RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 H0YGG7 62 aa9.25□□□□□ -0.93
USP54-207ENST00000451492 PEX12O00623 359 aa9.25□□□□□ -0.93
USP54-207ENST00000451492 SEC31AO94979 1220 aaKnown RBP9.25□□□□□ -0.93
USP54-207ENST00000451492 CCNDBP1O95273 360 aa9.25□□□□□ -0.93
USP54-207ENST00000451492 AHSGP02765 367 aa9.25□□□□□ -0.93
USP54-207ENST00000451492 UMODP07911 640 aa9.25□□□□□ -0.93
USP54-207ENST00000451492 GABRB3P28472 473 aa9.25□□□□□ -0.93
USP54-207ENST00000451492 RPL21P46778 160 aaKnown RBP9.25□□□□□ -0.93
USP54-207ENST00000451492 RGS4P49798 205 aa9.25□□□□□ -0.93
USP54-207ENST00000451492 RRADP55042 308 aa9.25□□□□□ -0.93
USP54-207ENST00000451492 ARF3P61204 181 aaPredicted RBP9.25□□□□□ -0.93
USP54-207ENST00000451492 ZNF460Q14592 562 aa9.25□□□□□ -0.93
USP54-207ENST00000451492 HECTD2Q5U5R9 776 aa9.25□□□□□ -0.93
USP54-207ENST00000451492 MRPL14Q6P1L8 145 aaKnown RBP9.25□□□□□ -0.93
USP54-207ENST00000451492 PAQR3Q6TCH7 311 aa9.25□□□□□ -0.93
USP54-207ENST00000451492 SYDE1Q6ZW31 735 aaPredicted RBP9.25□□□□□ -0.93
USP54-207ENST00000451492 PAQR7Q86WK9 346 aa9.25□□□□□ -0.93
USP54-207ENST00000451492 PALM2Q8IXS6 379 aa9.25□□□□□ -0.93
USP54-207ENST00000451492 CLEC1AQ8NC01 280 aa9.25□□□□□ -0.93
USP54-207ENST00000451492 OR2Y1Q8NGV0 311 aa9.25□□□□□ -0.93
USP54-207ENST00000451492 ASB11Q8WXH4 323 aa9.25□□□□□ -0.93
USP54-207ENST00000451492 COL26A1Q96A83 441 aa9.25□□□□□ -0.93
USP54-207ENST00000451492 C10orf90Q96M02 699 aa9.25□□□□□ -0.93
USP54-207ENST00000451492 PLCD4Q9BRC7 762 aa9.25□□□□□ -0.93
USP54-207ENST00000451492 ATG10Q9H0Y0 220 aa9.25□□□□□ -0.93
USP54-207ENST00000451492 PLAC1Q9HBJ0 212 aa9.25□□□□□ -0.93
USP54-207ENST00000451492 CCDC177Q9NQR7 707 aaPredicted RBP9.25□□□□□ -0.93
USP54-207ENST00000451492 GPR83Q9NYM4 423 aa9.25□□□□□ -0.93
USP54-207ENST00000451492 ZFATQ9P243 1243 aa9.25□□□□□ -0.93
USP54-207ENST00000451492 G3BP2Q9UN86 482 aaKnown RBP9.25□□□□□ -0.93
USP54-207ENST00000451492 PLAAQ9Y263 795 aa9.25□□□□□ -0.93
USP54-207ENST00000451492 HELZ2Q9BYK8 2649 aaKnown RBP9.25□□□□□ -0.93
USP54-207ENST00000451492 TLN1Q9Y490 2541 aaKnown RBP9.25□□□□□ -0.93
USP54-207ENST00000451492 FEZF1A0PJY2 475 aa9.24□□□□□ -0.93
USP54-207ENST00000451492 E7ENX8 843 aa9.24□□□□□ -0.93
USP54-207ENST00000451492 P2RX6O15547 441 aa9.24□□□□□ -0.93
USP54-207ENST00000451492 PIAS1O75925 651 aa9.24□□□□□ -0.93
USP54-207ENST00000451492 FKBP9O95302 570 aa9.24□□□□□ -0.93
USP54-207ENST00000451492 GUCA1CO95843 209 aa9.24□□□□□ -0.93
USP54-207ENST00000451492 PIM1P11309 404 aaPredicted RBP9.24□□□□□ -0.93
USP54-207ENST00000451492 FBLP22087 321 aaKnown RBP9.24□□□□□ -0.93
USP54-207ENST00000451492 CASQ1P31415 396 aa9.24□□□□□ -0.93
USP54-207ENST00000451492 GCGRP47871 477 aa9.24□□□□□ -0.93
USP54-207ENST00000451492 CSRP3P50461 194 aa9.24□□□□□ -0.93
USP54-207ENST00000451492 TIAL1Q01085 375 aaKnown RBP eCLIP9.24□□□□□ -0.93
USP54-207ENST00000451492 TAP2Q03519 686 aa9.24□□□□□ -0.93
USP54-207ENST00000451492 SSPNQ14714 243 aa9.24□□□□□ -0.93
USP54-207ENST00000451492 ARHGAP19Q14CB8 494 aa9.24□□□□□ -0.93
USP54-207ENST00000451492 NAA25Q14CX7 972 aa9.24□□□□□ -0.93
USP54-207ENST00000451492 RBBP7Q16576 425 aa9.24□□□□□ -0.93
USP54-207ENST00000451492 NKG7Q16617 165 aa9.24□□□□□ -0.93
USP54-207ENST00000451492 PHKG1Q16816 387 aa9.24□□□□□ -0.93
USP54-207ENST00000451492 FAM214AQ32MH5 1076 aa9.24□□□□□ -0.93
USP54-207ENST00000451492 TEDDM1Q5T9Z0 273 aa9.24□□□□□ -0.93
USP54-207ENST00000451492 PRAMEF13Q5VWM6 474 aa9.24□□□□□ -0.93
USP54-207ENST00000451492 FAAH2Q6GMR7 532 aa9.24□□□□□ -0.93
USP54-207ENST00000451492 FAM45BPQ6NSW5 357 aa9.24□□□□□ -0.93
USP54-207ENST00000451492 SYT10Q6XYQ8 523 aa9.24□□□□□ -0.93
USP54-207ENST00000451492 CYHR1Q6ZMK1 362 aa9.24□□□□□ -0.93
USP54-207ENST00000451492 MED25Q71SY5 747 aa9.24□□□□□ -0.93
USP54-207ENST00000451492 PPP1R32Q7Z5V6 425 aa9.24□□□□□ -0.93
USP54-207ENST00000451492 CNTN4Q8IWV2 1026 aa9.24□□□□□ -0.93
USP54-207ENST00000451492 ZBED8Q8IZ13 594 aa9.24□□□□□ -0.93
USP54-207ENST00000451492 CSNK1A1LQ8N752 337 aa9.24□□□□□ -0.93
USP54-207ENST00000451492 TMEM102Q8N9M5 508 aaPredicted RBP9.24□□□□□ -0.93
USP54-207ENST00000451492 ZCCHC10Q8TBK6 192 aa9.24□□□□□ -0.93
USP54-207ENST00000451492 FAM45AQ8TCE6 357 aa9.24□□□□□ -0.93
USP54-207ENST00000451492 RERGQ96A58 199 aaPredicted RBP9.24□□□□□ -0.93
USP54-207ENST00000451492 FKBP10Q96AY3 582 aa9.24□□□□□ -0.93
USP54-207ENST00000451492 MMABQ96EY8 250 aaPredicted RBP9.24□□□□□ -0.93
USP54-207ENST00000451492 OLFM1Q99784 485 aa9.24□□□□□ -0.93
USP54-207ENST00000451492 MESP1Q9BRJ9 268 aa9.24□□□□□ -0.93
USP54-207ENST00000451492 NAT9Q9BTE0 207 aa9.24□□□□□ -0.93
USP54-207ENST00000451492 ZNF304Q9HCX3 659 aa9.24□□□□□ -0.93
USP54-207ENST00000451492 P4HTMQ9NXG6 502 aa9.24□□□□□ -0.93
USP54-207ENST00000451492 UTP6Q9NYH9 597 aaKnown RBP9.24□□□□□ -0.93
USP54-207ENST00000451492 FBXL4Q9UKA2 621 aa9.24□□□□□ -0.93
USP54-207ENST00000451492 SH2B3Q9UQQ2 575 aa9.24□□□□□ -0.93
USP54-207ENST00000451492 PDE10AQ9Y233 779 aa9.24□□□□□ -0.93
USP54-207ENST00000451492 RUVBL1Q9Y265 456 aaKnown RBP9.24□□□□□ -0.93
USP54-207ENST00000451492 PSAT1Q9Y617 370 aa9.24□□□□□ -0.93
USP54-207ENST00000451492 TEX264Q9Y6I9 313 aa9.24□□□□□ -0.93
USP54-207ENST00000451492 DOCK10Q96BY6 2186 aa9.24□□□□□ -0.93
USP54-207ENST00000451492 SEC16AO15027 2179 aa9.23□□□□□ -0.93
USP54-207ENST00000451492 A0A0A6YYC8 382 aaPredicted RBP9.23□□□□□ -0.93
USP54-207ENST00000451492 FITM1A5D6W6 292 aa9.23□□□□□ -0.93
USP54-207ENST00000451492 NPEPPSL1A6NEC2 478 aa9.23□□□□□ -0.93
USP54-207ENST00000451492 TTLL8A6PVC2 850 aa9.23□□□□□ -0.93
USP54-207ENST00000451492 H7BY64 318 aa9.23□□□□□ -0.93
USP54-207ENST00000451492 I3L1I5 382 aaPredicted RBP9.23□□□□□ -0.93
USP54-207ENST00000451492 GFYI3L273 518 aa9.23□□□□□ -0.93
USP54-207ENST00000451492 RAD51CO43502 376 aa9.23□□□□□ -0.93
USP54-207ENST00000451492 SRPX2O60687 465 aaPredicted RBP9.23□□□□□ -0.93
USP54-207ENST00000451492 C8GP07360 202 aa9.23□□□□□ -0.93
USP54-207ENST00000451492 CDH1P12830 882 aa9.23□□□□□ -0.93
USP54-207ENST00000451492 EZRP15311 586 aaKnown RBP9.23□□□□□ -0.93
USP54-207ENST00000451492 ITGA3P26006 1051 aa9.23□□□□□ -0.93
USP54-207ENST00000451492 HSD17B2P37059 387 aa9.23□□□□□ -0.93
USP54-207ENST00000451492 SKIV2L2P42285 1042 aaKnown RBP9.23□□□□□ -0.93
USP54-207ENST00000451492 MEF2AQ02078 507 aaPredicted RBP9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms