RNA–Protein interactions for RNA: ENST00000441310.6

PMS1-213, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-213ENST00000441310 FHP07954 510 aa16.33■□□□□ 0.2
PMS1-213ENST00000441310 ADORA3P0DMS8 318 aa16.33■□□□□ 0.2
PMS1-213ENST00000441310 ZNF250P15622 560 aa16.33■□□□□ 0.2
PMS1-213ENST00000441310 EFNA1P20827 205 aaPredicted RBP16.33■□□□□ 0.2
PMS1-213ENST00000441310 DNAJB2P25686 324 aa16.33■□□□□ 0.2
PMS1-213ENST00000441310 TIE1P35590 1138 aa16.33■□□□□ 0.2
PMS1-213ENST00000441310 RPS5P46782 204 aaKnown RBP16.33■□□□□ 0.2
PMS1-213ENST00000441310 GZMKP49863 264 aa16.33■□□□□ 0.2
PMS1-213ENST00000441310 HOXC5Q00444 222 aa16.33■□□□□ 0.2
PMS1-213ENST00000441310 ALDH6A1Q02252 535 aaKnown RBP16.33■□□□□ 0.2
PMS1-213ENST00000441310 PWP1Q13610 501 aa16.33■□□□□ 0.2
PMS1-213ENST00000441310 Q6ZPB1 254 aaPredicted RBP16.33■□□□□ 0.2
PMS1-213ENST00000441310 ZNF767PQ75MW2 155 aa16.33■□□□□ 0.2
PMS1-213ENST00000441310 DPP10Q8N608 796 aa16.33■□□□□ 0.2
PMS1-213ENST00000441310 OR4M2Q8NGB6 313 aa16.33■□□□□ 0.2
PMS1-213ENST00000441310 OR8H1Q8NGG4 311 aa16.33■□□□□ 0.2
PMS1-213ENST00000441310 PGAP3Q96FM1 320 aaPredicted RBP16.33■□□□□ 0.2
PMS1-213ENST00000441310 TSEN34Q9BSV6 310 aaKnown RBP16.33■□□□□ 0.2
PMS1-213ENST00000441310 ZIM2Q9NZV7 527 aa16.33■□□□□ 0.2
PMS1-213ENST00000441310 ERN1O75460 977 aaKnown RBP16.32■□□□□ 0.2
PMS1-213ENST00000441310 PRR35P0CG20 571 aa16.32■□□□□ 0.2
PMS1-213ENST00000441310 G6PDP11413 515 aa16.32■□□□□ 0.2
PMS1-213ENST00000441310 ICAM2P13598 275 aa16.32■□□□□ 0.2
PMS1-213ENST00000441310 ETV6P41212 452 aa16.32■□□□□ 0.2
PMS1-213ENST00000441310 SLC19A1P41440 591 aa16.32■□□□□ 0.2
PMS1-213ENST00000441310 HCAR3P49019 387 aa16.32■□□□□ 0.2
PMS1-213ENST00000441310 CTAG1AP78358 180 aa16.32■□□□□ 0.2
PMS1-213ENST00000441310 NFKB2Q00653 900 aa16.32■□□□□ 0.2
PMS1-213ENST00000441310 BNC1Q01954 994 aa16.32■□□□□ 0.2
PMS1-213ENST00000441310 RBBP7Q16576 425 aa16.32■□□□□ 0.2
PMS1-213ENST00000441310 FAM171A1Q5VUB5 890 aa16.32■□□□□ 0.2
PMS1-213ENST00000441310 SLC24A5Q71RS6 500 aa16.32■□□□□ 0.2
PMS1-213ENST00000441310 PLCZ1Q86YW0 608 aa16.32■□□□□ 0.2
PMS1-213ENST00000441310 ATG16L2Q8NAA4 619 aa16.32■□□□□ 0.2
PMS1-213ENST00000441310 TRMT61AQ96FX7 289 aaKnown RBP16.32■□□□□ 0.2
PMS1-213ENST00000441310 SLC39A8Q9C0K1 460 aa16.32■□□□□ 0.2
PMS1-213ENST00000441310 ZNF556Q9HAH1 456 aa16.32■□□□□ 0.2
PMS1-213ENST00000441310 SLC23A1Q9UHI7 598 aa16.32■□□□□ 0.2
PMS1-213ENST00000441310 PUS10Q3MIT2 529 aaKnown RBP16.32■□□□□ 0.2
PMS1-213ENST00000441310 CDH24Q86UP0 819 aa16.32■□□□□ 0.2
PMS1-213ENST00000441310 ZDHHC21Q8IVQ6 265 aa16.32■□□□□ 0.2
PMS1-213ENST00000441310 CHPFQ8IZ52 775 aa16.32■□□□□ 0.2
PMS1-213ENST00000441310 PGBD5Q8N414 524 aa16.32■□□□□ 0.2
PMS1-213ENST00000441310 NETO1Q8TDF5 533 aa16.32■□□□□ 0.2
PMS1-213ENST00000441310 FCGR1BQ92637 280 aa16.32■□□□□ 0.2
PMS1-213ENST00000441310 SH3KBP1Q96B97 665 aa16.32■□□□□ 0.2
PMS1-213ENST00000441310 MSANTD3Q96H12 275 aa16.32■□□□□ 0.2
PMS1-213ENST00000441310 FRMD6Q96NE9 622 aa16.32■□□□□ 0.2
PMS1-213ENST00000441310 STARD7Q9NQZ5 370 aa16.32■□□□□ 0.2
PMS1-213ENST00000441310 ABCB8Q9NUT2 735 aa16.32■□□□□ 0.2
PMS1-213ENST00000441310 PDP1Q9P0J1 537 aaPredicted RBP16.32■□□□□ 0.2
PMS1-213ENST00000441310 SNX7Q9UNH6 387 aa16.32■□□□□ 0.2
PMS1-213ENST00000441310 TSC2P49815 1807 aa16.32■□□□□ 0.2
PMS1-213ENST00000441310 MYLKQ15746 1914 aa16.32■□□□□ 0.2
PMS1-213ENST00000441310 PLD2O14939 933 aa16.32■□□□□ 0.2
PMS1-213ENST00000441310 NPPAP01160 153 aa16.32■□□□□ 0.2
PMS1-213ENST00000441310 PRLP01236 227 aa16.32■□□□□ 0.2
PMS1-213ENST00000441310 EFEMP1Q12805 493 aa16.32■□□□□ 0.2
PMS1-213ENST00000441310 GTDC1Q4AE62 458 aa16.32■□□□□ 0.2
PMS1-213ENST00000441310 ATPAF2Q8N5M1 289 aa16.32■□□□□ 0.2
PMS1-213ENST00000441310 AADATQ8N5Z0 425 aa16.32■□□□□ 0.2
PMS1-213ENST00000441310 APH1BQ8WW43 257 aa16.32■□□□□ 0.2
PMS1-213ENST00000441310 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.32■□□□□ 0.2
PMS1-213ENST00000441310 SMURF1Q9HCE7 757 aa16.32■□□□□ 0.2
PMS1-213ENST00000441310 ABCC13Q9NSE7 274 aa16.32■□□□□ 0.2
PMS1-213ENST00000441310 MARCH4Q9P2E8 410 aaPredicted RBP16.32■□□□□ 0.2
PMS1-213ENST00000441310 TRMT6Q9UJA5 497 aaKnown RBP16.32■□□□□ 0.2
PMS1-213ENST00000441310 TNFRSF10BO14763 440 aa16.31■□□□□ 0.2
PMS1-213ENST00000441310 PSMD3O43242 534 aa16.31■□□□□ 0.2
PMS1-213ENST00000441310 CREG1O75629 220 aa16.31■□□□□ 0.2
PMS1-213ENST00000441310 ZNF682O95780 498 aa16.31■□□□□ 0.2
PMS1-213ENST00000441310 CCR1P32246 355 aa16.31■□□□□ 0.2
PMS1-213ENST00000441310 AGTR2P50052 363 aa16.31■□□□□ 0.2
PMS1-213ENST00000441310 RPP38P78345 283 aaKnown RBP16.31■□□□□ 0.2
PMS1-213ENST00000441310 ELP6Q0PNE2 266 aa16.31■□□□□ 0.2
PMS1-213ENST00000441310 GRIK2Q13002 908 aa16.31■□□□□ 0.2
PMS1-213ENST00000441310 SHQ1Q6PI26 577 aaKnown RBP16.31■□□□□ 0.2
PMS1-213ENST00000441310 FBXO39Q8N4B4 442 aa16.31■□□□□ 0.2
PMS1-213ENST00000441310 C8orf48Q96LL4 319 aa16.31■□□□□ 0.2
PMS1-213ENST00000441310 CCDC115Q96NT0 180 aa16.31■□□□□ 0.2
PMS1-213ENST00000441310 SIGLEC11Q96RL6 698 aa16.31■□□□□ 0.2
PMS1-213ENST00000441310 MCCC1Q96RQ3 725 aaPredicted RBP16.31■□□□□ 0.2
PMS1-213ENST00000441310 EXOSC4Q9NPD3 245 aaKnown RBP16.31■□□□□ 0.2
PMS1-213ENST00000441310 DYRK4Q9NR20 520 aa16.31■□□□□ 0.2
PMS1-213ENST00000441310 KRT84Q9NSB2 600 aa16.31■□□□□ 0.2
PMS1-213ENST00000441310 SRRDQ9UH36 339 aa16.31■□□□□ 0.2
PMS1-213ENST00000441310 NDRG4Q9ULP0 352 aaKnown RBP16.31■□□□□ 0.2
PMS1-213ENST00000441310 ABCG2Q9UNQ0 655 aa16.31■□□□□ 0.2
PMS1-213ENST00000441310 HSPE1-MOB4S4R3N1 261 aa16.31■□□□□ 0.2
PMS1-213ENST00000441310 CIB4A0PJX0 185 aa16.31■□□□□ 0.2
PMS1-213ENST00000441310 HOXA9P31269 272 aa16.31■□□□□ 0.2
PMS1-213ENST00000441310 PRIM2P49643 509 aa16.31■□□□□ 0.2
PMS1-213ENST00000441310 ARHGDIAP52565 204 aa16.31■□□□□ 0.2
PMS1-213ENST00000441310 PLEKHM3Q6ZWE6 761 aa16.31■□□□□ 0.2
PMS1-213ENST00000441310 CAMKK1Q8N5S9 505 aa16.31■□□□□ 0.2
PMS1-213ENST00000441310 DBF4BQ8NFT6 615 aa16.31■□□□□ 0.2
PMS1-213ENST00000441310 CDK15Q96Q40 435 aa16.31■□□□□ 0.2
PMS1-213ENST00000441310 GPR62Q9BZJ7 368 aa16.31■□□□□ 0.2
PMS1-213ENST00000441310 SLC22A4Q9H015 551 aa16.31■□□□□ 0.2
PMS1-213ENST00000441310 FAM83DQ9H4H8 585 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms