RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 RNF148Q8N7C7 305 aa8.33□□□□□ -1.08
PTPN3-204ENST00000446349 VANGL1Q8TAA9 524 aaPredicted RBP8.33□□□□□ -1.08
PTPN3-204ENST00000446349 NDRG1Q92597 394 aaKnown RBP8.33□□□□□ -1.08
PTPN3-204ENST00000446349 MFSD3Q96ES6 412 aa8.33□□□□□ -1.08
PTPN3-204ENST00000446349 KCNC2Q96PR1 638 aa8.33□□□□□ -1.08
PTPN3-204ENST00000446349 C16orf70Q9BSU1 422 aa8.33□□□□□ -1.08
PTPN3-204ENST00000446349 EIF2B4Q9UI10 523 aaKnown RBP8.33□□□□□ -1.08
PTPN3-204ENST00000446349 LIPT1Q9Y234 373 aa8.33□□□□□ -1.08
PTPN3-204ENST00000446349 HEPACAM2A8MVW5 462 aa8.33□□□□□ -1.08
PTPN3-204ENST00000446349 ZNF879B4DU55 563 aa8.33□□□□□ -1.08
PTPN3-204ENST00000446349 ANPEPP15144 967 aa8.33□□□□□ -1.08
PTPN3-204ENST00000446349 ZNF37AP17032 561 aaPredicted RBP8.33□□□□□ -1.08
PTPN3-204ENST00000446349 CHRNB2P17787 502 aa8.33□□□□□ -1.08
PTPN3-204ENST00000446349 CST5P28325 142 aaPredicted RBP8.33□□□□□ -1.08
PTPN3-204ENST00000446349 CYP4F3Q08477 520 aa8.33□□□□□ -1.08
PTPN3-204ENST00000446349 SLC9A4Q6AI14 798 aa8.33□□□□□ -1.08
PTPN3-204ENST00000446349 NXPE1Q8N323 547 aa8.33□□□□□ -1.08
PTPN3-204ENST00000446349 TMCO6Q96DC7 493 aa8.33□□□□□ -1.08
PTPN3-204ENST00000446349 TRPV5Q9NQA5 729 aa8.33□□□□□ -1.08
PTPN3-204ENST00000446349 IFT46Q9NQC8 304 aa8.33□□□□□ -1.08
PTPN3-204ENST00000446349 MUSKO15146 869 aa8.33□□□□□ -1.08
PTPN3-204ENST00000446349 OAZ2O95190 189 aa8.33□□□□□ -1.08
PTPN3-204ENST00000446349 SHBGP04278 402 aa8.33□□□□□ -1.08
PTPN3-204ENST00000446349 EEFSECP57772 596 aaKnown RBP8.33□□□□□ -1.08
PTPN3-204ENST00000446349 TRIM25Q14258 630 aaKnown RBP8.33□□□□□ -1.08
PTPN3-204ENST00000446349 MLIPQ5VWP3 458 aa8.33□□□□□ -1.08
PTPN3-204ENST00000446349 LRRC66Q68CR7 880 aa8.33□□□□□ -1.08
PTPN3-204ENST00000446349 LYSMD3Q7Z3D4 306 aa8.33□□□□□ -1.08
PTPN3-204ENST00000446349 THOC6Q86W42 341 aaKnown RBP8.33□□□□□ -1.08
PTPN3-204ENST00000446349 LRRC57Q8N9N7 239 aa8.33□□□□□ -1.08
PTPN3-204ENST00000446349 PYDC1Q8WXC3 89 aa8.33□□□□□ -1.08
PTPN3-204ENST00000446349 PPM1MQ96MI6 270 aa8.33□□□□□ -1.08
PTPN3-204ENST00000446349 RANBP9Q96S59 729 aa8.33□□□□□ -1.08
PTPN3-204ENST00000446349 TXNRD2Q9NNW7 524 aa8.33□□□□□ -1.08
PTPN3-204ENST00000446349 TMEM189-UBE2V1I3L0A0 370 aa8.32□□□□□ -1.08
PTPN3-204ENST00000446349 EPHB6O15197 1021 aa8.32□□□□□ -1.08
PTPN3-204ENST00000446349 RAP2AP10114 183 aa8.32□□□□□ -1.08
PTPN3-204ENST00000446349 RPL5P46777 297 aaKnown RBP8.32□□□□□ -1.08
PTPN3-204ENST00000446349 NRF1Q16656 503 aa8.32□□□□□ -1.08
PTPN3-204ENST00000446349 SLC36A3Q495N2 470 aa8.32□□□□□ -1.08
PTPN3-204ENST00000446349 ATP6V1C2Q8NEY4 427 aa8.32□□□□□ -1.08
PTPN3-204ENST00000446349 C1orf216Q8TAB5 229 aa8.32□□□□□ -1.08
PTPN3-204ENST00000446349 NAT6Q93015 286 aa8.32□□□□□ -1.08
PTPN3-204ENST00000446349 MR1Q95460 341 aa8.32□□□□□ -1.08
PTPN3-204ENST00000446349 CDH22Q9UJ99 828 aa8.32□□□□□ -1.08
PTPN3-204ENST00000446349 GPR34Q9UPC5 381 aa8.32□□□□□ -1.08
PTPN3-204ENST00000446349 ITGB4P16144 1822 aa8.32□□□□□ -1.08
PTPN3-204ENST00000446349 PPM1BO75688 479 aa8.32□□□□□ -1.08
PTPN3-204ENST00000446349 NFATC2Q13469 925 aa8.32□□□□□ -1.08
PTPN3-204ENST00000446349 PLEKHG6Q3KR16 790 aa8.32□□□□□ -1.08
PTPN3-204ENST00000446349 LAPTM4BQ86VI4 370 aa8.32□□□□□ -1.08
PTPN3-204ENST00000446349 OR4K14Q8NGD5 310 aa8.32□□□□□ -1.08
PTPN3-204ENST00000446349 C15orf41Q9Y2V0 281 aa8.32□□□□□ -1.08
PTPN3-204ENST00000446349 ARL5AQ9Y689 179 aa8.32□□□□□ -1.08
PTPN3-204ENST00000446349 MMP20O60882 483 aa8.32□□□□□ -1.08
PTPN3-204ENST00000446349 OR4F21O95013 312 aa8.32□□□□□ -1.08
PTPN3-204ENST00000446349 FBLP22087 321 aaKnown RBP8.32□□□□□ -1.08
PTPN3-204ENST00000446349 MAPK3P27361 379 aaPredicted RBP8.32□□□□□ -1.08
PTPN3-204ENST00000446349 BMP8BP34820 402 aa8.32□□□□□ -1.08
PTPN3-204ENST00000446349 ZNF84P51523 738 aa8.32□□□□□ -1.08
PTPN3-204ENST00000446349 BMP8AQ7Z5Y6 402 aa8.32□□□□□ -1.08
PTPN3-204ENST00000446349 MRPL10Q7Z7H8 261 aaKnown RBP8.32□□□□□ -1.08
PTPN3-204ENST00000446349 ARHGAP12Q8IWW6 846 aa8.32□□□□□ -1.08
PTPN3-204ENST00000446349 EZH1Q92800 747 aaPredicted RBP8.32□□□□□ -1.08
PTPN3-204ENST00000446349 CNDP2Q96KP4 475 aaKnown RBP8.32□□□□□ -1.08
PTPN3-204ENST00000446349 EBF3Q9H4W6 596 aa8.32□□□□□ -1.08
PTPN3-204ENST00000446349 TCF7L1Q9HCS4 588 aa8.32□□□□□ -1.08
PTPN3-204ENST00000446349 PIGVQ9NUD9 493 aa8.32□□□□□ -1.08
PTPN3-204ENST00000446349 GPRC5BQ9NZH0 403 aa8.32□□□□□ -1.08
PTPN3-204ENST00000446349 PABPC4LP0CB38 370 aaKnown RBP8.32□□□□□ -1.08
PTPN3-204ENST00000446349 MPSTP25325 297 aa8.32□□□□□ -1.08
PTPN3-204ENST00000446349 CAPZA1P52907 286 aa8.32□□□□□ -1.08
PTPN3-204ENST00000446349 BTN3A2P78410 334 aa8.32□□□□□ -1.08
PTPN3-204ENST00000446349 HSF2Q03933 536 aa8.32□□□□□ -1.08
PTPN3-204ENST00000446349 DSG2Q14126 1118 aa8.32□□□□□ -1.08
PTPN3-204ENST00000446349 TCEAL1Q15170 157 aa8.32□□□□□ -1.08
PTPN3-204ENST00000446349 RNF19BQ6ZMZ0 732 aa8.32□□□□□ -1.08
PTPN3-204ENST00000446349 SIX5Q8N196 739 aa8.32□□□□□ -1.08
PTPN3-204ENST00000446349 UFD1Q92890 307 aa8.32□□□□□ -1.08
PTPN3-204ENST00000446349 MARK4Q96L34 752 aa8.32□□□□□ -1.08
PTPN3-204ENST00000446349 PAIP1Q9H074 479 aaKnown RBP8.32□□□□□ -1.08
PTPN3-204ENST00000446349 UTS2RQ9UKP6 389 aa8.32□□□□□ -1.08
PTPN3-204ENST00000446349 ENTPD2Q9Y5L3 495 aa8.32□□□□□ -1.08
PTPN3-204ENST00000446349 PKD1L3Q7Z443 1732 aa8.32□□□□□ -1.08
PTPN3-204ENST00000446349 CSF2RAP15509 400 aa8.32□□□□□ -1.08
PTPN3-204ENST00000446349 TNFRSF4P43489 277 aa8.32□□□□□ -1.08
PTPN3-204ENST00000446349 TAS2R43P59537 309 aa8.32□□□□□ -1.08
PTPN3-204ENST00000446349 TMEM115Q12893 351 aaPredicted RBP8.32□□□□□ -1.08
PTPN3-204ENST00000446349 MELKQ14680 651 aa8.32□□□□□ -1.08
PTPN3-204ENST00000446349 MORN1Q5T089 497 aa8.32□□□□□ -1.08
PTPN3-204ENST00000446349 NCBP2-AS2Q69YL0 99 aa8.32□□□□□ -1.08
PTPN3-204ENST00000446349 ALKBH2Q6NS38 261 aa8.32□□□□□ -1.08
PTPN3-204ENST00000446349 ASB18Q6ZVZ8 466 aa8.32□□□□□ -1.08
PTPN3-204ENST00000446349 SLC22A15Q8IZD6 547 aa8.32□□□□□ -1.08
PTPN3-204ENST00000446349 GLYATL1Q969I3 302 aa8.32□□□□□ -1.08
PTPN3-204ENST00000446349 COQ7Q99807 217 aa8.32□□□□□ -1.08
PTPN3-204ENST00000446349 HDHD5Q9BXW7 423 aa8.32□□□□□ -1.08
PTPN3-204ENST00000446349 HOXD1Q9GZZ0 328 aa8.32□□□□□ -1.08
PTPN3-204ENST00000446349 SEMA6AQ9H2E6 1030 aa8.32□□□□□ -1.08
PTPN3-204ENST00000446349 ADAM7Q9H2U9 754 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms