RNA–Protein interactions for RNA: ENST00000441542.6

HDAC9-214, Transcript of histone deacetylase 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HDAC9, Length 3,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-214ENST00000441542 COLEC11Q9BWP8 271 aa7.33□□□□□ -1.24
HDAC9-214ENST00000441542 SORBS1Q9BX66 1292 aaKnown RBP7.33□□□□□ -1.24
HDAC9-214ENST00000441542 R3HDMLQ9H3Y0 253 aa7.33□□□□□ -1.24
HDAC9-214ENST00000441542 DOCK5Q9H7D0 1870 aa7.33□□□□□ -1.24
HDAC9-214ENST00000441542 REEP1Q9H902 201 aa7.33□□□□□ -1.24
HDAC9-214ENST00000441542 SYTL2Q9HCH5 934 aa7.33□□□□□ -1.24
HDAC9-214ENST00000441542 ZNF277Q9NRM2 450 aaPredicted RBP7.33□□□□□ -1.24
HDAC9-214ENST00000441542 SLC25A37Q9NYZ2 338 aa7.33□□□□□ -1.24
HDAC9-214ENST00000441542 COMMD3Q9UBI1 195 aa7.33□□□□□ -1.24
HDAC9-214ENST00000441542 ZNF112Q9UJU3 913 aa7.33□□□□□ -1.24
HDAC9-214ENST00000441542 SCML1Q9UN30 329 aa7.33□□□□□ -1.24
HDAC9-214ENST00000441542 ALG5Q9Y673 324 aa7.33□□□□□ -1.24
HDAC9-214ENST00000441542 BPTFQ12830 3046 aa7.33□□□□□ -1.24
HDAC9-214ENST00000441542 A0A1B0GVC2 190 aa7.32□□□□□ -1.24
HDAC9-214ENST00000441542 FAM240BA0A1B0GVZ2 78 aa7.32□□□□□ -1.24
HDAC9-214ENST00000441542 A6NIN4 97 aa7.32□□□□□ -1.24
HDAC9-214ENST00000441542 CLDN24A6NM45 220 aa7.32□□□□□ -1.24
HDAC9-214ENST00000441542 H0YC42 278 aa7.32□□□□□ -1.24
HDAC9-214ENST00000441542 FZD9O00144 591 aa7.32□□□□□ -1.24
HDAC9-214ENST00000441542 STX7O15400 261 aaKnown RBP7.32□□□□□ -1.24
HDAC9-214ENST00000441542 NIPSNAP2O75323 286 aa7.32□□□□□ -1.24
HDAC9-214ENST00000441542 TOXO94900 526 aa7.32□□□□□ -1.24
HDAC9-214ENST00000441542 RPS19P39019 145 aaKnown RBP7.32□□□□□ -1.24
HDAC9-214ENST00000441542 FGFBP1Q14512 234 aa7.32□□□□□ -1.24
HDAC9-214ENST00000441542 ABRAXAS2Q15018 415 aa7.32□□□□□ -1.24
HDAC9-214ENST00000441542 PM20D1Q6GTS8 502 aa7.32□□□□□ -1.24
HDAC9-214ENST00000441542 CFAP77Q6ZQR2 320 aa7.32□□□□□ -1.24
HDAC9-214ENST00000441542 IDO2Q6ZQW0 420 aa7.32□□□□□ -1.24
HDAC9-214ENST00000441542 SLC51BQ86UW2 128 aa7.32□□□□□ -1.24
HDAC9-214ENST00000441542 TMC8Q8IU68 726 aa7.32□□□□□ -1.24
HDAC9-214ENST00000441542 ZDHHC17Q8IUH5 632 aa7.32□□□□□ -1.24
HDAC9-214ENST00000441542 GPR65Q8IYL9 337 aa7.32□□□□□ -1.24
HDAC9-214ENST00000441542 SLC34A3Q8N130 599 aa7.32□□□□□ -1.24
HDAC9-214ENST00000441542 AADATQ8N5Z0 425 aa7.32□□□□□ -1.24
HDAC9-214ENST00000441542 ANGPTL6Q8NI99 470 aa7.32□□□□□ -1.24
HDAC9-214ENST00000441542 PEX13Q92968 403 aa7.32□□□□□ -1.24
HDAC9-214ENST00000441542 RELTQ969Z4 430 aa7.32□□□□□ -1.24
HDAC9-214ENST00000441542 PYURFQ96I23 114 aa7.32□□□□□ -1.24
HDAC9-214ENST00000441542 RIPOR3Q96MK2 946 aa7.32□□□□□ -1.24
HDAC9-214ENST00000441542 EGFL8Q99944 293 aa7.32□□□□□ -1.24
HDAC9-214ENST00000441542 SLC22A4Q9H015 551 aa7.32□□□□□ -1.24
HDAC9-214ENST00000441542 CRISPLD1Q9H336 500 aa7.32□□□□□ -1.24
HDAC9-214ENST00000441542 NXF3Q9H4D5 531 aaKnown RBP7.32□□□□□ -1.24
HDAC9-214ENST00000441542 BPIFA1Q9NP55 256 aa7.32□□□□□ -1.24
HDAC9-214ENST00000441542 CCNB1IP1Q9NPC3 277 aa7.32□□□□□ -1.24
HDAC9-214ENST00000441542 THUMPD1Q9NXG2 353 aaKnown RBP7.32□□□□□ -1.24
HDAC9-214ENST00000441542 AFF4Q9UHB7 1163 aaKnown RBP7.32□□□□□ -1.24
HDAC9-214ENST00000441542 SLC9A8Q9Y2E8 581 aa7.32□□□□□ -1.24
HDAC9-214ENST00000441542 NAALAD2Q9Y3Q0 740 aa7.32□□□□□ -1.24
HDAC9-214ENST00000441542 RBBP6Q7Z6E9 1792 aaKnown RBP7.32□□□□□ -1.24
HDAC9-214ENST00000441542 LRRC72A6NJI9 287 aa7.32□□□□□ -1.24
HDAC9-214ENST00000441542 B4DXG7 233 aa7.32□□□□□ -1.24
HDAC9-214ENST00000441542 NT5C1B-RDH14C9J2C7 533 aa7.32□□□□□ -1.24
HDAC9-214ENST00000441542 DNAJB5O75953 348 aa7.32□□□□□ -1.24
HDAC9-214ENST00000441542 CDRT1O95170 752 aa7.32□□□□□ -1.24
HDAC9-214ENST00000441542 KIR2DL3P43628 341 aa7.32□□□□□ -1.24
HDAC9-214ENST00000441542 CSRP3P50461 194 aa7.32□□□□□ -1.24
HDAC9-214ENST00000441542 NPRL3Q12980 569 aa7.32□□□□□ -1.24
HDAC9-214ENST00000441542 CAMK2GQ13555 558 aaPredicted RBP7.32□□□□□ -1.24
HDAC9-214ENST00000441542 PTPRRQ15256 657 aa7.32□□□□□ -1.24
HDAC9-214ENST00000441542 PTPRNQ16849 979 aa7.32□□□□□ -1.24
HDAC9-214ENST00000441542 ALFQ53S48 1182 aa7.32□□□□□ -1.24
HDAC9-214ENST00000441542 DGKKQ5KSL6 1271 aa7.32□□□□□ -1.24
HDAC9-214ENST00000441542 WSCD1Q658N2 575 aa7.32□□□□□ -1.24
HDAC9-214ENST00000441542 GHDCQ8N2G8 530 aa7.32□□□□□ -1.24
HDAC9-214ENST00000441542 CARNMT1Q8N4J0 409 aa7.32□□□□□ -1.24
HDAC9-214ENST00000441542 EFHBQ8N7U6 833 aa7.32□□□□□ -1.24
HDAC9-214ENST00000441542 OR56A4Q8NGH8 313 aa7.32□□□□□ -1.24
HDAC9-214ENST00000441542 OR10T2Q8NGX3 314 aa7.32□□□□□ -1.24
HDAC9-214ENST00000441542 STAG3L4Q8TBR4 150 aa7.32□□□□□ -1.24
HDAC9-214ENST00000441542 EXOC2Q96KP1 924 aa7.32□□□□□ -1.24
HDAC9-214ENST00000441542 RDH12Q96NR8 316 aa7.32□□□□□ -1.24
HDAC9-214ENST00000441542 MGLLQ99685 303 aa7.32□□□□□ -1.24
HDAC9-214ENST00000441542 C1QTNF7Q9BXJ2 289 aa7.32□□□□□ -1.24
HDAC9-214ENST00000441542 MS4A7Q9GZW8 240 aaPredicted RBP7.32□□□□□ -1.24
HDAC9-214ENST00000441542 RNF121Q9H920 327 aa7.32□□□□□ -1.24
HDAC9-214ENST00000441542 TREX1Q9NSU2 369 aa7.32□□□□□ -1.24
HDAC9-214ENST00000441542 PRMT7Q9NVM4 692 aaPredicted RBP7.32□□□□□ -1.24
HDAC9-214ENST00000441542 MS4A12Q9NXJ0 267 aa7.32□□□□□ -1.24
HDAC9-214ENST00000441542 UXTQ9UBK9 157 aaPredicted RBP7.32□□□□□ -1.24
HDAC9-214ENST00000441542 TRMT6Q9UJA5 497 aaKnown RBP7.32□□□□□ -1.24
HDAC9-214ENST00000441542 PSME4Q14997 1843 aa7.32□□□□□ -1.24
HDAC9-214ENST00000441542 KLRG2A4D1S0 409 aaPredicted RBP7.31□□□□□ -1.24
HDAC9-214ENST00000441542 PRR23AA6NEV1 266 aa7.31□□□□□ -1.24
HDAC9-214ENST00000441542 J3KR12 359 aa7.31□□□□□ -1.24
HDAC9-214ENST00000441542 SLC16A6O15403 523 aa7.31□□□□□ -1.24
HDAC9-214ENST00000441542 CD3EAPO15446 510 aaKnown RBP7.31□□□□□ -1.24
HDAC9-214ENST00000441542 LZTS3O60299 673 aaPredicted RBP7.31□□□□□ -1.24
HDAC9-214ENST00000441542 GPX5O75715 221 aa7.31□□□□□ -1.24
HDAC9-214ENST00000441542 HRGP04196 525 aa7.31□□□□□ -1.24
HDAC9-214ENST00000441542 SYPP08247 313 aa7.31□□□□□ -1.24
HDAC9-214ENST00000441542 ZNF286BP0CG31 522 aa7.31□□□□□ -1.24
HDAC9-214ENST00000441542 OR1E2P47887 323 aa7.31□□□□□ -1.24
HDAC9-214ENST00000441542 HSPA7P48741 367 aa7.31□□□□□ -1.24
HDAC9-214ENST00000441542 MAN2A2P49641 1150 aa7.31□□□□□ -1.24
HDAC9-214ENST00000441542 SRP54P61011 504 aaKnown RBP7.31□□□□□ -1.24
HDAC9-214ENST00000441542 RPL6Q02878 288 aaKnown RBP7.31□□□□□ -1.24
HDAC9-214ENST00000441542 C2orf80Q0P641 193 aa7.31□□□□□ -1.24
HDAC9-214ENST00000441542 GRM7Q14831 915 aa7.31□□□□□ -1.24
HDAC9-214ENST00000441542 SNAPC1Q16533 368 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms