RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 TCRBV9S1A1TA0A576 114 aa23.67■■□□□ 1.38
RAPGEF1-206ENST00000438647 DSCR3O14972 297 aa23.67■■□□□ 1.38
RAPGEF1-206ENST00000438647 ENO2P09104 434 aaPredicted RBP23.67■■□□□ 1.38
RAPGEF1-206ENST00000438647 EZRP15311 586 aaKnown RBP23.67■■□□□ 1.38
RAPGEF1-206ENST00000438647 ZNF37AP17032 561 aaPredicted RBP23.67■■□□□ 1.38
RAPGEF1-206ENST00000438647 HRH2P25021 359 aa23.67■■□□□ 1.38
RAPGEF1-206ENST00000438647 TBPL1P62380 186 aa23.67■■□□□ 1.38
RAPGEF1-206ENST00000438647 YBX1P67809 324 aaKnown RBP23.67■■□□□ 1.38
RAPGEF1-206ENST00000438647 RELAQ04206 551 aa23.67■■□□□ 1.38
RAPGEF1-206ENST00000438647 WASHC2DQ5SRD0 308 aa23.67■■□□□ 1.38
RAPGEF1-206ENST00000438647 ZNF425Q6IV72 752 aa23.67■■□□□ 1.38
RAPGEF1-206ENST00000438647 ZDHHC24Q6UX98 284 aa23.67■■□□□ 1.38
RAPGEF1-206ENST00000438647 ADCK2Q7Z695 626 aa23.67■■□□□ 1.38
RAPGEF1-206ENST00000438647 PAQR7Q86WK9 346 aa23.67■■□□□ 1.38
RAPGEF1-206ENST00000438647 NKAPQ8N5F7 415 aaKnown RBP23.67■■□□□ 1.38
RAPGEF1-206ENST00000438647 STARD5Q9NSY2 213 aa23.67■■□□□ 1.38
RAPGEF1-206ENST00000438647 BSNQ9UPA5 3926 aa23.66■■□□□ 1.38
RAPGEF1-206ENST00000438647 IGKV1-8A0A0C4DH67 115 aa23.66■■□□□ 1.38
RAPGEF1-206ENST00000438647 PMS2P54278 862 aa23.66■■□□□ 1.38
RAPGEF1-206ENST00000438647 SLC12A2P55011 1212 aa23.66■■□□□ 1.38
RAPGEF1-206ENST00000438647 SLC7A5Q01650 507 aa23.66■■□□□ 1.38
RAPGEF1-206ENST00000438647 PHKG1Q16816 387 aa23.66■■□□□ 1.38
RAPGEF1-206ENST00000438647 PRAMEF13Q5VWM6 474 aa23.66■■□□□ 1.38
RAPGEF1-206ENST00000438647 FRMPD2BQ6IN97 320 aa23.66■■□□□ 1.38
RAPGEF1-206ENST00000438647 AGTRAPQ6RW13 159 aa23.66■■□□□ 1.38
RAPGEF1-206ENST00000438647 ANKRD7Q92527 254 aa23.66■■□□□ 1.38
RAPGEF1-206ENST00000438647 CPNE1Q99829 537 aa23.66■■□□□ 1.38
RAPGEF1-206ENST00000438647 LRRC1Q9BTT6 524 aa23.66■■□□□ 1.38
RAPGEF1-206ENST00000438647 POPDC3Q9HBV1 291 aa23.66■■□□□ 1.38
RAPGEF1-206ENST00000438647 ARL15Q9NXU5 204 aa23.66■■□□□ 1.38
RAPGEF1-206ENST00000438647 B8ZZF3 427 aa23.65■■□□□ 1.38
RAPGEF1-206ENST00000438647 NRP2O60462 931 aa23.65■■□□□ 1.38
RAPGEF1-206ENST00000438647 EIF2S1P05198 315 aaKnown RBP23.65■■□□□ 1.38
RAPGEF1-206ENST00000438647 MAGEA4P43358 317 aa23.65■■□□□ 1.38
RAPGEF1-206ENST00000438647 NFKB2Q00653 900 aa23.65■■□□□ 1.38
RAPGEF1-206ENST00000438647 POU4F1Q01851 419 aa23.65■■□□□ 1.38
RAPGEF1-206ENST00000438647 NFATC3Q12968 1075 aa23.65■■□□□ 1.38
RAPGEF1-206ENST00000438647 TRADDQ15628 312 aa23.65■■□□□ 1.38
RAPGEF1-206ENST00000438647 FBXO42Q6P3S6 717 aa23.65■■□□□ 1.38
RAPGEF1-206ENST00000438647 RAB43Q86YS6 212 aa23.65■■□□□ 1.38
RAPGEF1-206ENST00000438647 APLFQ8IW19 511 aaPredicted RBP23.65■■□□□ 1.38
RAPGEF1-206ENST00000438647 C9orf43Q8TAL5 461 aaPredicted RBP23.65■■□□□ 1.38
RAPGEF1-206ENST00000438647 ADAMTS17Q8TE56 1095 aa23.65■■□□□ 1.38
RAPGEF1-206ENST00000438647 ATL1Q8WXF7 558 aa23.65■■□□□ 1.38
RAPGEF1-206ENST00000438647 RERGQ96A58 199 aaPredicted RBP23.65■■□□□ 1.38
RAPGEF1-206ENST00000438647 FKBP10Q96AY3 582 aa23.65■■□□□ 1.38
RAPGEF1-206ENST00000438647 MCMBPQ9BTE3 642 aa23.65■■□□□ 1.38
RAPGEF1-206ENST00000438647 SMYD2Q9NRG4 433 aa23.65■■□□□ 1.38
RAPGEF1-206ENST00000438647 SPTA1P02549 2419 aa23.64■■□□□ 1.38
RAPGEF1-206ENST00000438647 HYKKA2RU49 373 aa23.64■■□□□ 1.37
RAPGEF1-206ENST00000438647 FAM159BA6NKW6 160 aa23.64■■□□□ 1.37
RAPGEF1-206ENST00000438647 H0YGG7 62 aa23.64■■□□□ 1.37
RAPGEF1-206ENST00000438647 MKRN2OSH3BPM6 223 aa23.64■■□□□ 1.37
RAPGEF1-206ENST00000438647 RFPL1O75677 317 aa23.64■■□□□ 1.37
RAPGEF1-206ENST00000438647 STX2P32856 288 aa23.64■■□□□ 1.37
RAPGEF1-206ENST00000438647 GP5P40197 560 aa23.64■■□□□ 1.37
RAPGEF1-206ENST00000438647 FOLR3P41439 243 aa23.64■■□□□ 1.37
RAPGEF1-206ENST00000438647 PGGT1BP53609 377 aa23.64■■□□□ 1.37
RAPGEF1-206ENST00000438647 TAS2R39P59534 338 aa23.64■■□□□ 1.37
RAPGEF1-206ENST00000438647 ARF3P61204 181 aaPredicted RBP23.64■■□□□ 1.37
RAPGEF1-206ENST00000438647 NAE1Q13564 534 aa23.64■■□□□ 1.37
RAPGEF1-206ENST00000438647 SLC9A5Q14940 896 aa23.64■■□□□ 1.37
RAPGEF1-206ENST00000438647 MUM1Q2TAK8 710 aa23.64■■□□□ 1.37
RAPGEF1-206ENST00000438647 MBOAT1Q6ZNC8 495 aa23.64■■□□□ 1.37
RAPGEF1-206ENST00000438647 ZNF605Q86T29 641 aa23.64■■□□□ 1.37
RAPGEF1-206ENST00000438647 MMGT1Q8N4V1 131 aa23.64■■□□□ 1.37
RAPGEF1-206ENST00000438647 TSPAN17Q96FV3 270 aa23.64■■□□□ 1.37
RAPGEF1-206ENST00000438647 IP6K3Q96PC2 410 aa23.64■■□□□ 1.37
RAPGEF1-206ENST00000438647 FAM129AQ9BZQ8 928 aa23.64■■□□□ 1.37
RAPGEF1-206ENST00000438647 ATG10Q9H0Y0 220 aa23.64■■□□□ 1.37
RAPGEF1-206ENST00000438647 GPAMQ9HCL2 828 aa23.64■■□□□ 1.37
RAPGEF1-206ENST00000438647 TMEM184CQ9NVA4 438 aa23.64■■□□□ 1.37
RAPGEF1-206ENST00000438647 NOVA2Q9UNW9 492 aaKnown RBP23.64■■□□□ 1.37
RAPGEF1-206ENST00000438647 FER1L5A0AVI2 2057 aa23.63■■□□□ 1.37
RAPGEF1-206ENST00000438647 LOC105369274A0A096LPK9 316 aa23.63■■□□□ 1.37
RAPGEF1-206ENST00000438647 LOC102723532A0A0G2JNH3 316 aa23.63■■□□□ 1.37
RAPGEF1-206ENST00000438647 ESYT3A0FGR9 886 aa23.63■■□□□ 1.37
RAPGEF1-206ENST00000438647 CTAGE15A4D2H0 777 aa23.63■■□□□ 1.37
RAPGEF1-206ENST00000438647 TXNDC9O14530 226 aa23.63■■□□□ 1.37
RAPGEF1-206ENST00000438647 KLF7O75840 302 aaPredicted RBP23.63■■□□□ 1.37
RAPGEF1-206ENST00000438647 ONECUT2O95948 504 aa23.63■■□□□ 1.37
RAPGEF1-206ENST00000438647 ALBP02768 609 aa23.63■■□□□ 1.37
RAPGEF1-206ENST00000438647 CTAGE8P0CG41 777 aa23.63■■□□□ 1.37
RAPGEF1-206ENST00000438647 EMP3P54852 163 aa23.63■■□□□ 1.37
RAPGEF1-206ENST00000438647 GPX6P59796 221 aa23.63■■□□□ 1.37
RAPGEF1-206ENST00000438647 GUCY2DQ02846 1103 aa23.63■■□□□ 1.37
RAPGEF1-206ENST00000438647 SSPNQ14714 243 aa23.63■■□□□ 1.37
RAPGEF1-206ENST00000438647 CAPN13Q6MZZ7 669 aaPredicted RBP23.63■■□□□ 1.37
RAPGEF1-206ENST00000438647 MRPL14Q6P1L8 145 aaKnown RBP23.63■■□□□ 1.37
RAPGEF1-206ENST00000438647 CEP128Q6ZU80 1094 aa23.63■■□□□ 1.37
RAPGEF1-206ENST00000438647 CTAGE6Q86UF2 777 aa23.63■■□□□ 1.37
RAPGEF1-206ENST00000438647 C17orf64Q86WR6 236 aa23.63■■□□□ 1.37
RAPGEF1-206ENST00000438647 CTAGE4Q8IX94 777 aa23.63■■□□□ 1.37
RAPGEF1-206ENST00000438647 CTAGE3PQ8IX95 158 aa23.63■■□□□ 1.37
RAPGEF1-206ENST00000438647 OR4N4Q8N0Y3 316 aa23.63■■□□□ 1.37
RAPGEF1-206ENST00000438647 OR2Y1Q8NGV0 311 aa23.63■■□□□ 1.37
RAPGEF1-206ENST00000438647 KIF18AQ8NI77 898 aa23.63■■□□□ 1.37
RAPGEF1-206ENST00000438647 SGPP1Q9BX95 441 aa23.63■■□□□ 1.37
RAPGEF1-206ENST00000438647 PTRH2Q9Y3E5 179 aaKnown RBP23.63■■□□□ 1.37
RAPGEF1-206ENST00000438647 HEMK1Q9Y5R4 338 aaPredicted RBP23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms