RNA–Protein interactions for RNA: ENST00000450717.7

SMARCA4-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5 BASIC

Gene SMARCA4, Length 5,506 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-205ENST00000450717 COL21A1Q96P44 957 aa12.87□□□□□ -0.35
SMARCA4-205ENST00000450717 GMLQ99445 158 aa12.87□□□□□ -0.35
SMARCA4-205ENST00000450717 GSDMCQ9BYG8 508 aa12.87□□□□□ -0.35
SMARCA4-205ENST00000450717 PFDN2Q9UHV9 154 aa12.87□□□□□ -0.35
SMARCA4-205ENST00000450717 LOC100130705A0A1B0GUX0 176 aa12.87□□□□□ -0.35
SMARCA4-205ENST00000450717 F7P08709 466 aaPredicted RBP12.87□□□□□ -0.35
SMARCA4-205ENST00000450717 G6PDP11413 515 aa12.87□□□□□ -0.35
SMARCA4-205ENST00000450717 ZNF630Q2M218 657 aaPredicted RBP12.87□□□□□ -0.35
SMARCA4-205ENST00000450717 C22orf39Q6P5X5 142 aa12.87□□□□□ -0.35
SMARCA4-205ENST00000450717 RANBP9Q96S59 729 aa12.87□□□□□ -0.35
SMARCA4-205ENST00000450717 ITPAQ9BY32 194 aa12.87□□□□□ -0.35
SMARCA4-205ENST00000450717 NEUROD4Q9HD90 331 aa12.87□□□□□ -0.35
SMARCA4-205ENST00000450717 KCTD3Q9Y597 815 aa12.87□□□□□ -0.35
SMARCA4-205ENST00000450717 PDLIM1O00151 329 aa12.87□□□□□ -0.35
SMARCA4-205ENST00000450717 CREG1O75629 220 aa12.87□□□□□ -0.35
SMARCA4-205ENST00000450717 SLC11A1P49279 550 aa12.87□□□□□ -0.35
SMARCA4-205ENST00000450717 SMARCD3Q6STE5 483 aa12.87□□□□□ -0.35
SMARCA4-205ENST00000450717 NAPRTQ6XQN6 538 aa12.87□□□□□ -0.35
SMARCA4-205ENST00000450717 CCDC80Q76M96 950 aa12.87□□□□□ -0.35
SMARCA4-205ENST00000450717 LRCH3Q96II8 777 aa12.87□□□□□ -0.35
SMARCA4-205ENST00000450717 SLC39A3Q9BRY0 314 aa12.87□□□□□ -0.35
SMARCA4-205ENST00000450717 CCDC106Q9BWC9 280 aa12.87□□□□□ -0.35
SMARCA4-205ENST00000450717 ANKHQ9HCJ1 492 aa12.87□□□□□ -0.35
SMARCA4-205ENST00000450717 SNTG1Q9NSN8 517 aa12.87□□□□□ -0.35
SMARCA4-205ENST00000450717 DCLK1O15075 740 aa12.87□□□□□ -0.35
SMARCA4-205ENST00000450717 OAS1P00973 400 aaKnown RBP12.87□□□□□ -0.35
SMARCA4-205ENST00000450717 RFC2P35250 354 aa12.87□□□□□ -0.35
SMARCA4-205ENST00000450717 LEPRP48357 1165 aaKnown RBP12.87□□□□□ -0.35
SMARCA4-205ENST00000450717 OLIG2Q13516 323 aa12.87□□□□□ -0.35
SMARCA4-205ENST00000450717 LRRC66Q68CR7 880 aa12.87□□□□□ -0.35
SMARCA4-205ENST00000450717 TXNDC8Q6A555 127 aa12.87□□□□□ -0.35
SMARCA4-205ENST00000450717 SIX5Q8N196 739 aa12.87□□□□□ -0.35
SMARCA4-205ENST00000450717 TRIB3Q96RU7 358 aa12.87□□□□□ -0.35
SMARCA4-205ENST00000450717 OR51V1Q9H2C8 321 aa12.87□□□□□ -0.35
SMARCA4-205ENST00000450717 TRBC2A0A5B9 178 aa12.87□□□□□ -0.35
SMARCA4-205ENST00000450717 SNX4O95219 450 aa12.87□□□□□ -0.35
SMARCA4-205ENST00000450717 RENP00797 406 aa12.87□□□□□ -0.35
SMARCA4-205ENST00000450717 KLK1P06870 262 aa12.87□□□□□ -0.35
SMARCA4-205ENST00000450717 AZGP1P25311 298 aaKnown RBP12.87□□□□□ -0.35
SMARCA4-205ENST00000450717 MAT2AP31153 395 aaKnown RBP12.87□□□□□ -0.35
SMARCA4-205ENST00000450717 C15orf39Q6ZRI6 1047 aa12.87□□□□□ -0.35
SMARCA4-205ENST00000450717 KAT2AQ92830 837 aa12.87□□□□□ -0.35
SMARCA4-205ENST00000450717 FATE1Q969F0 183 aa12.87□□□□□ -0.35
SMARCA4-205ENST00000450717 CEP295NLQ96MC4 621 aa12.87□□□□□ -0.35
SMARCA4-205ENST00000450717 KCNC2Q96PR1 638 aa12.87□□□□□ -0.35
SMARCA4-205ENST00000450717 PSAT1Q9Y617 370 aa12.87□□□□□ -0.35
SMARCA4-205ENST00000450717 COL2A1P02458 1487 aaPredicted RBP12.86□□□□□ -0.35
SMARCA4-205ENST00000450717 CDK6Q00534 326 aa12.86□□□□□ -0.35
SMARCA4-205ENST00000450717 TGFBIQ15582 683 aa12.86□□□□□ -0.35
SMARCA4-205ENST00000450717 SWI5Q1ZZU3 235 aa12.86□□□□□ -0.35
SMARCA4-205ENST00000450717 C10orf62Q5T681 223 aaPredicted RBP12.86□□□□□ -0.35
SMARCA4-205ENST00000450717 RNF19BQ6ZMZ0 732 aa12.86□□□□□ -0.35
SMARCA4-205ENST00000450717 NXPE1Q8N323 547 aa12.86□□□□□ -0.35
SMARCA4-205ENST00000450717 TAMM41Q96BW9 452 aa12.86□□□□□ -0.35
SMARCA4-205ENST00000450717 GAL3ST4Q96RP7 486 aa12.86□□□□□ -0.35
SMARCA4-205ENST00000450717 ZNF382Q96SR6 550 aa12.86□□□□□ -0.35
SMARCA4-205ENST00000450717 TM9SF3Q9HD45 589 aa12.86□□□□□ -0.35
SMARCA4-205ENST00000450717 C14orf105Q9NVL8 296 aa12.86□□□□□ -0.35
SMARCA4-205ENST00000450717 SRRDQ9UH36 339 aa12.86□□□□□ -0.35
SMARCA4-205ENST00000450717 TOPAZ1Q8N9V7 1692 aa12.86□□□□□ -0.35
SMARCA4-205ENST00000450717 ANXA2P2A6NMY6 339 aa12.86□□□□□ -0.35
SMARCA4-205ENST00000450717 ANXA2P07355 339 aaKnown RBP12.86□□□□□ -0.35
SMARCA4-205ENST00000450717 ACP5P13686 325 aa12.86□□□□□ -0.35
SMARCA4-205ENST00000450717 BDKRB1P46663 353 aa12.86□□□□□ -0.35
SMARCA4-205ENST00000450717 MASP1P48740 699 aa12.86□□□□□ -0.35
SMARCA4-205ENST00000450717 PLEKHS1Q5SXH7 462 aa12.86□□□□□ -0.35
SMARCA4-205ENST00000450717 ANO7Q6IWH7 933 aa12.86□□□□□ -0.35
SMARCA4-205ENST00000450717 Q6ZVU0 165 aa12.86□□□□□ -0.35
SMARCA4-205ENST00000450717 NUP54Q7Z3B4 507 aa12.86□□□□□ -0.35
SMARCA4-205ENST00000450717 CAMKVQ8NCB2 501 aa12.86□□□□□ -0.35
SMARCA4-205ENST00000450717 KCTD7Q96MP8 289 aa12.86□□□□□ -0.35
SMARCA4-205ENST00000450717 TCF7L1Q9HCS4 588 aa12.86□□□□□ -0.35
SMARCA4-205ENST00000450717 INSL6Q9Y581 213 aa12.86□□□□□ -0.35
SMARCA4-205ENST00000450717 PHRF1Q9P1Y6 1649 aaKnown RBP12.86□□□□□ -0.35
SMARCA4-205ENST00000450717 CPSF4LA6NMK7 179 aaKnown RBP12.86□□□□□ -0.35
SMARCA4-205ENST00000450717 ACOX3O15254 700 aa12.86□□□□□ -0.35
SMARCA4-205ENST00000450717 SOCS5O75159 536 aa12.86□□□□□ -0.35
SMARCA4-205ENST00000450717 CNTN5O94779 1100 aa12.86□□□□□ -0.35
SMARCA4-205ENST00000450717 SNAI1O95863 264 aaPredicted RBP12.86□□□□□ -0.35
SMARCA4-205ENST00000450717 CD2P06729 351 aa12.86□□□□□ -0.35
SMARCA4-205ENST00000450717 CSTF2P33240 577 aaKnown RBP eCLIP12.86□□□□□ -0.35
SMARCA4-205ENST00000450717 CLCN7P51798 805 aa12.86□□□□□ -0.35
SMARCA4-205ENST00000450717 GBX2P52951 348 aaPredicted RBP12.86□□□□□ -0.35
SMARCA4-205ENST00000450717 TUBA1BP68363 451 aa12.86□□□□□ -0.35
SMARCA4-205ENST00000450717 EMC10Q5UCC4 262 aa12.86□□□□□ -0.35
SMARCA4-205ENST00000450717 TUBA1AQ71U36 451 aa12.86□□□□□ -0.35
SMARCA4-205ENST00000450717 CLIP4Q8N3C7 705 aa12.86□□□□□ -0.35
SMARCA4-205ENST00000450717 ZNF461Q8TAF7 563 aa12.86□□□□□ -0.35
SMARCA4-205ENST00000450717 MND1Q9BWT6 205 aa12.86□□□□□ -0.35
SMARCA4-205ENST00000450717 ADAM7Q9H2U9 754 aa12.86□□□□□ -0.35
SMARCA4-205ENST00000450717 CICQ96RK0 1608 aaPredicted RBP12.86□□□□□ -0.35
SMARCA4-205ENST00000450717 TLX3O43711 291 aaPredicted RBP12.86□□□□□ -0.35
SMARCA4-205ENST00000450717 ZNF823P16415 610 aa12.86□□□□□ -0.35
SMARCA4-205ENST00000450717 SMSP52788 366 aa12.86□□□□□ -0.35
SMARCA4-205ENST00000450717 RING1Q06587 406 aa12.86□□□□□ -0.35
SMARCA4-205ENST00000450717 UPP1Q16831 310 aa12.86□□□□□ -0.35
SMARCA4-205ENST00000450717 FAM43BQ6ZT52 329 aaPredicted RBP12.86□□□□□ -0.35
SMARCA4-205ENST00000450717 ARMCX6Q7L4S7 300 aa12.86□□□□□ -0.35
SMARCA4-205ENST00000450717 KLHL6Q8WZ60 621 aa12.86□□□□□ -0.35
SMARCA4-205ENST00000450717 RDH12Q96NR8 316 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms