RNA–Protein interactions for RNA: ENST00000448450.5

HTATSF1-203, Transcript of HIV-1 Tat specific factor 1, humanhuman

TSL 5

Gene HTATSF1, Length 1,014 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTATSF1-203ENST00000448450 CEP97Q8IW35 865 aa24■■□□□ 1.43
HTATSF1-203ENST00000448450 PPM1NQ8N819 430 aa24■■□□□ 1.43
HTATSF1-203ENST00000448450 CLEC18CQ8NCF0 446 aa24■■□□□ 1.43
HTATSF1-203ENST00000448450 FBF1Q8TES7 1133 aa24■■□□□ 1.43
HTATSF1-203ENST00000448450 ALKBH8Q96BT7 664 aaKnown RBP24■■□□□ 1.43
HTATSF1-203ENST00000448450 CCDC138Q96M89 665 aa24■■□□□ 1.43
HTATSF1-203ENST00000448450 SLC6A20Q9NP91 592 aa24■■□□□ 1.43
HTATSF1-203ENST00000448450 STOX2Q9P2F5 926 aaPredicted RBP24■■□□□ 1.43
HTATSF1-203ENST00000448450 KCND3Q9UK17 655 aa24■■□□□ 1.43
HTATSF1-203ENST00000448450 AP1M2Q9Y6Q5 423 aa24■■□□□ 1.43
HTATSF1-203ENST00000448450 SPTBN1Q01082 2364 aaKnown RBP24■■□□□ 1.43
HTATSF1-203ENST00000448450 A0A0J9YVX5 310 aa23.99■■□□□ 1.43
HTATSF1-203ENST00000448450 ZSCAN9O15535 394 aaPredicted RBP23.99■■□□□ 1.43
HTATSF1-203ENST00000448450 C1QAP02745 245 aa23.99■■□□□ 1.43
HTATSF1-203ENST00000448450 RORAP35398 523 aa23.99■■□□□ 1.43
HTATSF1-203ENST00000448450 SP140Q13342 867 aa23.99■■□□□ 1.43
HTATSF1-203ENST00000448450 KBTBD12Q3ZCT8 623 aa23.99■■□□□ 1.43
HTATSF1-203ENST00000448450 ICE2Q659A1 982 aa23.99■■□□□ 1.43
HTATSF1-203ENST00000448450 TLDC1Q6P9B6 456 aa23.99■■□□□ 1.43
HTATSF1-203ENST00000448450 LRRC56Q8IYG6 542 aaPredicted RBP23.99■■□□□ 1.43
HTATSF1-203ENST00000448450 FAM26EQ8N5C1 309 aa23.99■■□□□ 1.43
HTATSF1-203ENST00000448450 CEP112Q8N8E3 955 aa23.99■■□□□ 1.43
HTATSF1-203ENST00000448450 LRFN5Q96NI6 719 aa23.99■■□□□ 1.43
HTATSF1-203ENST00000448450 CPNE1Q99829 537 aa23.99■■□□□ 1.43
HTATSF1-203ENST00000448450 SELENOSQ9BQE4 189 aa23.99■■□□□ 1.43
HTATSF1-203ENST00000448450 MCMBPQ9BTE3 642 aa23.99■■□□□ 1.43
HTATSF1-203ENST00000448450 ATG10Q9H0Y0 220 aa23.99■■□□□ 1.43
HTATSF1-203ENST00000448450 CAB39LQ9H9S4 337 aa23.99■■□□□ 1.43
HTATSF1-203ENST00000448450 IKZF3Q9UKT9 509 aa23.99■■□□□ 1.43
HTATSF1-203ENST00000448450 HBQ1P09105 142 aa23.98■■□□□ 1.43
HTATSF1-203ENST00000448450 HIST1H2AGP0C0S8 130 aaPredicted RBP23.98■■□□□ 1.43
HTATSF1-203ENST00000448450 HIST1H2ADP20671 130 aa23.98■■□□□ 1.43
HTATSF1-203ENST00000448450 SLC12A2P55011 1212 aa23.98■■□□□ 1.43
HTATSF1-203ENST00000448450 RPS18P62269 152 aaKnown RBP23.98■■□□□ 1.43
HTATSF1-203ENST00000448450 RPS15P62841 145 aaKnown RBP23.98■■□□□ 1.43
HTATSF1-203ENST00000448450 PRDX1Q06830 199 aaKnown RBP23.98■■□□□ 1.43
HTATSF1-203ENST00000448450 KLRB1Q12918 225 aa23.98■■□□□ 1.43
HTATSF1-203ENST00000448450 ERV3-1Q14264 604 aa23.98■■□□□ 1.43
HTATSF1-203ENST00000448450 GLE1Q53GS7 698 aaKnown RBP23.98■■□□□ 1.43
HTATSF1-203ENST00000448450 HIST1H2AHQ96KK5 128 aa23.98■■□□□ 1.43
HTATSF1-203ENST00000448450 HIST1H2AJQ99878 128 aa23.98■■□□□ 1.43
HTATSF1-203ENST00000448450 H2AFJQ9BTM1 129 aa23.98■■□□□ 1.43
HTATSF1-203ENST00000448450 DHCR7Q9UBM7 475 aaKnown RBP23.98■■□□□ 1.43
HTATSF1-203ENST00000448450 MTRF1LQ9UGC7 380 aaKnown RBP23.98■■□□□ 1.43
HTATSF1-203ENST00000448450 MAN2B2Q9Y2E5 1009 aa23.98■■□□□ 1.43
HTATSF1-203ENST00000448450 PABPN1LA6NDY0 278 aaKnown RBP23.97■■□□□ 1.43
HTATSF1-203ENST00000448450 C21orf140B9A014 251 aa23.97■■□□□ 1.43
HTATSF1-203ENST00000448450 FAM155BO75949 473 aa23.97■■□□□ 1.43
HTATSF1-203ENST00000448450 ZNF37AP17032 561 aaPredicted RBP23.97■■□□□ 1.43
HTATSF1-203ENST00000448450 STX2P32856 288 aa23.97■■□□□ 1.43
HTATSF1-203ENST00000448450 GP5P40197 560 aa23.97■■□□□ 1.43
HTATSF1-203ENST00000448450 VSX2P58304 361 aaPredicted RBP23.97■■□□□ 1.43
HTATSF1-203ENST00000448450 USP10Q14694 798 aaKnown RBP23.97■■□□□ 1.43
HTATSF1-203ENST00000448450 EFTUD2Q15029 972 aaKnown RBP eCLIP23.97■■□□□ 1.43
HTATSF1-203ENST00000448450 FRMPD2BQ6IN97 320 aa23.97■■□□□ 1.43
HTATSF1-203ENST00000448450 FBXO42Q6P3S6 717 aa23.97■■□□□ 1.43
HTATSF1-203ENST00000448450 AGTRAPQ6RW13 159 aa23.97■■□□□ 1.43
HTATSF1-203ENST00000448450 NKAPQ8N5F7 415 aaKnown RBP23.97■■□□□ 1.43
HTATSF1-203ENST00000448450 PDLIM5Q96HC4 596 aaKnown RBP23.97■■□□□ 1.43
HTATSF1-203ENST00000448450 RBBP8Q99708 897 aa23.97■■□□□ 1.43
HTATSF1-203ENST00000448450 NDC1Q9BTX1 674 aa23.97■■□□□ 1.43
HTATSF1-203ENST00000448450 TRIM54Q9BYV2 358 aa23.97■■□□□ 1.43
HTATSF1-203ENST00000448450 ACTL8Q9H568 366 aa23.97■■□□□ 1.43
HTATSF1-203ENST00000448450 GPAMQ9HCL2 828 aa23.97■■□□□ 1.43
HTATSF1-203ENST00000448450 TXLNGQ9NUQ3 528 aa23.97■■□□□ 1.43
HTATSF1-203ENST00000448450 ARL15Q9NXU5 204 aa23.97■■□□□ 1.43
HTATSF1-203ENST00000448450 UTP6Q9NYH9 597 aaKnown RBP23.97■■□□□ 1.43
HTATSF1-203ENST00000448450 HEATR5BQ9P2D3 2071 aa23.97■■□□□ 1.43
HTATSF1-203ENST00000448450 PLAAQ9Y263 795 aa23.97■■□□□ 1.43
HTATSF1-203ENST00000448450 FARSAQ9Y285 508 aaKnown RBP23.97■■□□□ 1.43
HTATSF1-203ENST00000448450 TP53TG5Q9Y2B4 290 aa23.97■■□□□ 1.43
HTATSF1-203ENST00000448450 PCDHGA6Q9Y5G7 932 aa23.97■■□□□ 1.43
HTATSF1-203ENST00000448450 KLK4Q9Y5K2 254 aa23.97■■□□□ 1.43
HTATSF1-203ENST00000448450 LOC105369274A0A096LPK9 316 aa23.96■■□□□ 1.43
HTATSF1-203ENST00000448450 IGKV1-8A0A0C4DH67 115 aa23.96■■□□□ 1.43
HTATSF1-203ENST00000448450 LOC102723532A0A0G2JNH3 316 aa23.96■■□□□ 1.43
HTATSF1-203ENST00000448450 CDC7O00311 574 aa23.96■■□□□ 1.43
HTATSF1-203ENST00000448450 CREG1O75629 220 aa23.96■■□□□ 1.43
HTATSF1-203ENST00000448450 CCNDBP1O95273 360 aa23.96■■□□□ 1.43
HTATSF1-203ENST00000448450 GUCA1CO95843 209 aa23.96■■□□□ 1.43
HTATSF1-203ENST00000448450 EIF2S1P05198 315 aaKnown RBP23.96■■□□□ 1.43
HTATSF1-203ENST00000448450 AGXTP21549 392 aa23.96■■□□□ 1.43
HTATSF1-203ENST00000448450 ALAS2P22557 587 aa23.96■■□□□ 1.43
HTATSF1-203ENST00000448450 POU4F1Q01851 419 aa23.96■■□□□ 1.43
HTATSF1-203ENST00000448450 NAE1Q13564 534 aa23.96■■□□□ 1.43
HTATSF1-203ENST00000448450 RHBDD2Q6NTF9 364 aa23.96■■□□□ 1.43
HTATSF1-203ENST00000448450 ZNF517Q6ZMY9 492 aaPredicted RBP23.96■■□□□ 1.43
HTATSF1-203ENST00000448450 ADCK2Q7Z695 626 aa23.96■■□□□ 1.43
HTATSF1-203ENST00000448450 ATCAYQ86WG3 371 aa23.96■■□□□ 1.43
HTATSF1-203ENST00000448450 LURAP1LQ8IV03 231 aa23.96■■□□□ 1.43
HTATSF1-203ENST00000448450 OR4N4Q8N0Y3 316 aa23.96■■□□□ 1.43
HTATSF1-203ENST00000448450 ANKRD49Q8WVL7 239 aa23.96■■□□□ 1.43
HTATSF1-203ENST00000448450 MRRFQ96E11 262 aaKnown RBP23.96■■□□□ 1.43
HTATSF1-203ENST00000448450 PLCD4Q9BRC7 762 aa23.96■■□□□ 1.43
HTATSF1-203ENST00000448450 GPR87Q9BY21 358 aa23.96■■□□□ 1.43
HTATSF1-203ENST00000448450 UNKQ9C0B0 810 aaKnown RBP23.96■■□□□ 1.43
HTATSF1-203ENST00000448450 CCDC177Q9NQR7 707 aaPredicted RBP23.96■■□□□ 1.43
HTATSF1-203ENST00000448450 KCNMB2Q9Y691 235 aa23.96■■□□□ 1.43
HTATSF1-203ENST00000448450 SPENQ96T58 3664 aaKnown RBP23.96■■□□□ 1.43
HTATSF1-203ENST00000448450 CDC14CA4D256 554 aa23.95■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms