RNA–Protein interactions for RNA: ENST00000445889.5

ERCC3-203, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-203ENST00000445889 TBL1XO60907 577 aa13.8□□□□□ -0.2
ERCC3-203ENST00000445889 STC2O76061 302 aa13.8□□□□□ -0.2
ERCC3-203ENST00000445889 FABP3P05413 133 aa13.8□□□□□ -0.2
ERCC3-203ENST00000445889 ITGAMP11215 1152 aa13.8□□□□□ -0.2
ERCC3-203ENST00000445889 DGKAP23743 735 aa13.8□□□□□ -0.2
ERCC3-203ENST00000445889 SLC19A1P41440 591 aa13.8□□□□□ -0.2
ERCC3-203ENST00000445889 MADCAM1Q13477 382 aa13.8□□□□□ -0.2
ERCC3-203ENST00000445889 BCL2A1Q16548 175 aa13.8□□□□□ -0.2
ERCC3-203ENST00000445889 AKAP14Q86UN6 197 aa13.8□□□□□ -0.2
ERCC3-203ENST00000445889 TRIB2Q92519 343 aa13.8□□□□□ -0.2
ERCC3-203ENST00000445889 ZNF566Q969W8 418 aa13.8□□□□□ -0.2
ERCC3-203ENST00000445889 Q96MT0 163 aa13.8□□□□□ -0.2
ERCC3-203ENST00000445889 TTPALQ9BTX7 342 aa13.8□□□□□ -0.2
ERCC3-203ENST00000445889 RLIMQ9NVW2 624 aa13.8□□□□□ -0.2
ERCC3-203ENST00000445889 SNX8Q9Y5X2 465 aa13.8□□□□□ -0.2
ERCC3-203ENST00000445889 C5orf42Q9H799 3197 aa13.8□□□□□ -0.2
ERCC3-203ENST00000445889 ERN1O75460 977 aaKnown RBP13.8□□□□□ -0.2
ERCC3-203ENST00000445889 CLDN11O75508 207 aa13.8□□□□□ -0.2
ERCC3-203ENST00000445889 UPK1BO75841 260 aa13.8□□□□□ -0.2
ERCC3-203ENST00000445889 WDR47O94967 919 aa13.8□□□□□ -0.2
ERCC3-203ENST00000445889 KCNK5O95279 499 aa13.8□□□□□ -0.2
ERCC3-203ENST00000445889 BPIP17213 487 aa13.8□□□□□ -0.2
ERCC3-203ENST00000445889 KDELR2P33947 212 aa13.8□□□□□ -0.2
ERCC3-203ENST00000445889 IL18R1Q13478 541 aa13.8□□□□□ -0.2
ERCC3-203ENST00000445889 CAPN13Q6MZZ7 669 aaPredicted RBP13.8□□□□□ -0.2
ERCC3-203ENST00000445889 VRK3Q8IV63 474 aa13.8□□□□□ -0.2
ERCC3-203ENST00000445889 P3H2Q8IVL5 708 aa13.8□□□□□ -0.2
ERCC3-203ENST00000445889 NLGN4XQ8N0W4 816 aa13.8□□□□□ -0.2
ERCC3-203ENST00000445889 MINDY2Q8NBR6 621 aa13.8□□□□□ -0.2
ERCC3-203ENST00000445889 GLB1L3Q8NCI6 653 aaPredicted RBP13.8□□□□□ -0.2
ERCC3-203ENST00000445889 FBLIM1Q8WUP2 373 aa13.8□□□□□ -0.2
ERCC3-203ENST00000445889 COPS4Q9BT78 406 aa13.8□□□□□ -0.2
ERCC3-203ENST00000445889 GPR83Q9NYM4 423 aa13.8□□□□□ -0.2
ERCC3-203ENST00000445889 LHX3Q9UBR4 397 aa13.8□□□□□ -0.2
ERCC3-203ENST00000445889 CD84Q9UIB8 345 aa13.8□□□□□ -0.2
ERCC3-203ENST00000445889 EVPLLA8MZ36 301 aa13.8□□□□□ -0.2
ERCC3-203ENST00000445889 M0R082 166 aa13.8□□□□□ -0.2
ERCC3-203ENST00000445889 JUNDP17535 347 aa13.8□□□□□ -0.2
ERCC3-203ENST00000445889 HNF1BP35680 557 aa13.8□□□□□ -0.2
ERCC3-203ENST00000445889 GJA8P48165 433 aa13.8□□□□□ -0.2
ERCC3-203ENST00000445889 CLDN8P56748 225 aa13.8□□□□□ -0.2
ERCC3-203ENST00000445889 NPRL3Q12980 569 aa13.8□□□□□ -0.2
ERCC3-203ENST00000445889 MAD2L1Q13257 205 aaPredicted RBP13.8□□□□□ -0.2
ERCC3-203ENST00000445889 ZNF404Q494X3 552 aa13.8□□□□□ -0.2
ERCC3-203ENST00000445889 NEK5Q6P3R8 708 aa13.8□□□□□ -0.2
ERCC3-203ENST00000445889 CCDC103Q8IW40 242 aa13.8□□□□□ -0.2
ERCC3-203ENST00000445889 PLPP6Q8IY26 295 aa13.8□□□□□ -0.2
ERCC3-203ENST00000445889 APCDD1Q8J025 514 aa13.8□□□□□ -0.2
ERCC3-203ENST00000445889 LMNTD1Q8N9Z9 388 aa13.8□□□□□ -0.2
ERCC3-203ENST00000445889 CHCHD6Q9BRQ6 235 aa13.8□□□□□ -0.2
ERCC3-203ENST00000445889 MAGIXQ9H6Y5 334 aa13.8□□□□□ -0.2
ERCC3-203ENST00000445889 RAD18Q9NS91 495 aa13.8□□□□□ -0.2
ERCC3-203ENST00000445889 TMEM45AQ9NWC5 275 aa13.8□□□□□ -0.2
ERCC3-203ENST00000445889 C14orf119Q9NWQ9 140 aa13.8□□□□□ -0.2
ERCC3-203ENST00000445889 OSGIN1Q9UJX0 560 aa13.8□□□□□ -0.2
ERCC3-203ENST00000445889 NDRG4Q9ULP0 352 aaKnown RBP13.8□□□□□ -0.2
ERCC3-203ENST00000445889 CCNDBP1O95273 360 aa13.79□□□□□ -0.2
ERCC3-203ENST00000445889 KRT6AP02538 564 aa13.79□□□□□ -0.2
ERCC3-203ENST00000445889 KRT6BP04259 564 aa13.79□□□□□ -0.2
ERCC3-203ENST00000445889 STSP08842 583 aa13.79□□□□□ -0.2
ERCC3-203ENST00000445889 EBLN1P0CF75 366 aa13.79□□□□□ -0.2
ERCC3-203ENST00000445889 KRT6CP48668 564 aa13.79□□□□□ -0.2
ERCC3-203ENST00000445889 CAMK2GQ13555 558 aaPredicted RBP13.79□□□□□ -0.2
ERCC3-203ENST00000445889 BOP1Q14137 746 aaKnown RBP13.79□□□□□ -0.2
ERCC3-203ENST00000445889 PTCHD3Q3KNS1 767 aa13.79□□□□□ -0.2
ERCC3-203ENST00000445889 ZC3H12BQ5HYM0 836 aaKnown RBP13.79□□□□□ -0.2
ERCC3-203ENST00000445889 GPRC6AQ5T6X5 926 aa13.79□□□□□ -0.2
ERCC3-203ENST00000445889 KIAA1614Q5VZ46 1190 aa13.79□□□□□ -0.2
ERCC3-203ENST00000445889 DESI1Q6ICB0 168 aa13.79□□□□□ -0.2
ERCC3-203ENST00000445889 RBFAQ8N0V3 343 aa13.79□□□□□ -0.2
ERCC3-203ENST00000445889 CACTIN-AS1Q8N1I8 211 aa13.79□□□□□ -0.2
ERCC3-203ENST00000445889 STK40Q8N2I9 435 aa13.79□□□□□ -0.2
ERCC3-203ENST00000445889 UTP15Q8TED0 518 aaKnown RBP13.79□□□□□ -0.2
ERCC3-203ENST00000445889 PDLIM5Q96HC4 596 aaKnown RBP13.79□□□□□ -0.2
ERCC3-203ENST00000445889 PIKFYVEQ9Y2I7 2098 aa13.79□□□□□ -0.2
ERCC3-203ENST00000445889 A0A0C4DFX4 3053 aa13.79□□□□□ -0.2
ERCC3-203ENST00000445889 ILVBLA1L0T0 632 aa13.79□□□□□ -0.2
ERCC3-203ENST00000445889 OR2A25A4D2G3 310 aa13.79□□□□□ -0.2
ERCC3-203ENST00000445889 CYP7B1O75881 506 aa13.79□□□□□ -0.2
ERCC3-203ENST00000445889 GBAP04062 536 aa13.79□□□□□ -0.2
ERCC3-203ENST00000445889 RRM2P31350 389 aa13.79□□□□□ -0.2
ERCC3-203ENST00000445889 DNAJA1P31689 397 aaKnown RBP13.79□□□□□ -0.2
ERCC3-203ENST00000445889 KIR3DL1P43629 444 aa13.79□□□□□ -0.2
ERCC3-203ENST00000445889 ABHD18Q0P651 414 aa13.79□□□□□ -0.2
ERCC3-203ENST00000445889 PLEKHG6Q3KR16 790 aa13.79□□□□□ -0.2
ERCC3-203ENST00000445889 FAM180BQ6P0A1 224 aa13.79□□□□□ -0.2
ERCC3-203ENST00000445889 SLC24A5Q71RS6 500 aa13.79□□□□□ -0.2
ERCC3-203ENST00000445889 SVOPQ8N4V2 548 aa13.79□□□□□ -0.2
ERCC3-203ENST00000445889 BEND7Q8N7W2 519 aaPredicted RBP13.79□□□□□ -0.2
ERCC3-203ENST00000445889 SPPL2AQ8TCT8 520 aa13.79□□□□□ -0.2
ERCC3-203ENST00000445889 PIH1D2Q8WWB5 315 aa13.79□□□□□ -0.2
ERCC3-203ENST00000445889 USP7Q93009 1102 aa13.79□□□□□ -0.2
ERCC3-203ENST00000445889 SH3KBP1Q96B97 665 aa13.79□□□□□ -0.2
ERCC3-203ENST00000445889 SLC22A12Q96S37 553 aa13.79□□□□□ -0.2
ERCC3-203ENST00000445889 CENPOQ9BU64 300 aa13.79□□□□□ -0.2
ERCC3-203ENST00000445889 REEP1Q9H902 201 aa13.79□□□□□ -0.2
ERCC3-203ENST00000445889 ITGB1BP2Q9UKP3 347 aa13.79□□□□□ -0.2
ERCC3-203ENST00000445889 SAMD4AQ9UPU9 718 aaKnown RBP13.79□□□□□ -0.2
ERCC3-203ENST00000445889 RNF6Q9Y252 685 aa13.79□□□□□ -0.2
ERCC3-203ENST00000445889 Q9Y3F1 56 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms