RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 ZNF805Q5CZA5 627 aa14.34□□□□□ -0.11
SF1-211ENST00000448404 BRAT1Q6PJG6 821 aa14.34□□□□□ -0.11
SF1-211ENST00000448404 B3GNT6Q6ZMB0 384 aa14.34□□□□□ -0.11
SF1-211ENST00000448404 CLVS1Q8IUQ0 354 aaPredicted RBP14.34□□□□□ -0.11
SF1-211ENST00000448404 MMAAQ8IVH4 418 aaKnown RBP14.34□□□□□ -0.11
SF1-211ENST00000448404 SYTL1Q8IYJ3 562 aa14.34□□□□□ -0.11
SF1-211ENST00000448404 OR4K1Q8NGD4 311 aa14.34□□□□□ -0.11
SF1-211ENST00000448404 ARRDC3Q96B67 414 aa14.34□□□□□ -0.11
SF1-211ENST00000448404 PANX1Q96RD7 426 aa14.34□□□□□ -0.11
SF1-211ENST00000448404 SNX6Q9UNH7 406 aa14.34□□□□□ -0.11
SF1-211ENST00000448404 ABCG2Q9UNQ0 655 aa14.34□□□□□ -0.11
SF1-211ENST00000448404 PRR23AA6NEV1 266 aa14.33□□□□□ -0.12
SF1-211ENST00000448404 RECQL5O94762 991 aaPredicted RBP14.33□□□□□ -0.12
SF1-211ENST00000448404 SOD1P00441 154 aa14.33□□□□□ -0.12
SF1-211ENST00000448404 STATHP02808 62 aa14.33□□□□□ -0.12
SF1-211ENST00000448404 IL6P05231 212 aa14.33□□□□□ -0.12
SF1-211ENST00000448404 C8GP07360 202 aa14.33□□□□□ -0.12
SF1-211ENST00000448404 CDK4P11802 303 aa14.33□□□□□ -0.12
SF1-211ENST00000448404 EN2P19622 333 aaPredicted RBP14.33□□□□□ -0.12
SF1-211ENST00000448404 AGXTP21549 392 aa14.33□□□□□ -0.12
SF1-211ENST00000448404 FUT4P22083 530 aa14.33□□□□□ -0.12
SF1-211ENST00000448404 MMP12P39900 470 aa14.33□□□□□ -0.12
SF1-211ENST00000448404 MRPL19P49406 292 aaKnown RBP14.33□□□□□ -0.12
SF1-211ENST00000448404 PMS2P3Q13401 168 aa14.33□□□□□ -0.12
SF1-211ENST00000448404 FAM98BQ52LJ0 330 aaKnown RBP14.33□□□□□ -0.12
SF1-211ENST00000448404 TECPR1Q7Z6L1 1165 aa14.33□□□□□ -0.12
SF1-211ENST00000448404 PROSER1Q86XN7 944 aa14.33□□□□□ -0.12
SF1-211ENST00000448404 PLA2G15Q8NCC3 412 aa14.33□□□□□ -0.12
SF1-211ENST00000448404 CPPED1Q9BRF8 314 aaPredicted RBP14.33□□□□□ -0.12
SF1-211ENST00000448404 ADNPQ9H2P0 1102 aa14.33□□□□□ -0.12
SF1-211ENST00000448404 SGK2Q9HBY8 427 aa14.33□□□□□ -0.12
SF1-211ENST00000448404 PTTG2Q9NZH5 202 aa14.33□□□□□ -0.12
SF1-211ENST00000448404 TDRKHQ9Y2W6 561 aaKnown RBP14.33□□□□□ -0.12
SF1-211ENST00000448404 TRBV5-3A0A0A0MS03 114 aa14.33□□□□□ -0.12
SF1-211ENST00000448404 GMNNO75496 209 aa14.33□□□□□ -0.12
SF1-211ENST00000448404 RAP2AP10114 183 aa14.33□□□□□ -0.12
SF1-211ENST00000448404 ADH5P11766 374 aa14.33□□□□□ -0.12
SF1-211ENST00000448404 COX7A2P14406 83 aa14.33□□□□□ -0.12
SF1-211ENST00000448404 MYF6P23409 242 aa14.33□□□□□ -0.12
SF1-211ENST00000448404 CAPGP40121 348 aa14.33□□□□□ -0.12
SF1-211ENST00000448404 CLDN8P56748 225 aa14.33□□□□□ -0.12
SF1-211ENST00000448404 GTF2H3Q13889 308 aa14.33□□□□□ -0.12
SF1-211ENST00000448404 FNDC3BQ53EP0 1204 aaKnown RBP14.33□□□□□ -0.12
SF1-211ENST00000448404 RAET1GQ6H3X3 334 aa14.33□□□□□ -0.12
SF1-211ENST00000448404 PDE12Q6L8Q7 609 aaKnown RBP14.33□□□□□ -0.12
SF1-211ENST00000448404 ANGPTL8Q6UXH0 198 aa14.33□□□□□ -0.12
SF1-211ENST00000448404 LPCAT2Q7L5N7 544 aa14.33□□□□□ -0.12
SF1-211ENST00000448404 GPR180Q86V85 440 aa14.33□□□□□ -0.12
SF1-211ENST00000448404 MICU2Q8IYU8 434 aa14.33□□□□□ -0.12
SF1-211ENST00000448404 PAPD5Q8NDF8 572 aaKnown RBP14.33□□□□□ -0.12
SF1-211ENST00000448404 OR8J3Q8NGG0 315 aa14.33□□□□□ -0.12
SF1-211ENST00000448404 KLK6Q92876 244 aa14.33□□□□□ -0.12
SF1-211ENST00000448404 AMBRA1Q9C0C7 1298 aa14.33□□□□□ -0.12
SF1-211ENST00000448404 CEP44Q9C0F1 390 aa14.33□□□□□ -0.12
SF1-211ENST00000448404 THG1LQ9NWX6 298 aaKnown RBP14.33□□□□□ -0.12
SF1-211ENST00000448404 CFAP99D6REC4 459 aa14.32□□□□□ -0.12
SF1-211ENST00000448404 E2F6O75461 281 aa14.32□□□□□ -0.12
SF1-211ENST00000448404 TGFB1P01137 390 aa14.32□□□□□ -0.12
SF1-211ENST00000448404 CISD3P0C7P0 127 aa14.32□□□□□ -0.12
SF1-211ENST00000448404 CBSLP0DN79 551 aa14.32□□□□□ -0.12
SF1-211ENST00000448404 ENGP17813 658 aa14.32□□□□□ -0.12
SF1-211ENST00000448404 CBSP35520 551 aa14.32□□□□□ -0.12
SF1-211ENST00000448404 RPS13P62277 151 aaKnown RBP14.32□□□□□ -0.12
SF1-211ENST00000448404 SFSWAPQ12872 951 aaKnown RBP14.32□□□□□ -0.12
SF1-211ENST00000448404 MEP1AQ16819 746 aa14.32□□□□□ -0.12
SF1-211ENST00000448404 ZNF852Q6ZMS4 543 aa14.32□□□□□ -0.12
SF1-211ENST00000448404 LRRC70Q7Z2Q7 622 aa14.32□□□□□ -0.12
SF1-211ENST00000448404 TRMT11Q7Z4G4 463 aaKnown RBP14.32□□□□□ -0.12
SF1-211ENST00000448404 NECAB2Q7Z6G3 386 aa14.32□□□□□ -0.12
SF1-211ENST00000448404 BDH2Q9BUT1 245 aa14.32□□□□□ -0.12
SF1-211ENST00000448404 OR51B5Q9H339 312 aa14.32□□□□□ -0.12
SF1-211ENST00000448404 ACSL6Q9UKU0 697 aa14.32□□□□□ -0.12
SF1-211ENST00000448404 MYO1GB0I1T2 1018 aa14.32□□□□□ -0.12
SF1-211ENST00000448404 G3V2T6 193 aa14.32□□□□□ -0.12
SF1-211ENST00000448404 NPC1O15118 1278 aa14.32□□□□□ -0.12
SF1-211ENST00000448404 HS6ST1O60243 411 aa14.32□□□□□ -0.12
SF1-211ENST00000448404 ALPLP05186 524 aa14.32□□□□□ -0.12
SF1-211ENST00000448404 CYP2A6P11509 494 aaPredicted RBP14.32□□□□□ -0.12
SF1-211ENST00000448404 FSHRP23945 695 aa14.32□□□□□ -0.12
SF1-211ENST00000448404 EPHA2P29317 976 aa14.32□□□□□ -0.12
SF1-211ENST00000448404 WNT3P56703 355 aa14.32□□□□□ -0.12
SF1-211ENST00000448404 FXNQ16595 210 aa14.32□□□□□ -0.12
SF1-211ENST00000448404 FAM83HQ6ZRV2 1179 aaPredicted RBP14.32□□□□□ -0.12
SF1-211ENST00000448404 HUS1BQ8NHY5 278 aa14.32□□□□□ -0.12
SF1-211ENST00000448404 ZNF480Q8WV37 535 aa14.32□□□□□ -0.12
SF1-211ENST00000448404 OSCP1Q8WVF1 389 aa14.32□□□□□ -0.12
SF1-211ENST00000448404 RAD9AQ99638 391 aa14.32□□□□□ -0.12
SF1-211ENST00000448404 RHNO1Q9BSD3 238 aa14.32□□□□□ -0.12
SF1-211ENST00000448404 POLR1BQ9H9Y6 1135 aa14.32□□□□□ -0.12
SF1-211ENST00000448404 ZNF451Q9Y4E5 1061 aa14.32□□□□□ -0.12
SF1-211ENST00000448404 ZNF106Q9H2Y7 1883 aaKnown RBP14.31□□□□□ -0.12
SF1-211ENST00000448404 FPGTO14772 594 aa14.31□□□□□ -0.12
SF1-211ENST00000448404 SLCO2B1O94956 709 aa14.31□□□□□ -0.12
SF1-211ENST00000448404 ALBP02768 609 aa14.31□□□□□ -0.12
SF1-211ENST00000448404 OPN1SWP03999 348 aa14.31□□□□□ -0.12
SF1-211ENST00000448404 KIR3DL1P43629 444 aa14.31□□□□□ -0.12
SF1-211ENST00000448404 GZMMP51124 257 aa14.31□□□□□ -0.12
SF1-211ENST00000448404 EPHA5P54756 1037 aa14.31□□□□□ -0.12
SF1-211ENST00000448404 NAA20P61599 178 aa14.31□□□□□ -0.12
SF1-211ENST00000448404 CBX3Q13185 183 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms