RNA–Protein interactions for RNA: ENST00000449971.5

FAM3A-216, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 1,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-216ENST00000449971 CMPK1P30085 196 aa16.79■□□□□ 0.28
FAM3A-216ENST00000449971 RPA3P35244 121 aaPredicted RBP16.79■□□□□ 0.28
FAM3A-216ENST00000449971 HSD17B2P37059 387 aa16.79■□□□□ 0.28
FAM3A-216ENST00000449971 DCDP81605 110 aaKnown RBP16.79■□□□□ 0.28
FAM3A-216ENST00000449971 ELOAQ14241 798 aaKnown RBP16.79■□□□□ 0.28
FAM3A-216ENST00000449971 FAM198BQ6UWH4 519 aa16.79■□□□□ 0.28
FAM3A-216ENST00000449971 SUSD1Q6UWL2 747 aa16.79■□□□□ 0.28
FAM3A-216ENST00000449971 ANKMY2Q8IV38 441 aa16.79■□□□□ 0.28
FAM3A-216ENST00000449971 LRRC39Q96DD0 335 aa16.79■□□□□ 0.28
FAM3A-216ENST00000449971 PLAC1Q9HBJ0 212 aa16.79■□□□□ 0.28
FAM3A-216ENST00000449971 ABCF3Q9NUQ8 709 aa16.79■□□□□ 0.28
FAM3A-216ENST00000449971 GPN3Q9UHW5 284 aaPredicted RBP16.79■□□□□ 0.28
FAM3A-216ENST00000449971 SPTBP11277 2137 aa16.78■□□□□ 0.28
FAM3A-216ENST00000449971 ANKRD17O75179 2603 aaKnown RBP16.78■□□□□ 0.28
FAM3A-216ENST00000449971 ARHGAP10A1A4S6 786 aa16.78■□□□□ 0.28
FAM3A-216ENST00000449971 ANKUB1A6NFN9 424 aa16.78■□□□□ 0.28
FAM3A-216ENST00000449971 ZNF839A8K0R7 811 aa16.78■□□□□ 0.28
FAM3A-216ENST00000449971 VARSP26640 1264 aaKnown RBP16.78■□□□□ 0.28
FAM3A-216ENST00000449971 SKIV2L2P42285 1042 aaKnown RBP16.78■□□□□ 0.28
FAM3A-216ENST00000449971 RPL21P46778 160 aaKnown RBP16.78■□□□□ 0.28
FAM3A-216ENST00000449971 PNLIPRP1P54315 467 aa16.78■□□□□ 0.28
FAM3A-216ENST00000449971 ETF1P62495 437 aaKnown RBP16.78■□□□□ 0.28
FAM3A-216ENST00000449971 YBX1P67809 324 aaKnown RBP16.78■□□□□ 0.28
FAM3A-216ENST00000449971 PDIA2Q13087 525 aaKnown RBP16.78■□□□□ 0.28
FAM3A-216ENST00000449971 ARHGAP19Q14CB8 494 aa16.78■□□□□ 0.28
FAM3A-216ENST00000449971 NCF4Q15080 339 aa16.78■□□□□ 0.28
FAM3A-216ENST00000449971 PLEKHN1Q494U1 663 aaPredicted RBP16.78■□□□□ 0.28
FAM3A-216ENST00000449971 TEDDM1Q5T9Z0 273 aa16.78■□□□□ 0.28
FAM3A-216ENST00000449971 ZNF385CQ66K41 422 aaPredicted RBP16.78■□□□□ 0.28
FAM3A-216ENST00000449971 SYT10Q6XYQ8 523 aa16.78■□□□□ 0.28
FAM3A-216ENST00000449971 KIAA0408Q6ZU52 694 aa16.78■□□□□ 0.28
FAM3A-216ENST00000449971 UBE2R2Q712K3 238 aaPredicted RBP16.78■□□□□ 0.28
FAM3A-216ENST00000449971 PIWIL4Q7Z3Z4 852 aaKnown RBP16.78■□□□□ 0.28
FAM3A-216ENST00000449971 TICAM1Q8IUC6 712 aa16.78■□□□□ 0.28
FAM3A-216ENST00000449971 CNTN4Q8IWV2 1026 aa16.78■□□□□ 0.28
FAM3A-216ENST00000449971 SPATA4Q8NEY3 305 aa16.78■□□□□ 0.28
FAM3A-216ENST00000449971 PROKR1Q8TCW9 393 aa16.78■□□□□ 0.28
FAM3A-216ENST00000449971 EEF1AKMT1Q8WVE0 214 aa16.78■□□□□ 0.28
FAM3A-216ENST00000449971 DLG3Q92796 817 aa16.78■□□□□ 0.28
FAM3A-216ENST00000449971 GBP5Q96PP8 586 aa16.78■□□□□ 0.28
FAM3A-216ENST00000449971 C17orf62Q9BQA9 187 aa16.78■□□□□ 0.28
FAM3A-216ENST00000449971 SELENOSQ9BQE4 189 aa16.78■□□□□ 0.28
FAM3A-216ENST00000449971 TAS2R13Q9NYV9 303 aa16.78■□□□□ 0.28
FAM3A-216ENST00000449971 IFT80Q9P2H3 777 aaPredicted RBP16.78■□□□□ 0.28
FAM3A-216ENST00000449971 SLC17A6Q9P2U8 582 aa16.78■□□□□ 0.28
FAM3A-216ENST00000449971 NDOR1Q9UHB4 597 aa16.78■□□□□ 0.28
FAM3A-216ENST00000449971 PCDHGB7Q9Y5F8 929 aa16.78■□□□□ 0.28
FAM3A-216ENST00000449971 TEX264Q9Y6I9 313 aa16.78■□□□□ 0.28
FAM3A-216ENST00000449971 DIDO1Q9BTC0 2240 aaKnown RBP16.77■□□□□ 0.28
FAM3A-216ENST00000449971 A0A0J9YVX5 310 aa16.77■□□□□ 0.28
FAM3A-216ENST00000449971 WIPF3A6NGB9 483 aa16.77■□□□□ 0.28
FAM3A-216ENST00000449971 GFYI3L273 518 aa16.77■□□□□ 0.28
FAM3A-216ENST00000449971 CTSVO60911 334 aa16.77■□□□□ 0.28
FAM3A-216ENST00000449971 CEACAM4O75871 244 aa16.77■□□□□ 0.28
FAM3A-216ENST00000449971 SLC16A8O95907 504 aa16.77■□□□□ 0.28
FAM3A-216ENST00000449971 ERGP11308 486 aa16.77■□□□□ 0.28
FAM3A-216ENST00000449971 POU3F2P20265 443 aaPredicted RBP16.77■□□□□ 0.28
FAM3A-216ENST00000449971 ELAVL4P26378 380 aaKnown RBP16.77■□□□□ 0.28
FAM3A-216ENST00000449971 RGS4P49798 205 aa16.77■□□□□ 0.28
FAM3A-216ENST00000449971 ARSFP54793 590 aa16.77■□□□□ 0.28
FAM3A-216ENST00000449971 CDKN2DP55273 166 aa16.77■□□□□ 0.28
FAM3A-216ENST00000449971 VSX2P58304 361 aaPredicted RBP16.77■□□□□ 0.28
FAM3A-216ENST00000449971 TIAL1Q01085 375 aaKnown RBP eCLIP16.77■□□□□ 0.28
FAM3A-216ENST00000449971 SLC9A5Q14940 896 aa16.77■□□□□ 0.28
FAM3A-216ENST00000449971 NKAIN1Q4KMZ8 207 aa16.77■□□□□ 0.28
FAM3A-216ENST00000449971 TCTE1Q5JU00 501 aa16.77■□□□□ 0.28
FAM3A-216ENST00000449971 RBM20Q5T481 1227 aaKnown RBP16.77■□□□□ 0.28
FAM3A-216ENST00000449971 TRMT10BQ6PF06 316 aaKnown RBP16.77■□□□□ 0.28
FAM3A-216ENST00000449971 TTLL10Q6ZVT0 673 aa16.77■□□□□ 0.28
FAM3A-216ENST00000449971 IQCKQ8N0W5 287 aa16.77■□□□□ 0.28
FAM3A-216ENST00000449971 GPATCH11Q8N954 259 aa16.77■□□□□ 0.28
FAM3A-216ENST00000449971 FBXO15Q8NCQ5 510 aaPredicted RBP16.77■□□□□ 0.28
FAM3A-216ENST00000449971 BBOF1Q8ND07 529 aa16.77■□□□□ 0.28
FAM3A-216ENST00000449971 PPFIBP2Q8ND30 876 aa16.77■□□□□ 0.28
FAM3A-216ENST00000449971 WDR83Q9BRX9 315 aaKnown RBP16.77■□□□□ 0.28
FAM3A-216ENST00000449971 DPH7Q9BTV6 452 aa16.77■□□□□ 0.28
FAM3A-216ENST00000449971 DHRS4Q9BTZ2 278 aa16.77■□□□□ 0.28
FAM3A-216ENST00000449971 DPH5Q9H2P9 285 aa16.77■□□□□ 0.28
FAM3A-216ENST00000449971 MRPS30Q9NP92 439 aaKnown RBP16.77■□□□□ 0.28
FAM3A-216ENST00000449971 PADI2Q9Y2J8 665 aa16.77■□□□□ 0.28
FAM3A-216ENST00000449971 FAM187AA6NFU0 413 aa16.76■□□□□ 0.27
FAM3A-216ENST00000449971 EIF3FO00303 357 aaPredicted RBP16.76■□□□□ 0.27
FAM3A-216ENST00000449971 NDC80O14777 642 aa16.76■□□□□ 0.27
FAM3A-216ENST00000449971 SRPX2O60687 465 aaPredicted RBP16.76■□□□□ 0.27
FAM3A-216ENST00000449971 CBX6O95503 412 aa16.76■□□□□ 0.27
FAM3A-216ENST00000449971 EIF2S1P05198 315 aaKnown RBP16.76■□□□□ 0.27
FAM3A-216ENST00000449971 OTX2P32243 289 aa16.76■□□□□ 0.27
FAM3A-216ENST00000449971 C2orf54Q08AI8 447 aa16.76■□□□□ 0.27
FAM3A-216ENST00000449971 ATP1A4Q13733 1029 aa16.76■□□□□ 0.27
FAM3A-216ENST00000449971 GRM7Q14831 915 aa16.76■□□□□ 0.27
FAM3A-216ENST00000449971 NAA25Q14CX7 972 aa16.76■□□□□ 0.27
FAM3A-216ENST00000449971 WASHC2DQ5SRD0 308 aa16.76■□□□□ 0.27
FAM3A-216ENST00000449971 STEAP4Q687X5 459 aa16.76■□□□□ 0.27
FAM3A-216ENST00000449971 PAQR3Q6TCH7 311 aa16.76■□□□□ 0.27
FAM3A-216ENST00000449971 MAATS1Q7Z4T9 603 aa16.76■□□□□ 0.27
FAM3A-216ENST00000449971 PALM2Q8IXS6 379 aa16.76■□□□□ 0.27
FAM3A-216ENST00000449971 TTC29Q8NA56 475 aaPredicted RBP16.76■□□□□ 0.27
FAM3A-216ENST00000449971 FBXO36Q8NEA4 188 aa16.76■□□□□ 0.27
FAM3A-216ENST00000449971 MCOLN3Q8TDD5 553 aa16.76■□□□□ 0.27
FAM3A-216ENST00000449971 ADAMTS17Q8TE56 1095 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms