RNA–Protein interactions for RNA: ENST00000451859.5

RFX3-209, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-209ENST00000451859 WASHC2DQ5SRD0 308 aa8.3□□□□□ -1.08
RFX3-209ENST00000451859 THEMIS2Q5TEJ8 643 aa8.3□□□□□ -1.08
RFX3-209ENST00000451859 ZNF549Q6P9A3 640 aa8.3□□□□□ -1.08
RFX3-209ENST00000451859 MED25Q71SY5 747 aa8.3□□□□□ -1.08
RFX3-209ENST00000451859 PIWIL4Q7Z3Z4 852 aaKnown RBP8.3□□□□□ -1.08
RFX3-209ENST00000451859 PPP1R32Q7Z5V6 425 aa8.3□□□□□ -1.08
RFX3-209ENST00000451859 KCNMB4Q86W47 210 aa8.3□□□□□ -1.08
RFX3-209ENST00000451859 KLHL7Q8IXQ5 586 aa8.3□□□□□ -1.08
RFX3-209ENST00000451859 PPIL6Q8IXY8 311 aa8.3□□□□□ -1.08
RFX3-209ENST00000451859 CPNE9Q8IYJ1 553 aa8.3□□□□□ -1.08
RFX3-209ENST00000451859 OR4N4Q8N0Y3 316 aa8.3□□□□□ -1.08
RFX3-209ENST00000451859 NAT8LQ8N9F0 302 aa8.3□□□□□ -1.08
RFX3-209ENST00000451859 TMEM102Q8N9M5 508 aaPredicted RBP8.3□□□□□ -1.08
RFX3-209ENST00000451859 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.3□□□□□ -1.08
RFX3-209ENST00000451859 OR2Y1Q8NGV0 311 aa8.3□□□□□ -1.08
RFX3-209ENST00000451859 CFAP36Q96G28 342 aa8.3□□□□□ -1.08
RFX3-209ENST00000451859 SIGLEC10Q96LC7 697 aa8.3□□□□□ -1.08
RFX3-209ENST00000451859 PKP4Q99569 1192 aa8.3□□□□□ -1.08
RFX3-209ENST00000451859 NDNQ99608 321 aa8.3□□□□□ -1.08
RFX3-209ENST00000451859 SOX17Q9H6I2 414 aaPredicted RBP8.3□□□□□ -1.08
RFX3-209ENST00000451859 MRPS30Q9NP92 439 aaKnown RBP8.3□□□□□ -1.08
RFX3-209ENST00000451859 FAM114A2Q9NRY5 505 aa8.3□□□□□ -1.08
RFX3-209ENST00000451859 SLC22A11Q9NSA0 550 aa8.3□□□□□ -1.08
RFX3-209ENST00000451859 P4HTMQ9NXG6 502 aa8.3□□□□□ -1.08
RFX3-209ENST00000451859 SLC17A6Q9P2U8 582 aa8.3□□□□□ -1.08
RFX3-209ENST00000451859 CTSFQ9UBX1 484 aa8.3□□□□□ -1.08
RFX3-209ENST00000451859 ZC3H7BQ9UGR2 993 aaKnown RBP8.3□□□□□ -1.08
RFX3-209ENST00000451859 CDC23Q9UJX2 597 aa8.3□□□□□ -1.08
RFX3-209ENST00000451859 FBXO5Q9UKT4 447 aa8.3□□□□□ -1.08
RFX3-209ENST00000451859 ZNF451Q9Y4E5 1061 aa8.3□□□□□ -1.08
RFX3-209ENST00000451859 HIVEP3Q5T1R4 2406 aa8.3□□□□□ -1.08
RFX3-209ENST00000451859 LRRK2Q5S007 2527 aa8.29□□□□□ -1.08
RFX3-209ENST00000451859 MAGEB16A2A368 324 aa8.29□□□□□ -1.08
RFX3-209ENST00000451859 HYKKA2RU49 373 aa8.29□□□□□ -1.08
RFX3-209ENST00000451859 MYO1CO00159 1063 aa8.29□□□□□ -1.08
RFX3-209ENST00000451859 DNALI1O14645 258 aaPredicted RBP8.29□□□□□ -1.08
RFX3-209ENST00000451859 FFAR3O14843 346 aa8.29□□□□□ -1.08
RFX3-209ENST00000451859 GPR42O15529 346 aa8.29□□□□□ -1.08
RFX3-209ENST00000451859 VPS26AO75436 327 aa8.29□□□□□ -1.08
RFX3-209ENST00000451859 PSIP1O75475 530 aaKnown RBP8.29□□□□□ -1.08
RFX3-209ENST00000451859 HAUS5O94927 633 aa8.29□□□□□ -1.08
RFX3-209ENST00000451859 MED26O95402 600 aa8.29□□□□□ -1.08
RFX3-209ENST00000451859 PGAM1P18669 254 aa8.29□□□□□ -1.08
RFX3-209ENST00000451859 ATP5DP30049 168 aa8.29□□□□□ -1.08
RFX3-209ENST00000451859 MAGEA3P43357 314 aa8.29□□□□□ -1.08
RFX3-209ENST00000451859 UQCRFS1P47985 274 aa8.29□□□□□ -1.08
RFX3-209ENST00000451859 PNLIPRP1P54315 467 aa8.29□□□□□ -1.08
RFX3-209ENST00000451859 ADARP55265 1226 aaKnown RBP8.29□□□□□ -1.08
RFX3-209ENST00000451859 GNG11P61952 73 aa8.29□□□□□ -1.08
RFX3-209ENST00000451859 DHX9Q08211 1270 aaKnown RBP8.29□□□□□ -1.08
RFX3-209ENST00000451859 PTK6Q13882 451 aa8.29□□□□□ -1.08
RFX3-209ENST00000451859 SSPNQ14714 243 aa8.29□□□□□ -1.08
RFX3-209ENST00000451859 CRYMQ14894 314 aa8.29□□□□□ -1.08
RFX3-209ENST00000451859 NKG7Q16617 165 aa8.29□□□□□ -1.08
RFX3-209ENST00000451859 TCTE1Q5JU00 501 aa8.29□□□□□ -1.08
RFX3-209ENST00000451859 DCAF10Q5QP82 559 aa8.29□□□□□ -1.08
RFX3-209ENST00000451859 RNASEH2BQ5TBB1 312 aaKnown RBP8.29□□□□□ -1.08
RFX3-209ENST00000451859 UBE2R2Q712K3 238 aaPredicted RBP8.29□□□□□ -1.08
RFX3-209ENST00000451859 COX15Q7KZN9 410 aa8.29□□□□□ -1.08
RFX3-209ENST00000451859 ATCAYQ86WG3 371 aa8.29□□□□□ -1.08
RFX3-209ENST00000451859 PLD3Q8IV08 490 aa8.29□□□□□ -1.08
RFX3-209ENST00000451859 GALNT16Q8N428 558 aa8.29□□□□□ -1.08
RFX3-209ENST00000451859 CLEC1AQ8NC01 280 aa8.29□□□□□ -1.08
RFX3-209ENST00000451859 HMGCLL1Q8TB92 370 aa8.29□□□□□ -1.08
RFX3-209ENST00000451859 CPT1CQ8TCG5 803 aa8.29□□□□□ -1.08
RFX3-209ENST00000451859 CD200R1Q8TD46 325 aa8.29□□□□□ -1.08
RFX3-209ENST00000451859 CALML6Q8TD86 181 aa8.29□□□□□ -1.08
RFX3-209ENST00000451859 ZNF480Q8WV37 535 aa8.29□□□□□ -1.08
RFX3-209ENST00000451859 SMPDL3AQ92484 453 aa8.29□□□□□ -1.08
RFX3-209ENST00000451859 INPP5DQ92835 1189 aa8.29□□□□□ -1.08
RFX3-209ENST00000451859 COL26A1Q96A83 441 aa8.29□□□□□ -1.08
RFX3-209ENST00000451859 ZUFSPQ96AP4 578 aa8.29□□□□□ -1.08
RFX3-209ENST00000451859 MIB2Q96AX9 1013 aa8.29□□□□□ -1.08
RFX3-209ENST00000451859 ALKBH8Q96BT7 664 aaKnown RBP8.29□□□□□ -1.08
RFX3-209ENST00000451859 PTERQ96BW5 349 aa8.29□□□□□ -1.08
RFX3-209ENST00000451859 CABS1Q96KC9 395 aa8.29□□□□□ -1.08
RFX3-209ENST00000451859 PWWP2AQ96N64 755 aa8.29□□□□□ -1.08
RFX3-209ENST00000451859 FAM167BQ9BTA0 163 aa8.29□□□□□ -1.08
RFX3-209ENST00000451859 YIPF2Q9BWQ6 316 aa8.29□□□□□ -1.08
RFX3-209ENST00000451859 SLAMF7Q9NQ25 335 aa8.29□□□□□ -1.08
RFX3-209ENST00000451859 PPANQ9NQ55 473 aaKnown RBP8.29□□□□□ -1.08
RFX3-209ENST00000451859 TRMT6Q9UJA5 497 aaKnown RBP8.29□□□□□ -1.08
RFX3-209ENST00000451859 CHMP2BQ9UQN3 213 aa8.29□□□□□ -1.08
RFX3-209ENST00000451859 MED16Q9Y2X0 877 aa8.29□□□□□ -1.08
RFX3-209ENST00000451859 PCDHGA9Q9Y5G4 932 aaKnown RBP8.29□□□□□ -1.08
RFX3-209ENST00000451859 ICE1Q9Y2F5 2266 aa8.29□□□□□ -1.08
RFX3-209ENST00000451859 SPTBN1Q01082 2364 aaKnown RBP8.29□□□□□ -1.08
RFX3-209ENST00000451859 DIDO1Q9BTC0 2240 aaKnown RBP8.28□□□□□ -1.08
RFX3-209ENST00000451859 TARM1B6A8C7 271 aa8.28□□□□□ -1.08
RFX3-209ENST00000451859 H0YGG7 62 aa8.28□□□□□ -1.08
RFX3-209ENST00000451859 ZBTB14O43829 449 aa8.28□□□□□ -1.08
RFX3-209ENST00000451859 DPM1O60762 260 aa8.28□□□□□ -1.08
RFX3-209ENST00000451859 CEACAM4O75871 244 aa8.28□□□□□ -1.08
RFX3-209ENST00000451859 FKBP9O95302 570 aa8.28□□□□□ -1.08
RFX3-209ENST00000451859 SLC16A8O95907 504 aa8.28□□□□□ -1.08
RFX3-209ENST00000451859 CD63P08962 238 aa8.28□□□□□ -1.08
RFX3-209ENST00000451859 PIM1P11309 404 aaPredicted RBP8.28□□□□□ -1.08
RFX3-209ENST00000451859 TCP1P17987 556 aaKnown RBP8.28□□□□□ -1.08
RFX3-209ENST00000451859 FBLP22087 321 aaKnown RBP8.28□□□□□ -1.08
RFX3-209ENST00000451859 ITGA3P26006 1051 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms