RNA–Protein interactions for RNA: ENST00000452520.1

HMGB1P26-201, Transcript of high mobility group box 1 pseudogene 26, humanhuman

BASIC

Gene HMGB1P26, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P26-201ENST00000452520 ELMOD2Q8IZ81 293 aa4.72□□□□□ -1.65
HMGB1P26-201ENST00000452520 NAGSQ8N159 534 aa4.72□□□□□ -1.65
HMGB1P26-201ENST00000452520 KDM8Q8N371 416 aa4.72□□□□□ -1.65
HMGB1P26-201ENST00000452520 AMER3Q8N944 861 aa4.72□□□□□ -1.65
HMGB1P26-201ENST00000452520 POC1AQ8NBT0 407 aa4.72□□□□□ -1.65
HMGB1P26-201ENST00000452520 CLEC1AQ8NC01 280 aa4.72□□□□□ -1.65
HMGB1P26-201ENST00000452520 SMPDL3BQ92485 455 aa4.72□□□□□ -1.65
HMGB1P26-201ENST00000452520 N4BP2L2Q92802 583 aaPredicted RBP4.72□□□□□ -1.65
HMGB1P26-201ENST00000452520 SGF29Q96ES7 293 aa4.72□□□□□ -1.65
HMGB1P26-201ENST00000452520 LINGO1Q96FE5 620 aa4.72□□□□□ -1.65
HMGB1P26-201ENST00000452520 DTD2Q96FN9 168 aa4.72□□□□□ -1.65
HMGB1P26-201ENST00000452520 VPS39Q96JC1 886 aa4.72□□□□□ -1.65
HMGB1P26-201ENST00000452520 ZNF560Q96MR9 790 aa4.72□□□□□ -1.65
HMGB1P26-201ENST00000452520 KCNK16Q96T55 309 aa4.72□□□□□ -1.65
HMGB1P26-201ENST00000452520 PKP2Q99959 881 aa4.72□□□□□ -1.65
HMGB1P26-201ENST00000452520 LMF2Q9BU23 707 aaKnown RBP4.72□□□□□ -1.65
HMGB1P26-201ENST00000452520 POLR3CQ9BUI4 534 aaPredicted RBP4.72□□□□□ -1.65
HMGB1P26-201ENST00000452520 NYXQ9GZU5 481 aa4.72□□□□□ -1.65
HMGB1P26-201ENST00000452520 S1PR5Q9H228 398 aa4.72□□□□□ -1.65
HMGB1P26-201ENST00000452520 CDH20Q9HBT6 801 aa4.72□□□□□ -1.65
HMGB1P26-201ENST00000452520 RAB9BQ9NP90 201 aa4.72□□□□□ -1.65
HMGB1P26-201ENST00000452520 DUSP12Q9UNI6 340 aa4.72□□□□□ -1.65
HMGB1P26-201ENST00000452520 EXOC7Q9UPT5 735 aa4.72□□□□□ -1.65
HMGB1P26-201ENST00000452520 ITM2BQ9Y287 266 aa4.72□□□□□ -1.65
HMGB1P26-201ENST00000452520 NME7Q9Y5B8 376 aa4.72□□□□□ -1.65
HMGB1P26-201ENST00000452520 NEMP2A6NFY4 417 aa4.71□□□□□ -1.66
HMGB1P26-201ENST00000452520 CACNB4O00305 520 aaPredicted RBP4.71□□□□□ -1.66
HMGB1P26-201ENST00000452520 DVL1O14640 695 aa4.71□□□□□ -1.66
HMGB1P26-201ENST00000452520 FLRT2O43155 660 aa4.71□□□□□ -1.66
HMGB1P26-201ENST00000452520 LUC7L3O95232 432 aaKnown RBP4.71□□□□□ -1.66
HMGB1P26-201ENST00000452520 PTBP3O95758 552 aaKnown RBP4.71□□□□□ -1.66
HMGB1P26-201ENST00000452520 SERPING1P05155 500 aa4.71□□□□□ -1.66
HMGB1P26-201ENST00000452520 ANKRD34CP0C6C1 535 aa4.71□□□□□ -1.66
HMGB1P26-201ENST00000452520 SAGP10523 405 aaPredicted RBP4.71□□□□□ -1.66
HMGB1P26-201ENST00000452520 AHRP35869 848 aa4.71□□□□□ -1.66
HMGB1P26-201ENST00000452520 CDKN1AP38936 164 aa4.71□□□□□ -1.66
HMGB1P26-201ENST00000452520 MAGEB1P43366 347 aa4.71□□□□□ -1.66
HMGB1P26-201ENST00000452520 MLLT10P55197 1068 aa4.71□□□□□ -1.66
HMGB1P26-201ENST00000452520 GSDMDP57764 484 aa4.71□□□□□ -1.66
HMGB1P26-201ENST00000452520 KCNJ10P78508 379 aa4.71□□□□□ -1.66
HMGB1P26-201ENST00000452520 RPL24P83731 157 aaKnown RBP4.71□□□□□ -1.66
HMGB1P26-201ENST00000452520 PNRC1Q12796 327 aaPredicted RBP4.71□□□□□ -1.66
HMGB1P26-201ENST00000452520 GAMTQ14353 236 aa4.71□□□□□ -1.66
HMGB1P26-201ENST00000452520 INAQ16352 499 aa4.71□□□□□ -1.66
HMGB1P26-201ENST00000452520 CTU2Q2VPK5 515 aaKnown RBP4.71□□□□□ -1.66
HMGB1P26-201ENST00000452520 LACTB2Q53H82 288 aaPredicted RBP4.71□□□□□ -1.66
HMGB1P26-201ENST00000452520 RBM43Q6ZSC3 357 aaKnown RBP4.71□□□□□ -1.66
HMGB1P26-201ENST00000452520 OR5M8Q8NGP6 311 aa4.71□□□□□ -1.66
HMGB1P26-201ENST00000452520 EXOC6Q8TAG9 804 aa4.71□□□□□ -1.66
HMGB1P26-201ENST00000452520 CCDC110Q8TBZ0 833 aa4.71□□□□□ -1.66
HMGB1P26-201ENST00000452520 SECTM1Q8WVN6 248 aa4.71□□□□□ -1.66
HMGB1P26-201ENST00000452520 UBLCP1Q8WVY7 318 aaPredicted RBP4.71□□□□□ -1.66
HMGB1P26-201ENST00000452520 SEMA4DQ92854 862 aa4.71□□□□□ -1.66
HMGB1P26-201ENST00000452520 OXNAD1Q96HP4 312 aaPredicted RBP4.71□□□□□ -1.66
HMGB1P26-201ENST00000452520 ABHD8Q96I13 439 aa4.71□□□□□ -1.66
HMGB1P26-201ENST00000452520 EPSTI1Q96J88 318 aa4.71□□□□□ -1.66
HMGB1P26-201ENST00000452520 SAMD8Q96LT4 415 aa4.71□□□□□ -1.66
HMGB1P26-201ENST00000452520 LRRC1Q9BTT6 524 aa4.71□□□□□ -1.66
HMGB1P26-201ENST00000452520 DPH5Q9H2P9 285 aa4.71□□□□□ -1.66
HMGB1P26-201ENST00000452520 TRPC7Q9HCX4 862 aa4.71□□□□□ -1.66
HMGB1P26-201ENST00000452520 POLE3Q9NRF9 147 aa4.71□□□□□ -1.66
HMGB1P26-201ENST00000452520 NPAP1Q9NZP6 1156 aa4.71□□□□□ -1.66
HMGB1P26-201ENST00000452520 MAD2L2Q9UI95 211 aa4.71□□□□□ -1.66
HMGB1P26-201ENST00000452520 RRP15Q9Y3B9 282 aaKnown RBP4.71□□□□□ -1.66
HMGB1P26-201ENST00000452520 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.71□□□□□ -1.66
HMGB1P26-201ENST00000452520 NPHP3Q7Z494 1330 aa4.71□□□□□ -1.66
HMGB1P26-201ENST00000452520 DHX29Q7Z478 1369 aaKnown RBP4.7□□□□□ -1.66
HMGB1P26-201ENST00000452520 HEG1Q9ULI3 1381 aa4.7□□□□□ -1.66
HMGB1P26-201ENST00000452520 A0A0G2JNG1 304 aa4.7□□□□□ -1.66
HMGB1P26-201ENST00000452520 TRBV2A0A0J9YWF9 115 aa4.7□□□□□ -1.66
HMGB1P26-201ENST00000452520 TEX13DA0A0J9YY54 714 aaPredicted RBP4.7□□□□□ -1.66
HMGB1P26-201ENST00000452520 C2orf92A0A1B0GVN3 265 aa4.7□□□□□ -1.66
HMGB1P26-201ENST00000452520 A0A1W2PPK0 400 aa4.7□□□□□ -1.66
HMGB1P26-201ENST00000452520 KPNA7A9QM74 516 aa4.7□□□□□ -1.66
HMGB1P26-201ENST00000452520 H0YIG0 161 aa4.7□□□□□ -1.66
HMGB1P26-201ENST00000452520 PRAF2O60831 178 aa4.7□□□□□ -1.66
HMGB1P26-201ENST00000452520 ATP9AO75110 1047 aa4.7□□□□□ -1.66
HMGB1P26-201ENST00000452520 GSRP00390 522 aa4.7□□□□□ -1.66
HMGB1P26-201ENST00000452520 MT-ATP6P00846 226 aa4.7□□□□□ -1.66
HMGB1P26-201ENST00000452520 LDLRP01130 860 aa4.7□□□□□ -1.66
HMGB1P26-201ENST00000452520 IGHV2-70P01814 119 aa4.7□□□□□ -1.66
HMGB1P26-201ENST00000452520 KRT19P08727 400 aa4.7□□□□□ -1.66
HMGB1P26-201ENST00000452520 EPCAMP16422 314 aa4.7□□□□□ -1.66
HMGB1P26-201ENST00000452520 ARF4P18085 180 aaPredicted RBP4.7□□□□□ -1.66
HMGB1P26-201ENST00000452520 DGKAP23743 735 aa4.7□□□□□ -1.66
HMGB1P26-201ENST00000452520 CHRNA3P32297 505 aa4.7□□□□□ -1.66
HMGB1P26-201ENST00000452520 NPBWR1P48145 328 aa4.7□□□□□ -1.66
HMGB1P26-201ENST00000452520 SMSP52788 366 aa4.7□□□□□ -1.66
HMGB1P26-201ENST00000452520 GALK2Q01415 458 aa4.7□□□□□ -1.66
HMGB1P26-201ENST00000452520 GCNT1Q02742 428 aa4.7□□□□□ -1.66
HMGB1P26-201ENST00000452520 POU3F1Q03052 451 aaPredicted RBP4.7□□□□□ -1.66
HMGB1P26-201ENST00000452520 KIR2DS5Q14953 304 aa4.7□□□□□ -1.66
HMGB1P26-201ENST00000452520 SPOUT1Q5T280 376 aaKnown RBP4.7□□□□□ -1.66
HMGB1P26-201ENST00000452520 KCTD11Q693B1 232 aa4.7□□□□□ -1.66
HMGB1P26-201ENST00000452520 NEK5Q6P3R8 708 aa4.7□□□□□ -1.66
HMGB1P26-201ENST00000452520 BTNL8Q6UX41 500 aa4.7□□□□□ -1.66
HMGB1P26-201ENST00000452520 KCTD8Q6ZWB6 473 aa4.7□□□□□ -1.66
HMGB1P26-201ENST00000452520 DGLUCYQ7Z3D6 616 aa4.7□□□□□ -1.66
HMGB1P26-201ENST00000452520 PIWIL4Q7Z3Z4 852 aaKnown RBP4.7□□□□□ -1.66
HMGB1P26-201ENST00000452520 ARHGAP22Q7Z5H3 698 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms