RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 PNCKQ6P2M8 343 aa8.81□□□□□ -1
COPB1-202ENST00000439561 PTCHD4Q6ZW05 846 aa8.81□□□□□ -1
COPB1-202ENST00000439561 TSPYL5Q86VY4 417 aaPredicted RBP8.81□□□□□ -1
COPB1-202ENST00000439561 CADM2Q8N3J6 435 aa8.81□□□□□ -1
COPB1-202ENST00000439561 TTC9BQ8N6N2 239 aa8.81□□□□□ -1
COPB1-202ENST00000439561 TRIM63Q969Q1 353 aa8.81□□□□□ -1
COPB1-202ENST00000439561 MED8Q96G25 268 aa8.81□□□□□ -1
COPB1-202ENST00000439561 COPS8Q99627 209 aa8.81□□□□□ -1
COPB1-202ENST00000439561 OR2B2Q9GZK3 357 aa8.81□□□□□ -1
COPB1-202ENST00000439561 C11orf16Q9NQ32 467 aa8.81□□□□□ -1
COPB1-202ENST00000439561 SLC52A3Q9NQ40 469 aa8.81□□□□□ -1
COPB1-202ENST00000439561 TMEM248Q9NWD8 314 aa8.81□□□□□ -1
COPB1-202ENST00000439561 NUFIP1Q9UHK0 495 aaKnown RBP8.81□□□□□ -1
COPB1-202ENST00000439561 LYVE1Q9Y5Y7 322 aa8.81□□□□□ -1
COPB1-202ENST00000439561 ZFP37Q9Y6Q3 630 aaPredicted RBP8.81□□□□□ -1
COPB1-202ENST00000439561 METTL15A6NJ78 407 aa8.8□□□□□ -1
COPB1-202ENST00000439561 MAGEB17A8MXT2 336 aa8.8□□□□□ -1
COPB1-202ENST00000439561 H3BM21 787 aa8.8□□□□□ -1
COPB1-202ENST00000439561 OR7A17O14581 309 aa8.8□□□□□ -1
COPB1-202ENST00000439561 SLC16A6O15403 523 aa8.8□□□□□ -1
COPB1-202ENST00000439561 AP2A2O94973 939 aa8.8□□□□□ -1
COPB1-202ENST00000439561 RETP07949 1114 aa8.8□□□□□ -1
COPB1-202ENST00000439561 FHP07954 510 aa8.8□□□□□ -1
COPB1-202ENST00000439561 MAPK1P28482 360 aa8.8□□□□□ -1
COPB1-202ENST00000439561 RPL9P32969 192 aaKnown RBP8.8□□□□□ -1
COPB1-202ENST00000439561 KDELR2P33947 212 aa8.8□□□□□ -1
COPB1-202ENST00000439561 SNRPD2P62316 118 aaKnown RBP8.8□□□□□ -1
COPB1-202ENST00000439561 ACSM2AQ08AH3 577 aa8.8□□□□□ -1
COPB1-202ENST00000439561 MRPL28Q13084 256 aaKnown RBP8.8□□□□□ -1
COPB1-202ENST00000439561 PCBP1Q15365 356 aaKnown RBP eCLIP8.8□□□□□ -1
COPB1-202ENST00000439561 TTLL9Q3SXZ7 439 aa8.8□□□□□ -1
COPB1-202ENST00000439561 DGKKQ5KSL6 1271 aa8.8□□□□□ -1
COPB1-202ENST00000439561 RNF219Q5W0B1 726 aaPredicted RBP8.8□□□□□ -1
COPB1-202ENST00000439561 ACSM2BQ68CK6 577 aa8.8□□□□□ -1
COPB1-202ENST00000439561 ERAP2Q6P179 960 aa8.8□□□□□ -1
COPB1-202ENST00000439561 AGMOQ6ZNB7 445 aa8.8□□□□□ -1
COPB1-202ENST00000439561 CLECL1Q8IZS7 167 aa8.8□□□□□ -1
COPB1-202ENST00000439561 CACTIN-AS1Q8N1I8 211 aa8.8□□□□□ -1
COPB1-202ENST00000439561 C10orf111Q8N326 155 aa8.8□□□□□ -1
COPB1-202ENST00000439561 VPS37AQ8NEZ2 397 aa8.8□□□□□ -1
COPB1-202ENST00000439561 PJA1Q8NG27 643 aa8.8□□□□□ -1
COPB1-202ENST00000439561 OR10G2Q8NGC3 310 aa8.8□□□□□ -1
COPB1-202ENST00000439561 FCGR1BQ92637 280 aa8.8□□□□□ -1
COPB1-202ENST00000439561 PHF21AQ96BD5 680 aa8.8□□□□□ -1
COPB1-202ENST00000439561 RHBDF1Q96CC6 855 aa8.8□□□□□ -1
COPB1-202ENST00000439561 NEDD4LQ96PU5 975 aa8.8□□□□□ -1
COPB1-202ENST00000439561 YME1L1Q96TA2 773 aa8.8□□□□□ -1
COPB1-202ENST00000439561 TCF25Q9BQ70 676 aa8.8□□□□□ -1
COPB1-202ENST00000439561 DUSP21Q9H596 190 aa8.8□□□□□ -1
COPB1-202ENST00000439561 CCSER2Q9H7U1 834 aa8.8□□□□□ -1
COPB1-202ENST00000439561 CCDC177Q9NQR7 707 aaPredicted RBP8.8□□□□□ -1
COPB1-202ENST00000439561 MS4A12Q9NXJ0 267 aa8.8□□□□□ -1
COPB1-202ENST00000439561 RHCGQ9UBD6 479 aa8.8□□□□□ -1
COPB1-202ENST00000439561 AP3M1Q9Y2T2 418 aa8.8□□□□□ -1
COPB1-202ENST00000439561 GPSM3Q9Y4H4 160 aa8.8□□□□□ -1
COPB1-202ENST00000439561 MGAMO43451 1857 aa8.8□□□□□ -1
COPB1-202ENST00000439561 FAM172BPA6NC97 362 aa8.8□□□□□ -1
COPB1-202ENST00000439561 MGAT4DA6NG13 374 aa8.8□□□□□ -1
COPB1-202ENST00000439561 ZSCAN5BA6NJL1 495 aa8.8□□□□□ -1
COPB1-202ENST00000439561 KPNA5O15131 536 aa8.8□□□□□ -1
COPB1-202ENST00000439561 C9P02748 559 aa8.8□□□□□ -1
COPB1-202ENST00000439561 SLC10A3P09131 477 aa8.8□□□□□ -1
COPB1-202ENST00000439561 PTGER3P43115 390 aa8.8□□□□□ -1
COPB1-202ENST00000439561 RPIAP49247 311 aa8.8□□□□□ -1
COPB1-202ENST00000439561 SLC11A2P49281 568 aa8.8□□□□□ -1
COPB1-202ENST00000439561 DSC3Q14574 896 aa8.8□□□□□ -1
COPB1-202ENST00000439561 BCL2A1Q16548 175 aa8.8□□□□□ -1
COPB1-202ENST00000439561 PROX2Q3B8N5 592 aa8.8□□□□□ -1
COPB1-202ENST00000439561 ZNF792Q3KQV3 632 aa8.8□□□□□ -1
COPB1-202ENST00000439561 CTSL3PQ5NE16 218 aa8.8□□□□□ -1
COPB1-202ENST00000439561 ATG9BQ674R7 924 aa8.8□□□□□ -1
COPB1-202ENST00000439561 TYW3Q6IPR3 259 aaKnown RBP8.8□□□□□ -1
COPB1-202ENST00000439561 STK40Q8N2I9 435 aa8.8□□□□□ -1
COPB1-202ENST00000439561 OTULINQ96BN8 352 aa8.8□□□□□ -1
COPB1-202ENST00000439561 DIRAS2Q96HU8 199 aa8.8□□□□□ -1
COPB1-202ENST00000439561 THG1LQ9NWX6 298 aaKnown RBP8.8□□□□□ -1
COPB1-202ENST00000439561 CARD8Q9Y2G2 431 aa8.8□□□□□ -1
COPB1-202ENST00000439561 OR2A25A4D2G3 310 aa8.79□□□□□ -1
COPB1-202ENST00000439561 FAM25AB3EWG3 89 aa8.79□□□□□ -1
COPB1-202ENST00000439561 FAM25CB3EWG5 89 aa8.79□□□□□ -1
COPB1-202ENST00000439561 FAM25GB3EWG6 89 aa8.79□□□□□ -1
COPB1-202ENST00000439561 ANKRD66B4E2M5 251 aa8.79□□□□□ -1
COPB1-202ENST00000439561 PRAMEF11O60813 436 aa8.79□□□□□ -1
COPB1-202ENST00000439561 PDYNP01213 254 aa8.79□□□□□ -1
COPB1-202ENST00000439561 PTHP01270 115 aa8.79□□□□□ -1
COPB1-202ENST00000439561 PRR35P0CG20 571 aa8.79□□□□□ -1
COPB1-202ENST00000439561 ZFP36L2P47974 494 aaKnown RBP8.79□□□□□ -1
COPB1-202ENST00000439561 CPT1AP50416 773 aa8.79□□□□□ -1
COPB1-202ENST00000439561 YBEYP58557 167 aaPredicted RBP8.79□□□□□ -1
COPB1-202ENST00000439561 MRPS6P82932 125 aaKnown RBP8.79□□□□□ -1
COPB1-202ENST00000439561 IRF8Q02556 426 aa8.79□□□□□ -1
COPB1-202ENST00000439561 UPP1Q16831 310 aa8.79□□□□□ -1
COPB1-202ENST00000439561 LAIR1Q6GTX8 287 aa8.79□□□□□ -1
COPB1-202ENST00000439561 KLHL17Q6TDP4 642 aa8.79□□□□□ -1
COPB1-202ENST00000439561 PLEKHH3Q7Z736 793 aa8.79□□□□□ -1
COPB1-202ENST00000439561 LGI4Q8N135 537 aa8.79□□□□□ -1
COPB1-202ENST00000439561 C19orf18Q8NEA5 215 aa8.79□□□□□ -1
COPB1-202ENST00000439561 KLHDC9Q8NEP7 349 aa8.79□□□□□ -1
COPB1-202ENST00000439561 PIK3R3Q92569 461 aa8.79□□□□□ -1
COPB1-202ENST00000439561 KCNJ9Q92806 393 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms