RNA–Protein interactions for RNA: ENST00000439316.6

CLCNKA-203, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2 BASIC

Gene CLCNKA, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-203ENST00000439316 GALNT5Q7Z7M9 940 aa15.93■□□□□ 0.14
CLCNKA-203ENST00000439316 SERPINA11Q86U17 422 aa15.93■□□□□ 0.14
CLCNKA-203ENST00000439316 PGBD3Q8N328 593 aa15.93■□□□□ 0.14
CLCNKA-203ENST00000439316 OR2T29Q8NH02 315 aa15.93■□□□□ 0.14
CLCNKA-203ENST00000439316 RORBQ92753 470 aa15.93■□□□□ 0.14
CLCNKA-203ENST00000439316 YIPF6Q96EC8 236 aa15.93■□□□□ 0.14
CLCNKA-203ENST00000439316 ZNF641Q96N77 438 aaPredicted RBP15.93■□□□□ 0.14
CLCNKA-203ENST00000439316 NEURL2Q9BR09 285 aa15.93■□□□□ 0.14
CLCNKA-203ENST00000439316 IL1RAPQ9NPH3 570 aa15.93■□□□□ 0.14
CLCNKA-203ENST00000439316 ARL15Q9NXU5 204 aa15.93■□□□□ 0.14
CLCNKA-203ENST00000439316 SNX6Q9UNH7 406 aa15.93■□□□□ 0.14
CLCNKA-203ENST00000439316 TMED5Q9Y3A6 229 aa15.93■□□□□ 0.14
CLCNKA-203ENST00000439316 PCDHGA10Q9Y5H3 936 aa15.93■□□□□ 0.14
CLCNKA-203ENST00000439316 KPNA4O00629 521 aaPredicted RBP15.92■□□□□ 0.14
CLCNKA-203ENST00000439316 SCAMP3O14828 347 aaKnown RBP15.92■□□□□ 0.14
CLCNKA-203ENST00000439316 FMO3P31513 532 aa15.92■□□□□ 0.14
CLCNKA-203ENST00000439316 MAPK8P45983 427 aa15.92■□□□□ 0.14
CLCNKA-203ENST00000439316 CSNK1DP48730 415 aa15.92■□□□□ 0.14
CLCNKA-203ENST00000439316 RPIAP49247 311 aa15.92■□□□□ 0.14
CLCNKA-203ENST00000439316 ERVFC1P60507 584 aa15.92■□□□□ 0.14
CLCNKA-203ENST00000439316 SMAD3P84022 425 aaKnown RBP15.92■□□□□ 0.14
CLCNKA-203ENST00000439316 CDH18Q13634 790 aa15.92■□□□□ 0.14
CLCNKA-203ENST00000439316 OXA1LQ15070 435 aa15.92■□□□□ 0.14
CLCNKA-203ENST00000439316 PGS1Q32NB8 556 aa15.92■□□□□ 0.14
CLCNKA-203ENST00000439316 LAIR1Q6GTX8 287 aa15.92■□□□□ 0.14
CLCNKA-203ENST00000439316 DOK6Q6PKX4 331 aa15.92■□□□□ 0.14
CLCNKA-203ENST00000439316 SPRED2Q7Z698 418 aa15.92■□□□□ 0.14
CLCNKA-203ENST00000439316 BTLAQ7Z6A9 289 aa15.92■□□□□ 0.14
CLCNKA-203ENST00000439316 DNAJB7Q7Z6W7 309 aaPredicted RBP15.92■□□□□ 0.14
CLCNKA-203ENST00000439316 OR7A2PQ8NGA2 310 aa15.92■□□□□ 0.14
CLCNKA-203ENST00000439316 NELL1Q92832 810 aa15.92■□□□□ 0.14
CLCNKA-203ENST00000439316 TRMT2BQ96GJ1 504 aaKnown RBP15.92■□□□□ 0.14
CLCNKA-203ENST00000439316 ALPK1Q96QP1 1244 aa15.92■□□□□ 0.14
CLCNKA-203ENST00000439316 TCF25Q9BQ70 676 aa15.92■□□□□ 0.14
CLCNKA-203ENST00000439316 MROQ9BYG7 248 aa15.92■□□□□ 0.14
CLCNKA-203ENST00000439316 RIBC2Q9H4K1 309 aa15.92■□□□□ 0.14
CLCNKA-203ENST00000439316 ELOVL6Q9H5J4 265 aa15.92■□□□□ 0.14
CLCNKA-203ENST00000439316 NECTIN3Q9NQS3 549 aa15.92■□□□□ 0.14
CLCNKA-203ENST00000439316 THG1LQ9NWX6 298 aaKnown RBP15.92■□□□□ 0.14
CLCNKA-203ENST00000439316 TPRKBQ9Y3C4 175 aa15.92■□□□□ 0.14
CLCNKA-203ENST00000439316 CPQQ9Y646 472 aa15.92■□□□□ 0.14
CLCNKA-203ENST00000439316 DOCK6Q96HP0 2047 aa15.92■□□□□ 0.14
CLCNKA-203ENST00000439316 EIF3FO00303 357 aaPredicted RBP15.91■□□□□ 0.14
CLCNKA-203ENST00000439316 RFXANKO14593 260 aa15.91■□□□□ 0.14
CLCNKA-203ENST00000439316 ZNF682O95780 498 aa15.91■□□□□ 0.14
CLCNKA-203ENST00000439316 GKP32189 559 aa15.91■□□□□ 0.14
CLCNKA-203ENST00000439316 NSG1P42857 185 aa15.91■□□□□ 0.14
CLCNKA-203ENST00000439316 EPHB3P54753 998 aa15.91■□□□□ 0.14
CLCNKA-203ENST00000439316 MTAPQ13126 283 aa15.91■□□□□ 0.14
CLCNKA-203ENST00000439316 GBX1Q14549 363 aa15.91■□□□□ 0.14
CLCNKA-203ENST00000439316 CYP2A13Q16696 494 aa15.91■□□□□ 0.14
CLCNKA-203ENST00000439316 ZXDCQ2QGD7 858 aaPredicted RBP15.91■□□□□ 0.14
CLCNKA-203ENST00000439316 ADPRMQ3LIE5 342 aa15.91■□□□□ 0.14
CLCNKA-203ENST00000439316 RETSATQ6NUM9 610 aa15.91■□□□□ 0.14
CLCNKA-203ENST00000439316 SLCO6A1Q86UG4 719 aa15.91■□□□□ 0.14
CLCNKA-203ENST00000439316 APCDD1Q8J025 514 aa15.91■□□□□ 0.14
CLCNKA-203ENST00000439316 TCAIMQ8N3R3 496 aa15.91■□□□□ 0.14
CLCNKA-203ENST00000439316 L3MBTL4Q8NA19 623 aa15.91■□□□□ 0.14
CLCNKA-203ENST00000439316 S100ZQ8WXG8 99 aa15.91■□□□□ 0.14
CLCNKA-203ENST00000439316 MTIF3Q9H2K0 278 aaKnown RBP15.91■□□□□ 0.14
CLCNKA-203ENST00000439316 PLXNB3Q9ULL4 1909 aa15.91■□□□□ 0.14
CLCNKA-203ENST00000439316 LINC01553A4QN01 128 aa15.91■□□□□ 0.14
CLCNKA-203ENST00000439316 GREM1O60565 184 aa15.91■□□□□ 0.14
CLCNKA-203ENST00000439316 MYOGP15173 224 aa15.91■□□□□ 0.14
CLCNKA-203ENST00000439316 FPR1P21462 350 aa15.91■□□□□ 0.14
CLCNKA-203ENST00000439316 FSHRP23945 695 aa15.91■□□□□ 0.14
CLCNKA-203ENST00000439316 TPP2P29144 1249 aaPredicted RBP15.91■□□□□ 0.14
CLCNKA-203ENST00000439316 MAP2K4P45985 399 aa15.91■□□□□ 0.14
CLCNKA-203ENST00000439316 SLC6A12P48065 614 aa15.91■□□□□ 0.14
CLCNKA-203ENST00000439316 MASP1P48740 699 aa15.91■□□□□ 0.14
CLCNKA-203ENST00000439316 NEK2P51955 445 aa15.91■□□□□ 0.14
CLCNKA-203ENST00000439316 PTPN5P54829 565 aa15.91■□□□□ 0.14
CLCNKA-203ENST00000439316 SIM2Q14190 667 aaPredicted RBP15.91■□□□□ 0.14
CLCNKA-203ENST00000439316 NPTX1Q15818 432 aa15.91■□□□□ 0.14
CLCNKA-203ENST00000439316 TRIM16LQ309B1 348 aa15.91■□□□□ 0.14
CLCNKA-203ENST00000439316 SYT6Q5T7P8 510 aaPredicted RBP15.91■□□□□ 0.14
CLCNKA-203ENST00000439316 TSPAN33Q86UF1 283 aa15.91■□□□□ 0.14
CLCNKA-203ENST00000439316 ZSWIM9Q86XI8 627 aa15.91■□□□□ 0.14
CLCNKA-203ENST00000439316 GPR26Q8NDV2 337 aa15.91■□□□□ 0.14
CLCNKA-203ENST00000439316 APIPQ96GX9 242 aa15.91■□□□□ 0.14
CLCNKA-203ENST00000439316 FCRL1Q96LA6 429 aa15.91■□□□□ 0.14
CLCNKA-203ENST00000439316 LYSMD1Q96S90 227 aa15.91■□□□□ 0.14
CLCNKA-203ENST00000439316 C2orf49Q9BVC5 232 aaPredicted RBP15.91■□□□□ 0.14
CLCNKA-203ENST00000439316 ARMC7Q9H6L4 198 aa15.91■□□□□ 0.14
CLCNKA-203ENST00000439316 AASDHPPTQ9NRN7 309 aa15.91■□□□□ 0.14
CLCNKA-203ENST00000439316 TRNAU1APQ9NX07 287 aaKnown RBP15.91■□□□□ 0.14
CLCNKA-203ENST00000439316 ZDHHC3Q9NYG2 299 aa15.91■□□□□ 0.14
CLCNKA-203ENST00000439316 TRANK1O15050 2925 aa15.9■□□□□ 0.14
CLCNKA-203ENST00000439316 SERTM1A2A2V5 107 aa15.9■□□□□ 0.14
CLCNKA-203ENST00000439316 HIDE1A8MVS5 230 aa15.9■□□□□ 0.14
CLCNKA-203ENST00000439316 MAN1A2O60476 641 aa15.9■□□□□ 0.14
CLCNKA-203ENST00000439316 CYP4B1P13584 511 aa15.9■□□□□ 0.14
CLCNKA-203ENST00000439316 AMD1P17707 334 aa15.9■□□□□ 0.14
CLCNKA-203ENST00000439316 DNAJA1P31689 397 aaKnown RBP15.9■□□□□ 0.14
CLCNKA-203ENST00000439316 CCR7P32248 378 aa15.9■□□□□ 0.14
CLCNKA-203ENST00000439316 KIR3DL1P43629 444 aa15.9■□□□□ 0.14
CLCNKA-203ENST00000439316 TRPC1P48995 793 aa15.9■□□□□ 0.14
CLCNKA-203ENST00000439316 B4GALNT1Q00973 533 aa15.9■□□□□ 0.14
CLCNKA-203ENST00000439316 GTF2H3Q13889 308 aa15.9■□□□□ 0.14
CLCNKA-203ENST00000439316 LAPTM4AQ15012 233 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms