RNA–Protein interactions for RNA: ENST00000442515.5

LINC00642-202, long intergenic non-protein coding RNA 642, humanhuman

TSL 3 BASIC

Gene LINC00642, Length 670 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-202ENST00000442515 NPAS2Q99743 824 aa13.19□□□□□ -0.3
LINC00642-202ENST00000442515 UTP23Q9BRU9 249 aaKnown RBP13.19□□□□□ -0.3
LINC00642-202ENST00000442515 TGIF2Q9GZN2 237 aa13.19□□□□□ -0.3
LINC00642-202ENST00000442515 KCNJ16Q9NPI9 418 aa13.19□□□□□ -0.3
LINC00642-202ENST00000442515 MKKSQ9NPJ1 570 aaPredicted RBP13.19□□□□□ -0.3
LINC00642-202ENST00000442515 TRHDEQ9UKU6 1024 aa13.19□□□□□ -0.3
LINC00642-202ENST00000442515 MKL2Q9ULH7 1088 aa13.19□□□□□ -0.3
LINC00642-202ENST00000442515 CDC14AQ9UNH5 594 aa13.19□□□□□ -0.3
LINC00642-202ENST00000442515 PLEKHA6Q9Y2H5 1048 aa13.19□□□□□ -0.3
LINC00642-202ENST00000442515 KLK4Q9Y5K2 254 aa13.19□□□□□ -0.3
LINC00642-202ENST00000442515 H7C0S8 307 aa13.18□□□□□ -0.3
LINC00642-202ENST00000442515 MAN1A2O60476 641 aa13.18□□□□□ -0.3
LINC00642-202ENST00000442515 FKBP9O95302 570 aa13.18□□□□□ -0.3
LINC00642-202ENST00000442515 TPOP07202 933 aa13.18□□□□□ -0.3
LINC00642-202ENST00000442515 SLC26A3P40879 764 aa13.18□□□□□ -0.3
LINC00642-202ENST00000442515 CDKN2BP42772 138 aa13.18□□□□□ -0.3
LINC00642-202ENST00000442515 TFDP2Q14188 446 aa13.18□□□□□ -0.3
LINC00642-202ENST00000442515 SYT16Q17RD7 645 aa13.18□□□□□ -0.3
LINC00642-202ENST00000442515 BTBD16Q32M84 506 aa13.18□□□□□ -0.3
LINC00642-202ENST00000442515 FILIP1LQ4L180 1135 aa13.18□□□□□ -0.3
LINC00642-202ENST00000442515 FIGNQ5HY92 759 aa13.18□□□□□ -0.3
LINC00642-202ENST00000442515 PLAG1Q6DJT9 500 aa13.18□□□□□ -0.3
LINC00642-202ENST00000442515 H3F3CQ6NXT2 135 aa13.18□□□□□ -0.3
LINC00642-202ENST00000442515 PRIMA1Q86XR5 153 aa13.18□□□□□ -0.3
LINC00642-202ENST00000442515 CRLF3Q8IUI8 442 aa13.18□□□□□ -0.3
LINC00642-202ENST00000442515 VRK3Q8IV63 474 aa13.18□□□□□ -0.3
LINC00642-202ENST00000442515 ZC3H7AQ8IWR0 971 aaKnown RBP13.18□□□□□ -0.3
LINC00642-202ENST00000442515 SLC22A15Q8IZD6 547 aa13.18□□□□□ -0.3
LINC00642-202ENST00000442515 FAM57AQ8TBR7 257 aa13.18□□□□□ -0.3
LINC00642-202ENST00000442515 SYN2Q92777 582 aaPredicted RBP13.18□□□□□ -0.3
LINC00642-202ENST00000442515 HAUS1Q96CS2 278 aa13.18□□□□□ -0.3
LINC00642-202ENST00000442515 MVB12AQ96EY5 273 aa13.18□□□□□ -0.3
LINC00642-202ENST00000442515 MIPEPQ99797 713 aa13.18□□□□□ -0.3
LINC00642-202ENST00000442515 ZNF358Q9NW07 568 aa13.18□□□□□ -0.3
LINC00642-202ENST00000442515 CHMP5Q9NZZ3 219 aa13.18□□□□□ -0.3
LINC00642-202ENST00000442515 IMPACTQ9P2X3 320 aa13.18□□□□□ -0.3
LINC00642-202ENST00000442515 GNPTGQ9UJJ9 305 aa13.18□□□□□ -0.3
LINC00642-202ENST00000442515 FN1P02751 2386 aaKnown RBP13.17□□□□□ -0.3
LINC00642-202ENST00000442515 INTS1Q8N201 2190 aaKnown RBP13.17□□□□□ -0.3
LINC00642-202ENST00000442515 A0A1B0GTH6 734 aa13.17□□□□□ -0.3
LINC00642-202ENST00000442515 GABRR3A8MPY1 467 aa13.17□□□□□ -0.3
LINC00642-202ENST00000442515 KIAA1324LA8MWY0 1029 aaPredicted RBP13.17□□□□□ -0.3
LINC00642-202ENST00000442515 CTAG2O75638 210 aa13.17□□□□□ -0.3
LINC00642-202ENST00000442515 NEURL1O76050 574 aa13.17□□□□□ -0.3
LINC00642-202ENST00000442515 RPN2P04844 631 aa13.17□□□□□ -0.3
LINC00642-202ENST00000442515 SP1P08047 785 aa13.17□□□□□ -0.3
LINC00642-202ENST00000442515 ANXA5P08758 320 aa13.17□□□□□ -0.3
LINC00642-202ENST00000442515 DNASE1P24855 282 aa13.17□□□□□ -0.3
LINC00642-202ENST00000442515 MEOX1P50221 254 aa13.17□□□□□ -0.3
LINC00642-202ENST00000442515 OC90Q02509 493 aaPredicted RBP13.17□□□□□ -0.3
LINC00642-202ENST00000442515 ITIH4Q14624 930 aa13.17□□□□□ -0.3
LINC00642-202ENST00000442515 MEP1AQ16819 746 aa13.17□□□□□ -0.3
LINC00642-202ENST00000442515 LRRC38Q5VT99 294 aa13.17□□□□□ -0.3
LINC00642-202ENST00000442515 KAZNQ674X7 775 aa13.17□□□□□ -0.3
LINC00642-202ENST00000442515 DENND5AQ6IQ26 1287 aa13.17□□□□□ -0.3
LINC00642-202ENST00000442515 SASS6Q6UVJ0 657 aa13.17□□□□□ -0.3
LINC00642-202ENST00000442515 PACS1Q6VY07 963 aa13.17□□□□□ -0.3
LINC00642-202ENST00000442515 LANCL3Q6ZV70 420 aa13.17□□□□□ -0.3
LINC00642-202ENST00000442515 CCDC71Q8IV32 467 aaPredicted RBP13.17□□□□□ -0.3
LINC00642-202ENST00000442515 OR2L3Q8NG85 312 aa13.17□□□□□ -0.3
LINC00642-202ENST00000442515 CFAP61Q8NHU2 1237 aa13.17□□□□□ -0.3
LINC00642-202ENST00000442515 P3H4Q92791 437 aa13.17□□□□□ -0.3
LINC00642-202ENST00000442515 MMABQ96EY8 250 aaPredicted RBP13.17□□□□□ -0.3
LINC00642-202ENST00000442515 RMND5BQ96G75 393 aaPredicted RBP13.17□□□□□ -0.3
LINC00642-202ENST00000442515 ZFYVE21Q9BQ24 234 aa13.17□□□□□ -0.3
LINC00642-202ENST00000442515 KCNK13Q9HB14 408 aa13.17□□□□□ -0.3
LINC00642-202ENST00000442515 SLC24A3Q9HC58 644 aa13.17□□□□□ -0.3
LINC00642-202ENST00000442515 SLC39A10Q9ULF5 831 aa13.17□□□□□ -0.3
LINC00642-202ENST00000442515 RUVBL1Q9Y265 456 aaKnown RBP13.17□□□□□ -0.3
LINC00642-202ENST00000442515 HRH3Q9Y5N1 445 aa13.17□□□□□ -0.3
LINC00642-202ENST00000442515 CSPG4Q6UVK1 2322 aa13.17□□□□□ -0.3
LINC00642-202ENST00000442515 FAM237BA0A1B0GVD1 139 aa13.16□□□□□ -0.3
LINC00642-202ENST00000442515 H0YGG7 62 aa13.16□□□□□ -0.3
LINC00642-202ENST00000442515 PROM1O43490 865 aa13.16□□□□□ -0.3
LINC00642-202ENST00000442515 SUN1O94901 812 aa13.16□□□□□ -0.3
LINC00642-202ENST00000442515 OR56A5P0C7T3 313 aa13.16□□□□□ -0.3
LINC00642-202ENST00000442515 TNNT1P13805 278 aa13.16□□□□□ -0.3
LINC00642-202ENST00000442515 PSMB4P28070 264 aa13.16□□□□□ -0.3
LINC00642-202ENST00000442515 PTGS2P35354 604 aa13.16□□□□□ -0.3
LINC00642-202ENST00000442515 EMP3P54852 163 aa13.16□□□□□ -0.3
LINC00642-202ENST00000442515 ARF3P61204 181 aaPredicted RBP13.16□□□□□ -0.3
LINC00642-202ENST00000442515 MAT1AQ00266 395 aaKnown RBP13.16□□□□□ -0.3
LINC00642-202ENST00000442515 TYRO3Q06418 890 aa13.16□□□□□ -0.3
LINC00642-202ENST00000442515 HKDC1Q2TB90 917 aa13.16□□□□□ -0.3
LINC00642-202ENST00000442515 TMEM198Q66K66 360 aa13.16□□□□□ -0.3
LINC00642-202ENST00000442515 ITPRIPL1Q6GPH6 555 aa13.16□□□□□ -0.3
LINC00642-202ENST00000442515 TMEM211Q6ICI0 200 aa13.16□□□□□ -0.3
LINC00642-202ENST00000442515 SLC25A25Q6KCM7 469 aa13.16□□□□□ -0.3
LINC00642-202ENST00000442515 CPEB2Q7Z5Q1 589 aaKnown RBP13.16□□□□□ -0.3
LINC00642-202ENST00000442515 RPRMLQ8N4K4 120 aa13.16□□□□□ -0.3
LINC00642-202ENST00000442515 CPSF7Q8N684 471 aaKnown RBP13.16□□□□□ -0.3
LINC00642-202ENST00000442515 CSNK1A1LQ8N752 337 aa13.16□□□□□ -0.3
LINC00642-202ENST00000442515 HORMAD2Q8N7B1 307 aa13.16□□□□□ -0.3
LINC00642-202ENST00000442515 METTL21AQ8WXB1 218 aa13.16□□□□□ -0.3
LINC00642-202ENST00000442515 RND1Q92730 232 aa13.16□□□□□ -0.3
LINC00642-202ENST00000442515 NAP1L5Q96NT1 182 aaPredicted RBP13.16□□□□□ -0.3
LINC00642-202ENST00000442515 RAB11FIP5Q9BXF6 653 aa13.16□□□□□ -0.3
LINC00642-202ENST00000442515 POLDIP3Q9BY77 421 aaKnown RBP13.16□□□□□ -0.3
LINC00642-202ENST00000442515 VN1R1Q9GZP7 353 aa13.16□□□□□ -0.3
LINC00642-202ENST00000442515 C10orf88Q9H8K7 445 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms