RNA–Protein interactions for RNA: ENST00000449082.2

SCN10A-201, Transcript of sodium voltage-gated channel alpha subunit 10, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN10A, Length 6,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10A-201ENST00000449082 LRIG1Q96JA1 1093 aa9.94□□□□□ -0.82
SCN10A-201ENST00000449082 CHID1Q9BWS9 393 aa9.94□□□□□ -0.82
SCN10A-201ENST00000449082 POLR2J3Q9H1A7 115 aaKnown RBP9.94□□□□□ -0.82
SCN10A-201ENST00000449082 ING3Q9NXR8 418 aa9.94□□□□□ -0.82
SCN10A-201ENST00000449082 TCRBV21S2A2A0A5A6 115 aa9.93□□□□□ -0.82
SCN10A-201ENST00000449082 MAN2B1O00754 1011 aa9.93□□□□□ -0.82
SCN10A-201ENST00000449082 AHSGP02765 367 aa9.93□□□□□ -0.82
SCN10A-201ENST00000449082 GFOD2Q3B7J2 385 aa9.93□□□□□ -0.82
SCN10A-201ENST00000449082 PRRT3Q5FWE3 981 aa9.93□□□□□ -0.82
SCN10A-201ENST00000449082 AGTRAPQ6RW13 159 aa9.93□□□□□ -0.82
SCN10A-201ENST00000449082 ZSWIM3Q96MP5 696 aa9.93□□□□□ -0.82
SCN10A-201ENST00000449082 AKTIPQ9H8T0 292 aa9.93□□□□□ -0.82
SCN10A-201ENST00000449082 MAFFQ9ULX9 164 aa9.93□□□□□ -0.82
SCN10A-201ENST00000449082 SPIN1Q9Y657 262 aaPredicted RBP9.93□□□□□ -0.82
SCN10A-201ENST00000449082 TPD52L2O43399 206 aaKnown RBP9.93□□□□□ -0.82
SCN10A-201ENST00000449082 TRMUO75648 421 aaKnown RBP9.93□□□□□ -0.82
SCN10A-201ENST00000449082 NR2C1P13056 603 aa9.93□□□□□ -0.82
SCN10A-201ENST00000449082 SHMT2P34897 504 aa9.93□□□□□ -0.82
SCN10A-201ENST00000449082 STC1P52823 247 aa9.93□□□□□ -0.82
SCN10A-201ENST00000449082 VLDLRP98155 873 aa9.93□□□□□ -0.82
SCN10A-201ENST00000449082 DUOXA1Q1HG43 343 aa9.93□□□□□ -0.82
SCN10A-201ENST00000449082 DNM1P34Q6PK57 102 aa9.93□□□□□ -0.82
SCN10A-201ENST00000449082 ZDHHC24Q6UX98 284 aa9.93□□□□□ -0.82
SCN10A-201ENST00000449082 OR6K6Q8NGW6 343 aa9.93□□□□□ -0.82
SCN10A-201ENST00000449082 GRHL3Q8TE85 626 aa9.93□□□□□ -0.82
SCN10A-201ENST00000449082 UFD1Q92890 307 aa9.93□□□□□ -0.82
SCN10A-201ENST00000449082 KIAA1143Q96AT1 154 aaPredicted RBP9.93□□□□□ -0.82
SCN10A-201ENST00000449082 PCYT2Q99447 389 aa9.93□□□□□ -0.82
SCN10A-201ENST00000449082 BHLHE41Q9C0J9 482 aaPredicted RBP9.93□□□□□ -0.82
SCN10A-201ENST00000449082 TCF7L1Q9HCS4 588 aa9.93□□□□□ -0.82
SCN10A-201ENST00000449082 DAPL1A0PJW8 107 aa9.93□□□□□ -0.82
SCN10A-201ENST00000449082 FAM221BA6H8Z2 402 aa9.93□□□□□ -0.82
SCN10A-201ENST00000449082 LOC730098B7Z3J9 87 aa9.93□□□□□ -0.82
SCN10A-201ENST00000449082 MANBAO00462 879 aa9.93□□□□□ -0.82
SCN10A-201ENST00000449082 PCDHGA12O60330 932 aa9.93□□□□□ -0.82
SCN10A-201ENST00000449082 CPNE3O75131 537 aaKnown RBP9.93□□□□□ -0.82
SCN10A-201ENST00000449082 PGLSO95336 258 aa9.93□□□□□ -0.82
SCN10A-201ENST00000449082 EPOP01588 193 aa9.93□□□□□ -0.82
SCN10A-201ENST00000449082 JMJD7P0C870 316 aa9.93□□□□□ -0.82
SCN10A-201ENST00000449082 ZNF3P17036 446 aa9.93□□□□□ -0.82
SCN10A-201ENST00000449082 FECHP22830 423 aa9.93□□□□□ -0.82
SCN10A-201ENST00000449082 RING1Q06587 406 aa9.93□□□□□ -0.82
SCN10A-201ENST00000449082 TMEM115Q12893 351 aaPredicted RBP9.93□□□□□ -0.82
SCN10A-201ENST00000449082 PLEKHG6Q3KR16 790 aa9.93□□□□□ -0.82
SCN10A-201ENST00000449082 PLEKHS1Q5SXH7 462 aa9.93□□□□□ -0.82
SCN10A-201ENST00000449082 KBTBD6Q86V97 674 aa9.93□□□□□ -0.82
SCN10A-201ENST00000449082 TMEM126BQ8IUX1 230 aa9.93□□□□□ -0.82
SCN10A-201ENST00000449082 OR56A1Q8NGH5 318 aa9.93□□□□□ -0.82
SCN10A-201ENST00000449082 DGCR14Q96DF8 476 aaKnown RBP9.93□□□□□ -0.82
SCN10A-201ENST00000449082 DIRAS2Q96HU8 199 aa9.93□□□□□ -0.82
SCN10A-201ENST00000449082 TEPSINQ96N21 525 aa9.93□□□□□ -0.82
SCN10A-201ENST00000449082 NODALQ96S42 347 aa9.93□□□□□ -0.82
SCN10A-201ENST00000449082 MGME1Q9BQP7 344 aa9.93□□□□□ -0.82
SCN10A-201ENST00000449082 WBP11Q9Y2W2 641 aaKnown RBP9.93□□□□□ -0.82
SCN10A-201ENST00000449082 WRBO00258 174 aa9.93□□□□□ -0.82
SCN10A-201ENST00000449082 GSRP00390 522 aa9.93□□□□□ -0.82
SCN10A-201ENST00000449082 GANABQ14697 944 aaKnown RBP9.93□□□□□ -0.82
SCN10A-201ENST00000449082 PIM3Q86V86 326 aa9.93□□□□□ -0.82
SCN10A-201ENST00000449082 IFT46Q9NQC8 304 aa9.93□□□□□ -0.82
SCN10A-201ENST00000449082 CTPS2Q9NRF8 586 aa9.93□□□□□ -0.82
SCN10A-201ENST00000449082 ZNF358Q9NW07 568 aa9.93□□□□□ -0.82
SCN10A-201ENST00000449082 PCDHGA2Q9Y5H1 932 aa9.93□□□□□ -0.82
SCN10A-201ENST00000449082 LCHNA4D1U4 455 aa9.93□□□□□ -0.82
SCN10A-201ENST00000449082 ZNF487B1APH4 448 aa9.93□□□□□ -0.82
SCN10A-201ENST00000449082 B4GALT2O60909 372 aa9.93□□□□□ -0.82
SCN10A-201ENST00000449082 TACSTD2P09758 323 aa9.93□□□□□ -0.82
SCN10A-201ENST00000449082 EBLN1P0CF75 366 aa9.93□□□□□ -0.82
SCN10A-201ENST00000449082 SEPHS1P49903 392 aa9.93□□□□□ -0.82
SCN10A-201ENST00000449082 OGDHQ02218 1023 aa9.93□□□□□ -0.82
SCN10A-201ENST00000449082 CRB2Q5IJ48 1285 aa9.93□□□□□ -0.82
SCN10A-201ENST00000449082 ADNP2Q6IQ32 1131 aa9.93□□□□□ -0.82
SCN10A-201ENST00000449082 SLC39A5Q6ZMH5 540 aa9.93□□□□□ -0.82
SCN10A-201ENST00000449082 ZNF572Q7Z3I7 529 aaPredicted RBP9.93□□□□□ -0.82
SCN10A-201ENST00000449082 CCDC54Q8NEL0 328 aa9.93□□□□□ -0.82
SCN10A-201ENST00000449082 GEMIN6Q8WXD5 167 aaKnown RBP9.93□□□□□ -0.82
SCN10A-201ENST00000449082 LGR4Q9BXB1 951 aa9.93□□□□□ -0.82
SCN10A-201ENST00000449082 ABCB9Q9NP78 766 aa9.93□□□□□ -0.82
SCN10A-201ENST00000449082 GALPQ9UBC7 116 aa9.93□□□□□ -0.82
SCN10A-201ENST00000449082 CYP8B1Q9UNU6 501 aa9.93□□□□□ -0.82
SCN10A-201ENST00000449082 RPL36Q9Y3U8 105 aaKnown RBP9.93□□□□□ -0.82
SCN10A-201ENST00000449082 PCDHB3Q9Y5E6 796 aa9.93□□□□□ -0.82
SCN10A-201ENST00000449082 H3BNX3 289 aa9.92□□□□□ -0.82
SCN10A-201ENST00000449082 ZNF623O75123 536 aa9.92□□□□□ -0.82
SCN10A-201ENST00000449082 OR4F3Q6IEY1 312 aa9.92□□□□□ -0.82
SCN10A-201ENST00000449082 SYVN1Q86TM6 617 aa9.92□□□□□ -0.82
SCN10A-201ENST00000449082 CILP2Q8IUL8 1156 aa9.92□□□□□ -0.82
SCN10A-201ENST00000449082 OR4F6Q8NGB9 312 aa9.92□□□□□ -0.82
SCN10A-201ENST00000449082 SETD6Q8TBK2 473 aa9.92□□□□□ -0.82
SCN10A-201ENST00000449082 KLHL6Q8WZ60 621 aa9.92□□□□□ -0.82
SCN10A-201ENST00000449082 CEP295NLQ96MC4 621 aa9.92□□□□□ -0.82
SCN10A-201ENST00000449082 GPR22Q99680 433 aa9.92□□□□□ -0.82
SCN10A-201ENST00000449082 LYARQ9NX58 379 aaKnown RBP9.92□□□□□ -0.82
SCN10A-201ENST00000449082 PDE10AQ9Y233 779 aa9.92□□□□□ -0.82
SCN10A-201ENST00000449082 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.92□□□□□ -0.82
SCN10A-201ENST00000449082 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.92□□□□□ -0.82
SCN10A-201ENST00000449082 VEGFDO43915 354 aa9.92□□□□□ -0.82
SCN10A-201ENST00000449082 LEFTY1O75610 366 aa9.92□□□□□ -0.82
SCN10A-201ENST00000449082 GSTM3P21266 225 aa9.92□□□□□ -0.82
SCN10A-201ENST00000449082 DCAF12L1Q5VU92 463 aa9.92□□□□□ -0.82
SCN10A-201ENST00000449082 OR10G2Q8NGC3 310 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms