RNA–Protein interactions for RNA: ENST00000443016.1

USP6NL-203, Transcript of USP6 N-terminal like, humanhuman

TSL 2

Gene USP6NL, Length 2,491 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-203ENST00000443016 UNC5DQ6UXZ4 953 aa8.43□□□□□ -1.06
USP6NL-203ENST00000443016 ASB18Q6ZVZ8 466 aa8.43□□□□□ -1.06
USP6NL-203ENST00000443016 CROCCP2Q86T23 111 aa8.43□□□□□ -1.06
USP6NL-203ENST00000443016 FBF1Q8TES7 1133 aa8.43□□□□□ -1.06
USP6NL-203ENST00000443016 RAD51AP1Q96B01 352 aa8.43□□□□□ -1.06
USP6NL-203ENST00000443016 IL17FQ96PD4 163 aa8.43□□□□□ -1.06
USP6NL-203ENST00000443016 SERINC2Q96SA4 455 aa8.43□□□□□ -1.06
USP6NL-203ENST00000443016 NDC1Q9BTX1 674 aa8.43□□□□□ -1.06
USP6NL-203ENST00000443016 ING2Q9H160 280 aa8.43□□□□□ -1.06
USP6NL-203ENST00000443016 EPN3Q9H201 632 aa8.43□□□□□ -1.06
USP6NL-203ENST00000443016 GPN3Q9UHW5 284 aaPredicted RBP8.43□□□□□ -1.06
USP6NL-203ENST00000443016 CDYLQ9Y232 598 aa8.43□□□□□ -1.06
USP6NL-203ENST00000443016 CRYL1Q9Y2S2 319 aa8.43□□□□□ -1.06
USP6NL-203ENST00000443016 VSTM5A8MXK1 200 aa8.42□□□□□ -1.06
USP6NL-203ENST00000443016 ZSCAN9O15535 394 aaPredicted RBP8.42□□□□□ -1.06
USP6NL-203ENST00000443016 RAB40ALP0C0E4 278 aa8.42□□□□□ -1.06
USP6NL-203ENST00000443016 TPBGLP0DKB5 382 aa8.42□□□□□ -1.06
USP6NL-203ENST00000443016 ALAS2P22557 587 aa8.42□□□□□ -1.06
USP6NL-203ENST00000443016 RORAP35398 523 aa8.42□□□□□ -1.06
USP6NL-203ENST00000443016 CASRP41180 1078 aa8.42□□□□□ -1.06
USP6NL-203ENST00000443016 CCL11P51671 97 aa8.42□□□□□ -1.06
USP6NL-203ENST00000443016 KLRB1Q12918 225 aa8.42□□□□□ -1.06
USP6NL-203ENST00000443016 CHAF1BQ13112 559 aa8.42□□□□□ -1.06
USP6NL-203ENST00000443016 NCF4Q15080 339 aa8.42□□□□□ -1.06
USP6NL-203ENST00000443016 ZIC1Q15915 447 aa8.42□□□□□ -1.06
USP6NL-203ENST00000443016 SLC5A12Q1EHB4 618 aa8.42□□□□□ -1.06
USP6NL-203ENST00000443016 ANKRD20A4Q4UJ75 823 aa8.42□□□□□ -1.06
USP6NL-203ENST00000443016 ZNF789Q5FWF6 425 aa8.42□□□□□ -1.06
USP6NL-203ENST00000443016 COLEC12Q5KU26 742 aa8.42□□□□□ -1.06
USP6NL-203ENST00000443016 FAM69BQ5VUD6 431 aa8.42□□□□□ -1.06
USP6NL-203ENST00000443016 KIAA0930Q6ICG6 404 aaPredicted RBP8.42□□□□□ -1.06
USP6NL-203ENST00000443016 LCN10Q6JVE6 187 aa8.42□□□□□ -1.06
USP6NL-203ENST00000443016 C3orf62Q6ZUJ4 267 aa8.42□□□□□ -1.06
USP6NL-203ENST00000443016 KRT77Q7Z794 578 aa8.42□□□□□ -1.06
USP6NL-203ENST00000443016 APLFQ8IW19 511 aaPredicted RBP8.42□□□□□ -1.06
USP6NL-203ENST00000443016 FAM20CQ8IXL6 584 aa8.42□□□□□ -1.06
USP6NL-203ENST00000443016 ZNF655Q8N720 491 aaPredicted RBP8.42□□□□□ -1.06
USP6NL-203ENST00000443016 LINC01555Q8NAE3 123 aa8.42□□□□□ -1.06
USP6NL-203ENST00000443016 TCF12Q99081 682 aa8.42□□□□□ -1.06
USP6NL-203ENST00000443016 RAB11FIP5Q9BXF6 653 aa8.42□□□□□ -1.06
USP6NL-203ENST00000443016 SPRTNQ9H040 489 aaPredicted RBP8.42□□□□□ -1.06
USP6NL-203ENST00000443016 P2RY12Q9H244 342 aa8.42□□□□□ -1.06
USP6NL-203ENST00000443016 INTS7Q9NVH2 962 aaKnown RBP8.42□□□□□ -1.06
USP6NL-203ENST00000443016 PFDN2Q9UHV9 154 aa8.42□□□□□ -1.06
USP6NL-203ENST00000443016 PLCL2Q9UPR0 1127 aa8.42□□□□□ -1.06
USP6NL-203ENST00000443016 RUVBL2Q9Y230 463 aaKnown RBP8.42□□□□□ -1.06
USP6NL-203ENST00000443016 KLHL20Q9Y2M5 609 aa8.42□□□□□ -1.06
USP6NL-203ENST00000443016 S1PR4O95977 384 aa8.42□□□□□ -1.06
USP6NL-203ENST00000443016 RPS3P23396 243 aaKnown RBP eCLIP8.42□□□□□ -1.06
USP6NL-203ENST00000443016 PKLRP30613 574 aa8.42□□□□□ -1.06
USP6NL-203ENST00000443016 NEK2P51955 445 aa8.42□□□□□ -1.06
USP6NL-203ENST00000443016 NAB1Q13506 487 aa8.42□□□□□ -1.06
USP6NL-203ENST00000443016 THOC5Q13769 683 aaKnown RBP8.42□□□□□ -1.06
USP6NL-203ENST00000443016 FRG1Q14331 258 aaKnown RBP8.42□□□□□ -1.06
USP6NL-203ENST00000443016 CASP8Q14790 479 aa8.42□□□□□ -1.06
USP6NL-203ENST00000443016 MLC1Q15049 377 aa8.42□□□□□ -1.06
USP6NL-203ENST00000443016 TLDC1Q6P9B6 456 aa8.42□□□□□ -1.06
USP6NL-203ENST00000443016 LMNTD2Q8IXW0 634 aa8.42□□□□□ -1.06
USP6NL-203ENST00000443016 LMNTD1Q8N9Z9 388 aa8.42□□□□□ -1.06
USP6NL-203ENST00000443016 CALML6Q8TD86 181 aa8.42□□□□□ -1.06
USP6NL-203ENST00000443016 MAGEC3Q8TD91 643 aa8.42□□□□□ -1.06
USP6NL-203ENST00000443016 CERS2Q96G23 380 aa8.42□□□□□ -1.06
USP6NL-203ENST00000443016 CYTH2Q99418 400 aa8.42□□□□□ -1.06
USP6NL-203ENST00000443016 FAM167BQ9BTA0 163 aa8.42□□□□□ -1.06
USP6NL-203ENST00000443016 SLC25A23Q9BV35 468 aa8.42□□□□□ -1.06
USP6NL-203ENST00000443016 CCDC68Q9H2F9 335 aa8.42□□□□□ -1.06
USP6NL-203ENST00000443016 LRRC4CQ9HCJ2 640 aa8.42□□□□□ -1.06
USP6NL-203ENST00000443016 PPANQ9NQ55 473 aaKnown RBP8.42□□□□□ -1.06
USP6NL-203ENST00000443016 NSMCE4AQ9NXX6 385 aa8.42□□□□□ -1.06
USP6NL-203ENST00000443016 IFT80Q9P2H3 777 aaPredicted RBP8.42□□□□□ -1.06
USP6NL-203ENST00000443016 TXNDC16Q9P2K2 825 aa8.42□□□□□ -1.06
USP6NL-203ENST00000443016 DHCR7Q9UBM7 475 aaKnown RBP8.42□□□□□ -1.06
USP6NL-203ENST00000443016 NDOR1Q9UHB4 597 aa8.42□□□□□ -1.06
USP6NL-203ENST00000443016 SRPK3Q9UPE1 567 aa8.42□□□□□ -1.06
USP6NL-203ENST00000443016 VPS9D1Q9Y2B5 631 aa8.42□□□□□ -1.06
USP6NL-203ENST00000443016 NFS1Q9Y697 457 aa8.42□□□□□ -1.06
USP6NL-203ENST00000443016 IKBKGQ9Y6K9 419 aa8.42□□□□□ -1.06
USP6NL-203ENST00000443016 FAM169AQ9Y6X4 670 aa8.42□□□□□ -1.06
USP6NL-203ENST00000443016 MAST4O15021 2626 aa8.42□□□□□ -1.06
USP6NL-203ENST00000443016 EXOC1LA0A1B0GW35 172 aa8.41□□□□□ -1.06
USP6NL-203ENST00000443016 GOLGA6L10A6NI86 522 aa8.41□□□□□ -1.06
USP6NL-203ENST00000443016 H3BMM5 538 aa8.41□□□□□ -1.06
USP6NL-203ENST00000443016 HCRTR1O43613 425 aa8.41□□□□□ -1.06
USP6NL-203ENST00000443016 NIPSNAP2O75323 286 aa8.41□□□□□ -1.06
USP6NL-203ENST00000443016 ESR1P03372 595 aa8.41□□□□□ -1.06
USP6NL-203ENST00000443016 NUDT17P0C025 328 aa8.41□□□□□ -1.06
USP6NL-203ENST00000443016 ARNTP27540 789 aa8.41□□□□□ -1.06
USP6NL-203ENST00000443016 SSTR1P30872 391 aa8.41□□□□□ -1.06
USP6NL-203ENST00000443016 GRIA3P42263 894 aa8.41□□□□□ -1.06
USP6NL-203ENST00000443016 DCDP81605 110 aaKnown RBP8.41□□□□□ -1.06
USP6NL-203ENST00000443016 SLC29A2Q14542 456 aa8.41□□□□□ -1.06
USP6NL-203ENST00000443016 SLC9A5Q14940 896 aa8.41□□□□□ -1.06
USP6NL-203ENST00000443016 SETDB1Q15047 1291 aa8.41□□□□□ -1.06
USP6NL-203ENST00000443016 TUBB8Q3ZCM7 444 aa8.41□□□□□ -1.06
USP6NL-203ENST00000443016 GLIPR1L2Q4G1C9 344 aa8.41□□□□□ -1.06
USP6NL-203ENST00000443016 CPZQ66K79 652 aa8.41□□□□□ -1.06
USP6NL-203ENST00000443016 ZNF470Q6ECI4 717 aa8.41□□□□□ -1.06
USP6NL-203ENST00000443016 RHBDD2Q6NTF9 364 aa8.41□□□□□ -1.06
USP6NL-203ENST00000443016 NEPROQ6NW34 567 aa8.41□□□□□ -1.06
USP6NL-203ENST00000443016 SPATC1Q76KD6 591 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms