSF4-202ENST00000453580 FRMPD2BQ6IN97 320 aa16.31■□□□□ 0.2
TNFRSF4-202ENST00000453580 SUSD1Q6UWL2 747 aa16.31■□□□□ 0.2
TNFRSF4-202ENST00000453580 IQCKQ8N0W5 287 aa16.31■□□□□ 0.2
TNFRSF4-202ENST00000453580 MYO1HQ8N1T3 1032 aa16.31■□□□□ 0.2
TNFRSF4-202ENST00000453580 C2CD4AQ8NCU7 369 aaPredicted RBP16.31■□□□□ 0.2
TNFRSF4-202ENST00000453580 CD200R1Q8TD46 325 aa16.31■□□□□ 0.2
TNFRSF4-202ENST00000453580 ZNF480Q8WV37 535 aa16.31■□□□□ 0.2
TNFRSF4-202ENST00000453580 HIST1H2AHQ96KK5 128 aa16.31■□□□□ 0.2
TNFRSF4-202ENST00000453580 CCDC138Q96M89 665 aa16.31■□□□□ 0.2
TNFRSF4-202ENST00000453580 SPSB2Q99619 263 aa16.31■□□□□ 0.2
TNFRSF4-202ENST00000453580 HIST1H2AJQ99878 128 aa16.31■□□□□ 0.2
TNFRSF4-202ENST00000453580 H2AFJQ9BTM1 129 aa16.31■□□□□ 0.2
TNFRSF4-202ENST00000453580 DDX47Q9H0S4 455 aaKnown RBP16.31■□□□□ 0.2
TNFRSF4-202ENST00000453580 SLC22A11Q9NSA0 550 aa16.31■□□□□ 0.2
TNFRSF4-202ENST00000453580 C14orf105Q9NVL8 296 aa16.31■□□□□ 0.2
TNFRSF4-202ENST00000453580 RNF14Q9UBS8 474 aa16.31■□□□□ 0.2
TNFRSF4-202ENST00000453580 B3GNT3Q9Y2A9 372 aa16.31■□□□□ 0.2
TNFRSF4-202ENST00000453580 MAP4K5Q9Y4K4 846 aa16.31■□□□□ 0.2
TNFRSF4-202ENST00000453580 NBASA2RRP1 2371 aa16.3■□□□□ 0.2
TNFRSF4-202ENST00000453580 ASH1LQ9NR48 2969 aaKnown RBP16.3■□□□□ 0.2
TNFRSF4-202ENST00000453580 LOC105369274A0A096LPK9 316 aa16.3■□□□□ 0.2
TNFRSF4-202ENST00000453580 LOC102723532A0A0G2JNH3 316 aa16.3■□□□□ 0.2
TNFRSF4-202ENST00000453580 VSTM2BA6NLU5 285 aa16.3■□□□□ 0.2
TNFRSF4-202ENST00000453580 H0YGG7 62 aa16.3■□□□□ 0.2
TNFRSF4-202ENST00000453580 CCDC188H7C350 402 aa16.3■□□□□ 0.2
TNFRSF4-202ENST00000453580 CNOT3O75175 753 aaKnown RBP16.3■□□□□ 0.2
TNFRSF4-202ENST00000453580 ANXA5P08758 320 aa16.3■□□□□ 0.2
TNFRSF4-202ENST00000453580 ATXN8OSP0DMR3 200 aa16.3■□□□□ 0.2
TNFRSF4-202ENST00000453580 CXCR2P25025 360 aa16.3■□□□□ 0.2
TNFRSF4-202ENST00000453580 OR1D4P47884 311 aa16.3■□□□□ 0.2
TNFRSF4-202ENST00000453580 ARF3P61204 181 aaPredicted RBP16.3■□□□□ 0.2
TNFRSF4-202ENST00000453580 AP2B1P63010 937 aa16.3■□□□□ 0.2
TNFRSF4-202ENST00000453580 CUL1Q13616 776 aa16.3■□□□□ 0.2
TNFRSF4-202ENST00000453580 COLEC12Q5KU26 742 aa16.3■□□□□ 0.2
TNFRSF4-202ENST00000453580 FBXO42Q6P3S6 717 aa16.3■□□□□ 0.2
TNFRSF4-202ENST00000453580 ZNF549Q6P9A3 640 aa16.3■□□□□ 0.2
TNFRSF4-202ENST00000453580 ADCK2Q7Z695 626 aa16.3■□□□□ 0.2
TNFRSF4-202ENST00000453580 PAQR7Q86WK9 346 aa16.3■□□□□ 0.2
TNFRSF4-202ENST00000453580 CNTN4Q8IWV2 1026 aa16.3■□□□□ 0.2
TNFRSF4-202ENST00000453580 OR4N4Q8N0Y3 316 aa16.3■□□□□ 0.2
TNFRSF4-202ENST00000453580 CSNK1A1LQ8N752 337 aa16.3■□□□□ 0.2
TNFRSF4-202ENST00000453580 THAP11Q96EK4 314 aa16.3■□□□□ 0.2
TNFRSF4-202ENST00000453580 TRIM56Q9BRZ2 755 aaKnown RBP16.3■□□□□ 0.2
TNFRSF4-202ENST00000453580 CRB3Q9BUF7 120 aa16.3■□□□□ 0.2
TNFRSF4-202ENST00000453580 TRIM54Q9BYV2 358 aa16.3■□□□□ 0.2
TNFRSF4-202ENST00000453580 SLC6A20Q9NP91 592 aa16.3■□□□□ 0.2
TNFRSF4-202ENST00000453580 CCDC177Q9NQR7 707 aaPredicted RBP16.3■□□□□ 0.2
TNFRSF4-202ENST00000453580 TMEM184CQ9NVA4 438 aa16.3■□□□□ 0.2
TNFRSF4-202ENST00000453580 UBR5O95071 2799 aaPredicted RBP16.3■□□□□ 0.2
TNFRSF4-202ENST00000453580 MDC1Q14676 2089 aaKnown RBP16.3■□□□□ 0.2
TNFRSF4-202ENST00000453580 GRK3P35626 688 aa16.29■□□□□ 0.2
TNFRSF4-202ENST00000453580 DR1Q01658 176 aa16.29■□□□□ 0.2
TNFRSF4-202ENST00000453580 DHX9Q08211 1270 aaKnown RBP16.29■□□□□ 0.2
TNFRSF4-202ENST00000453580 DSG2Q14126 1118 aa16.29■□□□□ 0.2
TNFRSF4-202ENST00000453580 FAM53BQ14153 422 aa16.29■□□□□ 0.2
TNFRSF4-202ENST00000453580 INPP5JQ15735 1006 aaPredicted RBP16.29■□□□□ 0.2
TNFRSF4-202ENST00000453580 PRTGQ2VWP7 1150 aa16.29■□□□□ 0.2
TNFRSF4-202ENST00000453580 AGAP7PQ5VUJ5 663 aa16.29■□□□□ 0.2
TNFRSF4-202ENST00000453580 SLC6A19Q695T7 634 aa16.29■□□□□ 0.2
TNFRSF4-202ENST00000453580 ZNF425Q6IV72 752 aa16.29■□□□□ 0.2
TNFRSF4-202ENST00000453580 CYHR1Q6ZMK1 362 aa16.29■□□□□ 0.2
TNFRSF4-202ENST00000453580 COX15Q7KZN9 410 aa16.29■□□□□ 0.2
TNFRSF4-202ENST00000453580 CPNE9Q8IYJ1 553 aa16.29■□□□□ 0.2
TNFRSF4-202ENST00000453580 GIMAP7Q8NHV1 300 aa16.29■□□□□ 0.2
TNFRSF4-202ENST00000453580 STT3BQ8TCJ2 826 aa16.29■□□□□ 0.2
TNFRSF4-202ENST00000453580 CERS2Q96G23 380 aa16.29■□□□□ 0.2
TNFRSF4-202ENST00000453580 AGAP4Q96P64 663 aa16.29■□□□□ 0.2
TNFRSF4-202ENST00000453580 SLC30A3Q99726 388 aa16.29■□□□□ 0.2
TNFRSF4-202ENST00000453580 ILKAPQ9H0C8 392 aaPredicted RBP16.29■□□□□ 0.2
TNFRSF4-202ENST00000453580 ZNF552Q9H707 407 aaPredicted RBP16.29■□□□□ 0.2
TNFRSF4-202ENST00000453580 PARVBQ9HBI1 364 aa16.29■□□□□ 0.2
TNFRSF4-202ENST00000453580 MKKSQ9NPJ1 570 aaPredicted RBP16.29■□□□□ 0.2
TNFRSF4-202ENST00000453580 PPANQ9NQ55 473 aaKnown RBP16.29■□□□□ 0.2
TNFRSF4-202ENST00000453580 FBXL4Q9UKA2 621 aa16.29■□□□□ 0.2
TNFRSF4-202ENST00000453580 MED16Q9Y2X0 877 aa16.29■□□□□ 0.2
TNFRSF4-202ENST00000453580 SAR1BQ9Y6B6 198 aa16.29■□□□□ 0.2
TNFRSF4-202ENST00000453580 IGLV3-12A0A075B6K2 115 aa16.28■□□□□ 0.2
TNFRSF4-202ENST00000453580 CLEC18AA5D8T8 446 aa16.28■□□□□ 0.2
TNFRSF4-202ENST00000453580 MAP2K7O14733 419 aa16.28■□□□□ 0.2
TNFRSF4-202ENST00000453580 ZGLP1P0C6A0 271 aa16.28■□□□□ 0.2
TNFRSF4-202ENST00000453580 ACPPP15309 386 aa16.28■□□□□ 0.2
TNFRSF4-202ENST00000453580 FDXRP22570 491 aa16.28■□□□□ 0.2
TNFRSF4-202ENST00000453580 AVPR1BP47901 424 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms