RNA–Protein interactions for RNA: ENST00000445497.1

UBBP3-201, Transcript of ubiquitin B pseudogene 3, humanhuman

BASIC

Gene UBBP3, Length 241 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP3-201ENST00000445497 ARNTL2Q8WYA1 636 aa2.71□□□□□ -1.98
UBBP3-201ENST00000445497 ROBO4Q8WZ75 1007 aa2.71□□□□□ -1.98
UBBP3-201ENST00000445497 GTF3AQ92664 365 aaKnown RBP2.71□□□□□ -1.98
UBBP3-201ENST00000445497 HAS2Q92819 552 aa2.71□□□□□ -1.98
UBBP3-201ENST00000445497 SMARCD2Q92925 531 aa2.71□□□□□ -1.98
UBBP3-201ENST00000445497 CD101Q93033 1021 aa2.71□□□□□ -1.98
UBBP3-201ENST00000445497 UTP4Q969X6 686 aaKnown RBP2.71□□□□□ -1.98
UBBP3-201ENST00000445497 CPNE4Q96A23 557 aaPredicted RBP2.71□□□□□ -1.98
UBBP3-201ENST00000445497 SLCO4A1Q96BD0 722 aa2.71□□□□□ -1.98
UBBP3-201ENST00000445497 CCDC127Q96BQ5 260 aa2.71□□□□□ -1.98
UBBP3-201ENST00000445497 ZNF707Q96C28 371 aaPredicted RBP2.71□□□□□ -1.98
UBBP3-201ENST00000445497 DUS3LQ96G46 650 aaKnown RBP2.71□□□□□ -1.98
UBBP3-201ENST00000445497 B3GALT6Q96L58 329 aa2.71□□□□□ -1.98
UBBP3-201ENST00000445497 MRGPRX4Q96LA9 322 aa2.71□□□□□ -1.98
UBBP3-201ENST00000445497 LINC00615Q96LM1 132 aaPredicted RBP2.71□□□□□ -1.98
UBBP3-201ENST00000445497 LRRC3BQ96PB8 259 aa2.71□□□□□ -1.98
UBBP3-201ENST00000445497 CSPG4P5Q96PW8 444 aa2.71□□□□□ -1.98
UBBP3-201ENST00000445497 VPS35Q96QK1 796 aa2.71□□□□□ -1.98
UBBP3-201ENST00000445497 ACCSQ96QU6 501 aa2.71□□□□□ -1.98
UBBP3-201ENST00000445497 NPY6RQ99463 290 aa2.71□□□□□ -1.98
UBBP3-201ENST00000445497 CTRCQ99895 268 aa2.71□□□□□ -1.98
UBBP3-201ENST00000445497 C7orf50Q9BRJ6 194 aaKnown RBP2.71□□□□□ -1.98
UBBP3-201ENST00000445497 PELOQ9BRX2 385 aaKnown RBP2.71□□□□□ -1.98
UBBP3-201ENST00000445497 CENPKQ9BS16 269 aa2.71□□□□□ -1.98
UBBP3-201ENST00000445497 TMEM43Q9BTV4 400 aa2.71□□□□□ -1.98
UBBP3-201ENST00000445497 CHRDL1Q9BU40 450 aa2.71□□□□□ -1.98
UBBP3-201ENST00000445497 C1orf43Q9BWL3 253 aa2.71□□□□□ -1.98
UBBP3-201ENST00000445497 FTHL17Q9BXU8 183 aa2.71□□□□□ -1.98
UBBP3-201ENST00000445497 MRPL13Q9BYD1 178 aaKnown RBP2.71□□□□□ -1.98
UBBP3-201ENST00000445497 GPR88Q9GZN0 384 aa2.71□□□□□ -1.98
UBBP3-201ENST00000445497 SLC6A16Q9GZN6 736 aa2.71□□□□□ -1.98
UBBP3-201ENST00000445497 OPN3Q9H1Y3 402 aaPredicted RBP2.71□□□□□ -1.98
UBBP3-201ENST00000445497 GANQ9H2C0 597 aa2.71□□□□□ -1.98
UBBP3-201ENST00000445497 SLC6A15Q9H2J7 730 aa2.71□□□□□ -1.98
UBBP3-201ENST00000445497 EPB41L4BQ9H329 900 aa2.71□□□□□ -1.98
UBBP3-201ENST00000445497 PIGUQ9H490 435 aa2.71□□□□□ -1.98
UBBP3-201ENST00000445497 MTG2Q9H4K7 406 aa2.71□□□□□ -1.98
UBBP3-201ENST00000445497 NOL11Q9H8H0 719 aaKnown RBP2.71□□□□□ -1.98
UBBP3-201ENST00000445497 SRD5A3Q9H8P0 318 aa2.71□□□□□ -1.98
UBBP3-201ENST00000445497 PLEKHA2Q9HB19 425 aa2.71□□□□□ -1.98
UBBP3-201ENST00000445497 LRRC4Q9HBW1 653 aa2.71□□□□□ -1.98
UBBP3-201ENST00000445497 MYOZ1Q9NP98 299 aaPredicted RBP2.71□□□□□ -1.98
UBBP3-201ENST00000445497 BRD7Q9NPI1 651 aa2.71□□□□□ -1.98
UBBP3-201ENST00000445497 ASCL3Q9NQ33 180 aa2.71□□□□□ -1.98
UBBP3-201ENST00000445497 PRDM9Q9NQV7 894 aa2.71□□□□□ -1.98
UBBP3-201ENST00000445497 RNF146Q9NTX7 359 aa2.71□□□□□ -1.98
UBBP3-201ENST00000445497 HIF1ANQ9NWT6 349 aa2.71□□□□□ -1.98
UBBP3-201ENST00000445497 P4HTMQ9NXG6 502 aa2.71□□□□□ -1.98
UBBP3-201ENST00000445497 SIDT1Q9NXL6 827 aaKnown RBP2.71□□□□□ -1.98
UBBP3-201ENST00000445497 DPP3Q9NY33 737 aa2.71□□□□□ -1.98
UBBP3-201ENST00000445497 SLCO1C1Q9NYB5 712 aa2.71□□□□□ -1.98
UBBP3-201ENST00000445497 HAO2Q9NYQ3 351 aa2.71□□□□□ -1.98
UBBP3-201ENST00000445497 TAS2R1Q9NYW7 299 aa2.71□□□□□ -1.98
UBBP3-201ENST00000445497 GPRC5DQ9NZD1 345 aa2.71□□□□□ -1.98
UBBP3-201ENST00000445497 ABCD2Q9UBJ2 740 aa2.71□□□□□ -1.98
UBBP3-201ENST00000445497 BCAP29Q9UHQ4 241 aa2.71□□□□□ -1.98
UBBP3-201ENST00000445497 FBXW11Q9UKB1 542 aa2.71□□□□□ -1.98
UBBP3-201ENST00000445497 AMFRQ9UKV5 643 aa2.71□□□□□ -1.98
UBBP3-201ENST00000445497 ERVW-1Q9UQF0 538 aa2.71□□□□□ -1.98
UBBP3-201ENST00000445497 EXOGQ9Y2C4 368 aaKnown RBP2.71□□□□□ -1.98
UBBP3-201ENST00000445497 UBE2J1Q9Y385 318 aaPredicted RBP2.71□□□□□ -1.98
UBBP3-201ENST00000445497 GRIP1Q9Y3R0 1128 aa2.71□□□□□ -1.98
UBBP3-201ENST00000445497 PCDHA13Q9Y5I0 950 aa2.71□□□□□ -1.98
UBBP3-201ENST00000445497 NPTNQ9Y639 398 aa2.71□□□□□ -1.98
UBBP3-201ENST00000445497 FKBP7Q9Y680 259 aa2.71□□□□□ -1.98
UBBP3-201ENST00000445497 MTUS2Q5JR59 1369 aa2.71□□□□□ -1.98
UBBP3-201ENST00000445497 MN1Q10571 1320 aaPredicted RBP2.7□□□□□ -1.98
UBBP3-201ENST00000445497 SPATA31A1Q5TZJ5 1347 aa2.7□□□□□ -1.98
UBBP3-201ENST00000445497 SPATA31A5Q5VU36 1347 aa2.7□□□□□ -1.98
UBBP3-201ENST00000445497 UBN2Q6ZU65 1347 aa2.7□□□□□ -1.98
UBBP3-201ENST00000445497 SPATA31A7Q8IWB4 1347 aa2.7□□□□□ -1.98
UBBP3-201ENST00000445497 ZNF521Q96K83 1311 aa2.7□□□□□ -1.98
UBBP3-201ENST00000445497 ATXN2Q99700 1313 aaKnown RBP2.7□□□□□ -1.98
UBBP3-201ENST00000445497 ZNF541Q9H0D2 1346 aa2.7□□□□□ -1.98
UBBP3-201ENST00000445497 SALL1Q9NSC2 1324 aa2.7□□□□□ -1.98
UBBP3-201ENST00000445497 A0A087WWL8 130 aa2.7□□□□□ -1.98
UBBP3-201ENST00000445497 A0A0A6YYC8 382 aaPredicted RBP2.7□□□□□ -1.98
UBBP3-201ENST00000445497 UBA6A0AVT1 1052 aaPredicted RBP2.7□□□□□ -1.98
UBBP3-201ENST00000445497 SMCO3A2RU48 225 aa2.7□□□□□ -1.98
UBBP3-201ENST00000445497 C17orf102A2RUQ5 167 aa2.7□□□□□ -1.98
UBBP3-201ENST00000445497 MTMR11A4FU01 709 aa2.7□□□□□ -1.98
UBBP3-201ENST00000445497 SLC35F4A4IF30 521 aa2.7□□□□□ -1.98
UBBP3-201ENST00000445497 CLEC18AA5D8T8 446 aa2.7□□□□□ -1.98
UBBP3-201ENST00000445497 C2orf71A6NGG8 1288 aa2.7□□□□□ -1.98
UBBP3-201ENST00000445497 A6NIZ1 184 aa2.7□□□□□ -1.98
UBBP3-201ENST00000445497 ZNF233A6NK53 670 aa2.7□□□□□ -1.98
UBBP3-201ENST00000445497 ZNF729A6NN14 1252 aaPredicted RBP2.7□□□□□ -1.98
UBBP3-201ENST00000445497 KIAA1324LA8MWY0 1029 aaPredicted RBP2.7□□□□□ -1.98
UBBP3-201ENST00000445497 MAGEB17A8MXT2 336 aa2.7□□□□□ -1.98
UBBP3-201ENST00000445497 C22orf46C9J442 243 aa2.7□□□□□ -1.98
UBBP3-201ENST00000445497 E7EWF7 191 aa2.7□□□□□ -1.98
UBBP3-201ENST00000445497 E9PAM4 449 aa2.7□□□□□ -1.98
UBBP3-201ENST00000445497 NPIPB8E9PQR5 432 aa2.7□□□□□ -1.98
UBBP3-201ENST00000445497 I3L1I5 382 aaPredicted RBP2.7□□□□□ -1.98
UBBP3-201ENST00000445497 M0QZK8 103 aa2.7□□□□□ -1.98
UBBP3-201ENST00000445497 SCDO00767 359 aa2.7□□□□□ -1.98
UBBP3-201ENST00000445497 KCNK3O14649 394 aa2.7□□□□□ -1.98
UBBP3-201ENST00000445497 SLC22A1O15245 554 aa2.7□□□□□ -1.98
UBBP3-201ENST00000445497 TLX3O43711 291 aaPredicted RBP2.7□□□□□ -1.98
UBBP3-201ENST00000445497 PRICKLE3O43900 615 aaPredicted RBP2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms