RNA–Protein interactions for RNA: ENST00000453091.6

RIF1-206, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 8,053 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-206ENST00000453091 HAPLN1P10915 354 aaPredicted RBP7.55□□□□□ -1.2
RIF1-206ENST00000453091 NCBP2P52298 156 aaKnown RBP eCLIP7.55□□□□□ -1.22e-10■■■□□ 17.6
RIF1-206ENST00000453091 SMIM11AP58511 58 aa7.55□□□□□ -1.2
RIF1-206ENST00000453091 RPL6Q02878 288 aaKnown RBP7.55□□□□□ -1.2
RIF1-206ENST00000453091 ZNHIT3Q15649 155 aaPredicted RBP7.55□□□□□ -1.2
RIF1-206ENST00000453091 PTCHD3Q3KNS1 767 aa7.55□□□□□ -1.2
RIF1-206ENST00000453091 ANKDD1AQ495B1 522 aa7.55□□□□□ -1.2
RIF1-206ENST00000453091 C2orf27AQ580R0 203 aa7.55□□□□□ -1.2
RIF1-206ENST00000453091 OR2T5Q6IEZ7 315 aa7.55□□□□□ -1.2
RIF1-206ENST00000453091 Q6ZVU0 165 aa7.55□□□□□ -1.2
RIF1-206ENST00000453091 SHFQ7M4L6 423 aa7.55□□□□□ -1.2
RIF1-206ENST00000453091 NPAS4Q8IUM7 802 aa7.55□□□□□ -1.2
RIF1-206ENST00000453091 TIGD4Q8IY51 512 aa7.55□□□□□ -1.2
RIF1-206ENST00000453091 TRPV1Q8NER1 839 aa7.55□□□□□ -1.2
RIF1-206ENST00000453091 OR2T29Q8NH02 315 aa7.55□□□□□ -1.2
RIF1-206ENST00000453091 PYURFQ96I23 114 aa7.55□□□□□ -1.2
RIF1-206ENST00000453091 MOCS1Q9NZB8 636 aa7.55□□□□□ -1.2
RIF1-206ENST00000453091 ACTR3BQ9P1U1 418 aa7.55□□□□□ -1.2
RIF1-206ENST00000453091 STON1Q9Y6Q2 735 aa7.55□□□□□ -1.2
RIF1-206ENST00000453091 ZSCAN5BA6NJL1 495 aa7.55□□□□□ -1.2
RIF1-206ENST00000453091 ALAS2P22557 587 aa7.55□□□□□ -1.2
RIF1-206ENST00000453091 CXCR2P25025 360 aa7.55□□□□□ -1.2
RIF1-206ENST00000453091 DNAJA1P31689 397 aaKnown RBP7.55□□□□□ -1.2
RIF1-206ENST00000453091 CLCN4P51793 760 aa7.55□□□□□ -1.2
RIF1-206ENST00000453091 RPS13P62277 151 aaKnown RBP7.55□□□□□ -1.2
RIF1-206ENST00000453091 GALNT2Q10471 571 aa7.55□□□□□ -1.2
RIF1-206ENST00000453091 ABRAXAS2Q15018 415 aa7.55□□□□□ -1.2
RIF1-206ENST00000453091 ARL9Q6T311 187 aa7.55□□□□□ -1.2
RIF1-206ENST00000453091 ZNF563Q8TA94 476 aa7.55□□□□□ -1.2
RIF1-206ENST00000453091 TMEM40Q8WWA1 233 aa7.55□□□□□ -1.2
RIF1-206ENST00000453091 SLC38A4Q969I6 547 aa7.55□□□□□ -1.2
RIF1-206ENST00000453091 LHPPQ9H008 270 aa7.55□□□□□ -1.2
RIF1-206ENST00000453091 LMAN2LQ9H0V9 348 aa7.55□□□□□ -1.2
RIF1-206ENST00000453091 CCDC177Q9NQR7 707 aaPredicted RBP7.55□□□□□ -1.2
RIF1-206ENST00000453091 STOML2Q9UJZ1 356 aa7.55□□□□□ -1.2
RIF1-206ENST00000453091 PCDHGA7Q9Y5G6 932 aa7.55□□□□□ -1.2
RIF1-206ENST00000453091 BAZ2BQ9UIF8 2168 aaKnown RBP7.55□□□□□ -1.2
RIF1-206ENST00000453091 C2orf92A0A1B0GVN3 265 aa7.54□□□□□ -1.2
RIF1-206ENST00000453091 G3V2L1 256 aa7.54□□□□□ -1.2
RIF1-206ENST00000453091 MEN1O00255 615 aa7.54□□□□□ -1.2
RIF1-206ENST00000453091 NME4O00746 187 aa7.54□□□□□ -1.2
RIF1-206ENST00000453091 GUCY1B2O75343 617 aa7.54□□□□□ -1.2
RIF1-206ENST00000453091 OXTRP30559 389 aa7.54□□□□□ -1.2
RIF1-206ENST00000453091 CD97P48960 835 aa7.54□□□□□ -1.2
RIF1-206ENST00000453091 RPS26P62854 115 aaKnown RBP7.54□□□□□ -1.2
RIF1-206ENST00000453091 NIPAL4Q0D2K0 466 aa7.54□□□□□ -1.2
RIF1-206ENST00000453091 GRM2Q14416 872 aa7.54□□□□□ -1.2
RIF1-206ENST00000453091 SLC35F1Q5T1Q4 408 aa7.54□□□□□ -1.2
RIF1-206ENST00000453091 UFD1Q92890 307 aa7.54□□□□□ -1.2
RIF1-206ENST00000453091 UBE2E3Q969T4 207 aa7.54□□□□□ -1.2
RIF1-206ENST00000453091 MUC13Q9H3R2 512 aa7.54□□□□□ -1.2
RIF1-206ENST00000453091 DUS2Q9NX74 493 aaKnown RBP7.54□□□□□ -1.2
RIF1-206ENST00000453091 A0A1B0GVT2 93 aa7.54□□□□□ -1.2
RIF1-206ENST00000453091 TNFRSF10BO14763 440 aa7.54□□□□□ -1.2
RIF1-206ENST00000453091 CDH5P33151 784 aaPredicted RBP7.54□□□□□ -1.2
RIF1-206ENST00000453091 TECRLQ5HYJ1 363 aa7.54□□□□□ -1.2
RIF1-206ENST00000453091 SLC25A24Q6NUK1 477 aa7.54□□□□□ -1.2
RIF1-206ENST00000453091 TAF8Q7Z7C8 310 aa7.54□□□□□ -1.2
RIF1-206ENST00000453091 JAZF1Q86VZ6 243 aa7.54□□□□□ -1.2
RIF1-206ENST00000453091 CHERPQ8IWX8 916 aaKnown RBP7.54□□□□□ -1.2
RIF1-206ENST00000453091 KBTBD7Q8WVZ9 684 aa7.54□□□□□ -1.2
RIF1-206ENST00000453091 SPATA5L1Q9BVQ7 753 aa7.54□□□□□ -1.2
RIF1-206ENST00000453091 MAGEH1Q9H213 219 aa7.54□□□□□ -1.2
RIF1-206ENST00000453091 PCDHGA4Q9Y5G9 962 aa7.54□□□□□ -1.2
RIF1-206ENST00000453091 PCDHGA10Q9Y5H3 936 aa7.54□□□□□ -1.2
RIF1-206ENST00000453091 E7ESA3 106 aa7.54□□□□□ -1.2
RIF1-206ENST00000453091 CAPN3P20807 821 aa7.54□□□□□ -1.2
RIF1-206ENST00000453091 PPIBP23284 216 aaKnown RBP7.54□□□□□ -1.2
RIF1-206ENST00000453091 SLC37A3Q8NCC5 494 aa7.54□□□□□ -1.2
RIF1-206ENST00000453091 AIF1LQ9BQI0 150 aa7.54□□□□□ -1.2
RIF1-206ENST00000453091 MS4A12Q9NXJ0 267 aa7.54□□□□□ -1.2
RIF1-206ENST00000453091 DKK3Q9UBP4 350 aa7.54□□□□□ -1.2
RIF1-206ENST00000453091 COL1A2P08123 1366 aa7.54□□□□□ -1.2
RIF1-206ENST00000453091 STSP08842 583 aa7.54□□□□□ -1.2
RIF1-206ENST00000453091 PRPS2P11908 318 aa7.54□□□□□ -1.2
RIF1-206ENST00000453091 YBEYP58557 167 aaPredicted RBP7.54□□□□□ -1.2
RIF1-206ENST00000453091 OLR1P78380 273 aa7.54□□□□□ -1.2
RIF1-206ENST00000453091 GNA13Q14344 377 aa7.54□□□□□ -1.2
RIF1-206ENST00000453091 ZNF829Q3KNS6 432 aaPredicted RBP7.54□□□□□ -1.2
RIF1-206ENST00000453091 MSANTD2Q6P1R3 559 aa7.54□□□□□ -1.2
RIF1-206ENST00000453091 HSDL2Q6YN16 418 aa7.54□□□□□ -1.2
RIF1-206ENST00000453091 RELL1Q8IUW5 271 aa7.54□□□□□ -1.2
RIF1-206ENST00000453091 CMTM8Q8IZV2 173 aa7.54□□□□□ -1.2
RIF1-206ENST00000453091 LNX2Q8N448 690 aa7.54□□□□□ -1.2
RIF1-206ENST00000453091 MARVELD2Q8N4S9 558 aa7.54□□□□□ -1.2
RIF1-206ENST00000453091 LMNTD1Q8N9Z9 388 aa7.54□□□□□ -1.2
RIF1-206ENST00000453091 NTAN1Q96AB6 310 aa7.54□□□□□ -1.2
RIF1-206ENST00000453091 PPP1R16AQ96I34 528 aa7.54□□□□□ -1.2
RIF1-206ENST00000453091 FUNDC2Q9BWH2 189 aa7.54□□□□□ -1.2
RIF1-206ENST00000453091 GPR62Q9BZJ7 368 aa7.54□□□□□ -1.2
RIF1-206ENST00000453091 CCDC59Q9P031 241 aaKnown RBP7.54□□□□□ -1.2
RIF1-206ENST00000453091 TAC3Q9UHF0 121 aa7.54□□□□□ -1.2
RIF1-206ENST00000453091 A0A1B0GVM2 712 aa7.54□□□□□ -1.2
RIF1-206ENST00000453091 DAPL1A0PJW8 107 aa7.54□□□□□ -1.2
RIF1-206ENST00000453091 ADAMDEC1O15204 470 aa7.54□□□□□ -1.2
RIF1-206ENST00000453091 TBRG1Q3YBR2 411 aa7.54□□□□□ -1.2
RIF1-206ENST00000453091 PAGE3Q5JUK9 113 aa7.54□□□□□ -1.2
RIF1-206ENST00000453091 SLC8B1Q6J4K2 584 aa7.54□□□□□ -1.2
RIF1-206ENST00000453091 BPIFB1Q8TDL5 484 aa7.54□□□□□ -1.2
RIF1-206ENST00000453091 ZFAND2BQ8WV99 257 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms