RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 BIRC7Q96CA5 298 aa16.87■□□□□ 0.29
SMC6-206ENST00000446852 IL17FQ96PD4 163 aa16.87■□□□□ 0.29
SMC6-206ENST00000446852 THUMPD3Q9BV44 507 aaKnown RBP16.87■□□□□ 0.29
SMC6-206ENST00000446852 SLC6A17Q9H1V8 727 aa16.87■□□□□ 0.29
SMC6-206ENST00000446852 BRF2Q9HAW0 419 aa16.87■□□□□ 0.29
SMC6-206ENST00000446852 ITM2CQ9NQX7 267 aa16.87■□□□□ 0.29
SMC6-206ENST00000446852 SCOCQ9UIL1 159 aa16.87■□□□□ 0.29
SMC6-206ENST00000446852 MAGEL2Q9UJ55 1249 aa16.87■□□□□ 0.29
SMC6-206ENST00000446852 RAB26Q9ULW5 256 aa16.87■□□□□ 0.29
SMC6-206ENST00000446852 PLAGL1Q9UM63 463 aa16.87■□□□□ 0.29
SMC6-206ENST00000446852 ASF1AQ9Y294 204 aa16.87■□□□□ 0.29
SMC6-206ENST00000446852 C7orf72A4D263 438 aa16.86■□□□□ 0.29
SMC6-206ENST00000446852 CKMT2P17540 419 aa16.86■□□□□ 0.29
SMC6-206ENST00000446852 CDKN2CP42773 168 aa16.86■□□□□ 0.29
SMC6-206ENST00000446852 PNLIPRP1P54315 467 aa16.86■□□□□ 0.29
SMC6-206ENST00000446852 AGERQ15109 404 aa16.86■□□□□ 0.29
SMC6-206ENST00000446852 PDK3Q15120 406 aa16.86■□□□□ 0.29
SMC6-206ENST00000446852 LRIF1Q5T3J3 769 aa16.86■□□□□ 0.29
SMC6-206ENST00000446852 SYT12Q8IV01 421 aa16.86■□□□□ 0.29
SMC6-206ENST00000446852 TRPV3Q8NET8 790 aa16.86■□□□□ 0.29
SMC6-206ENST00000446852 AURKBQ96GD4 344 aaPredicted RBP16.86■□□□□ 0.29
SMC6-206ENST00000446852 RIPOR3Q96MK2 946 aa16.86■□□□□ 0.29
SMC6-206ENST00000446852 NRTNQ99748 197 aa16.86■□□□□ 0.29
SMC6-206ENST00000446852 TEX101Q9BY14 249 aa16.86■□□□□ 0.29
SMC6-206ENST00000446852 KCNH6Q9H252 994 aa16.86■□□□□ 0.29
SMC6-206ENST00000446852 VCXQ9H320 206 aa16.86■□□□□ 0.29
SMC6-206ENST00000446852 V9GYQ6 96 aa16.86■□□□□ 0.29
SMC6-206ENST00000446852 COL4A2P08572 1712 aa16.86■□□□□ 0.29
SMC6-206ENST00000446852 PAK4O96013 591 aaPredicted RBP16.86■□□□□ 0.29
SMC6-206ENST00000446852 HSD3B1P14060 373 aa16.86■□□□□ 0.29
SMC6-206ENST00000446852 GGT1P19440 569 aa16.86■□□□□ 0.29
SMC6-206ENST00000446852 HSD3B2P26439 372 aa16.86■□□□□ 0.29
SMC6-206ENST00000446852 RAE1P78406 368 aaKnown RBP16.86■□□□□ 0.29
SMC6-206ENST00000446852 UGT8Q16880 541 aa16.86■□□□□ 0.29
SMC6-206ENST00000446852 C6orf52Q5T4I8 152 aa16.86■□□□□ 0.29
SMC6-206ENST00000446852 ZNF776Q68DI1 518 aaPredicted RBP16.86■□□□□ 0.29
SMC6-206ENST00000446852 OR4F3Q6IEY1 312 aa16.86■□□□□ 0.29
SMC6-206ENST00000446852 PHACTR4Q8IZ21 702 aa16.86■□□□□ 0.29
SMC6-206ENST00000446852 C10orf111Q8N326 155 aa16.86■□□□□ 0.29
SMC6-206ENST00000446852 OXR1Q8N573 874 aa16.86■□□□□ 0.29
SMC6-206ENST00000446852 ZNF548Q8NEK5 533 aaPredicted RBP16.86■□□□□ 0.29
SMC6-206ENST00000446852 OR2T12Q8NG77 320 aa16.86■□□□□ 0.29
SMC6-206ENST00000446852 WDR34Q96EX3 536 aa16.86■□□□□ 0.29
SMC6-206ENST00000446852 ANAPC2Q9UJX6 822 aa16.86■□□□□ 0.29
SMC6-206ENST00000446852 PCDHGB4Q9UN71 923 aa16.86■□□□□ 0.29
SMC6-206ENST00000446852 RUVBL1Q9Y265 456 aaKnown RBP16.86■□□□□ 0.29
SMC6-206ENST00000446852 PCDHGB5Q9Y5G0 923 aa16.86■□□□□ 0.29
SMC6-206ENST00000446852 A0A096LPI6 279 aa16.85■□□□□ 0.29
SMC6-206ENST00000446852 KANSL1LA0AUZ9 987 aa16.85■□□□□ 0.29
SMC6-206ENST00000446852 PRR23AA6NEV1 266 aa16.85■□□□□ 0.29
SMC6-206ENST00000446852 ERN1O75460 977 aaKnown RBP16.85■□□□□ 0.29
SMC6-206ENST00000446852 GSNP06396 782 aa16.85■□□□□ 0.29
SMC6-206ENST00000446852 PRKCQQ04759 706 aa16.85■□□□□ 0.29
SMC6-206ENST00000446852 ACSM2AQ08AH3 577 aa16.85■□□□□ 0.29
SMC6-206ENST00000446852 RPA4Q13156 261 aa16.85■□□□□ 0.29
SMC6-206ENST00000446852 TMEM196Q5HYL7 178 aa16.85■□□□□ 0.29
SMC6-206ENST00000446852 ACSM2BQ68CK6 577 aa16.85■□□□□ 0.29
SMC6-206ENST00000446852 MED27Q6P2C8 311 aa16.85■□□□□ 0.29
SMC6-206ENST00000446852 MARVELD2Q8N4S9 558 aa16.85■□□□□ 0.29
SMC6-206ENST00000446852 C1orf52Q8N6N3 182 aaKnown RBP16.85■□□□□ 0.29
SMC6-206ENST00000446852 OR7A2PQ8NGA2 310 aa16.85■□□□□ 0.29
SMC6-206ENST00000446852 NSMCE2Q96MF7 247 aa16.85■□□□□ 0.29
SMC6-206ENST00000446852 CCDC115Q96NT0 180 aa16.85■□□□□ 0.29
SMC6-206ENST00000446852 SPNS1Q9H2V7 528 aa16.85■□□□□ 0.29
SMC6-206ENST00000446852 GEMIN8Q9NWZ8 242 aaKnown RBP16.85■□□□□ 0.29
SMC6-206ENST00000446852 UBAP1Q9NZ09 502 aa16.85■□□□□ 0.29
SMC6-206ENST00000446852 PRPS1L1P21108 318 aa16.85■□□□□ 0.29
SMC6-206ENST00000446852 RPS13P62277 151 aaKnown RBP16.85■□□□□ 0.29
SMC6-206ENST00000446852 MTAPQ13126 283 aa16.85■□□□□ 0.29
SMC6-206ENST00000446852 SLBPQ14493 270 aaKnown RBP eCLIP16.85■□□□□ 0.29
SMC6-206ENST00000446852 OR52E8Q6IFG1 317 aa16.85■□□□□ 0.29
SMC6-206ENST00000446852 UGT2A3Q6UWM9 527 aa16.85■□□□□ 0.29
SMC6-206ENST00000446852 GPR180Q86V85 440 aa16.85■□□□□ 0.29
SMC6-206ENST00000446852 EPHX4Q8IUS5 362 aa16.85■□□□□ 0.29
SMC6-206ENST00000446852 TP53I13Q8NBR0 393 aaPredicted RBP16.85■□□□□ 0.29
SMC6-206ENST00000446852 PAPD5Q8NDF8 572 aaKnown RBP16.85■□□□□ 0.29
SMC6-206ENST00000446852 ITCHQ96J02 903 aa16.85■□□□□ 0.29
SMC6-206ENST00000446852 ZNF597Q96LX8 424 aa16.85■□□□□ 0.29
SMC6-206ENST00000446852 CPPED1Q9BRF8 314 aaPredicted RBP16.85■□□□□ 0.29
SMC6-206ENST00000446852 WDR26Q9H7D7 661 aa16.85■□□□□ 0.29
SMC6-206ENST00000446852 CCDC177Q9NQR7 707 aaPredicted RBP16.85■□□□□ 0.29
SMC6-206ENST00000446852 CLDND1Q9NY35 253 aa16.85■□□□□ 0.29
SMC6-206ENST00000446852 DYRK1BQ9Y463 629 aa16.85■□□□□ 0.29
SMC6-206ENST00000446852 CFAP20Q9Y6A4 193 aaKnown RBP16.85■□□□□ 0.29
SMC6-206ENST00000446852 PRUNE2Q8WUY3 3088 aa16.84■□□□□ 0.29
SMC6-206ENST00000446852 SOCS2O14508 198 aa16.84■□□□□ 0.29
SMC6-206ENST00000446852 FUCA1P04066 466 aa16.84■□□□□ 0.29
SMC6-206ENST00000446852 UMPSP11172 480 aa16.84■□□□□ 0.29
SMC6-206ENST00000446852 FASP25445 335 aa16.84■□□□□ 0.29
SMC6-206ENST00000446852 TRIM23P36406 574 aa16.84■□□□□ 0.29
SMC6-206ENST00000446852 LTBRP36941 435 aa16.84■□□□□ 0.29
SMC6-206ENST00000446852 KIR3DL1P43629 444 aa16.84■□□□□ 0.29
SMC6-206ENST00000446852 MEF2AQ02078 507 aaPredicted RBP16.84■□□□□ 0.29
SMC6-206ENST00000446852 HTR4Q13639 388 aa16.84■□□□□ 0.29
SMC6-206ENST00000446852 METRNLQ641Q3 311 aa16.84■□□□□ 0.29
SMC6-206ENST00000446852 ATG9BQ674R7 924 aa16.84■□□□□ 0.29
SMC6-206ENST00000446852 C2orf73Q8N5S3 287 aaPredicted RBP16.84■□□□□ 0.29
SMC6-206ENST00000446852 TFGQ92734 400 aaPredicted RBP16.84■□□□□ 0.29
SMC6-206ENST00000446852 SEPHS2Q99611 448 aa16.84■□□□□ 0.29
SMC6-206ENST00000446852 OSBPL6Q9BZF3 934 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms