RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 INPP5KQ9BT40 448 aa3.28□□□□□ -1.88
TRAPPC13-204ENST00000438419 SLC2A11Q9BYW1 496 aa3.28□□□□□ -1.88
TRAPPC13-204ENST00000438419 MTMR12Q9C0I1 747 aa3.28□□□□□ -1.88
TRAPPC13-204ENST00000438419 CPVLQ9H3G5 476 aa3.28□□□□□ -1.88
TRAPPC13-204ENST00000438419 DNAJC4Q9NNZ3 241 aa3.28□□□□□ -1.88
TRAPPC13-204ENST00000438419 ZNF71Q9NQZ8 489 aaPredicted RBP3.28□□□□□ -1.88
TRAPPC13-204ENST00000438419 FAM207AQ9NSI2 230 aaPredicted RBP3.28□□□□□ -1.88
TRAPPC13-204ENST00000438419 INTS9Q9NV88 658 aaKnown RBP3.28□□□□□ -1.88
TRAPPC13-204ENST00000438419 TXNDC16Q9P2K2 825 aa3.28□□□□□ -1.88
TRAPPC13-204ENST00000438419 ERRFI1Q9UJM3 462 aaPredicted RBP3.28□□□□□ -1.88
TRAPPC13-204ENST00000438419 STUB1Q9UNE7 303 aa3.28□□□□□ -1.88
TRAPPC13-204ENST00000438419 KIF26BQ2KJY2 2108 aa3.28□□□□□ -1.88
TRAPPC13-204ENST00000438419 IGHV4-4A0A075B6R2 117 aa3.27□□□□□ -1.89
TRAPPC13-204ENST00000438419 A0A1W2PPK0 400 aa3.27□□□□□ -1.89
TRAPPC13-204ENST00000438419 A0A1W2PPW3 197 aa3.27□□□□□ -1.89
TRAPPC13-204ENST00000438419 O00370 1275 aa3.27□□□□□ -1.89
TRAPPC13-204ENST00000438419 AP2A2O94973 939 aa3.27□□□□□ -1.89
TRAPPC13-204ENST00000438419 GAS8-AS1O95177 125 aa3.27□□□□□ -1.89
TRAPPC13-204ENST00000438419 HMBSP08397 361 aa3.27□□□□□ -1.89
TRAPPC13-204ENST00000438419 CEACAM1P13688 526 aa3.27□□□□□ -1.89
TRAPPC13-204ENST00000438419 MYL6BP14649 208 aa3.27□□□□□ -1.89
TRAPPC13-204ENST00000438419 LBPP18428 481 aa3.27□□□□□ -1.89
TRAPPC13-204ENST00000438419 CASTP20810 708 aaKnown RBP3.27□□□□□ -1.89
TRAPPC13-204ENST00000438419 KRT2P35908 639 aa3.27□□□□□ -1.89
TRAPPC13-204ENST00000438419 RPL21P46778 160 aaKnown RBP3.27□□□□□ -1.89
TRAPPC13-204ENST00000438419 KCNJ1P48048 391 aa3.27□□□□□ -1.89
TRAPPC13-204ENST00000438419 ATP12AP54707 1039 aa3.27□□□□□ -1.89
TRAPPC13-204ENST00000438419 NAGLUP54802 743 aa3.27□□□□□ -1.89
TRAPPC13-204ENST00000438419 GSDMDP57764 484 aa3.27□□□□□ -1.89
TRAPPC13-204ENST00000438419 DLK1P80370 383 aa3.27□□□□□ -1.89
TRAPPC13-204ENST00000438419 TAF10Q12962 218 aa3.27□□□□□ -1.89
TRAPPC13-204ENST00000438419 SLMAPQ14BN4 828 aa3.27□□□□□ -1.89
TRAPPC13-204ENST00000438419 NPTX1Q15818 432 aa3.27□□□□□ -1.89
TRAPPC13-204ENST00000438419 MRGPRG-AS1Q2M3A8 158 aa3.27□□□□□ -1.89
TRAPPC13-204ENST00000438419 LACTB2Q53H82 288 aaPredicted RBP3.27□□□□□ -1.89
TRAPPC13-204ENST00000438419 SLC35D3Q5M8T2 416 aa3.27□□□□□ -1.89
TRAPPC13-204ENST00000438419 FFAR4Q5NUL3 377 aa3.27□□□□□ -1.89
TRAPPC13-204ENST00000438419 TMEM182Q6ZP80 229 aaPredicted RBP3.27□□□□□ -1.89
TRAPPC13-204ENST00000438419 HOOK3Q86VS8 718 aa3.27□□□□□ -1.89
TRAPPC13-204ENST00000438419 MMD2Q8IY49 270 aa3.27□□□□□ -1.89
TRAPPC13-204ENST00000438419 EID3Q8N140 333 aa3.27□□□□□ -1.89
TRAPPC13-204ENST00000438419 NUP93Q8N1F7 819 aa3.27□□□□□ -1.89
TRAPPC13-204ENST00000438419 NIPA2Q8N8Q9 360 aa3.27□□□□□ -1.89
TRAPPC13-204ENST00000438419 BMPERQ8N8U9 685 aa3.27□□□□□ -1.89
TRAPPC13-204ENST00000438419 KBTBD8Q8NFY9 601 aa3.27□□□□□ -1.89
TRAPPC13-204ENST00000438419 OR13C3Q8NGS6 347 aa3.27□□□□□ -1.89
TRAPPC13-204ENST00000438419 OR2T11Q8NH01 316 aa3.27□□□□□ -1.89
TRAPPC13-204ENST00000438419 OCC1Q8TAD7 63 aa3.27□□□□□ -1.89
TRAPPC13-204ENST00000438419 C9orf43Q8TAL5 461 aaPredicted RBP3.27□□□□□ -1.89
TRAPPC13-204ENST00000438419 ERO1AQ96HE7 468 aa3.27□□□□□ -1.89
TRAPPC13-204ENST00000438419 OR2B2Q9GZK3 357 aa3.27□□□□□ -1.89
TRAPPC13-204ENST00000438419 C2orf40Q9H1Z8 148 aa3.27□□□□□ -1.89
TRAPPC13-204ENST00000438419 SNX25Q9H3E2 840 aa3.27□□□□□ -1.89
TRAPPC13-204ENST00000438419 MMADHCQ9H3L0 296 aaPredicted RBP3.27□□□□□ -1.89
TRAPPC13-204ENST00000438419 Q9H8V8 135 aa3.27□□□□□ -1.89
TRAPPC13-204ENST00000438419 CHST11Q9NPF2 352 aa3.27□□□□□ -1.89
TRAPPC13-204ENST00000438419 SCRT2Q9NQ03 307 aa3.27□□□□□ -1.89
TRAPPC13-204ENST00000438419 P4HTMQ9NXG6 502 aa3.27□□□□□ -1.89
TRAPPC13-204ENST00000438419 SEPT10Q9P0V9 454 aa3.27□□□□□ -1.89
TRAPPC13-204ENST00000438419 WDR83OSQ9Y284 106 aa3.27□□□□□ -1.89
TRAPPC13-204ENST00000438419 A0A087WW49 117 aa3.27□□□□□ -1.89
TRAPPC13-204ENST00000438419 PI4K2BG5E9Z4 385 aa3.27□□□□□ -1.89
TRAPPC13-204ENST00000438419 STX6O43752 255 aa3.27□□□□□ -1.89
TRAPPC13-204ENST00000438419 ZG16O60844 167 aa3.27□□□□□ -1.89
TRAPPC13-204ENST00000438419 RPS6KA5O75582 802 aa3.27□□□□□ -1.89
TRAPPC13-204ENST00000438419 CDC123O75794 336 aaPredicted RBP3.27□□□□□ -1.89
TRAPPC13-204ENST00000438419 LUC7L3O95232 432 aaKnown RBP3.27□□□□□ -1.89
TRAPPC13-204ENST00000438419 PGLSO95336 258 aa3.27□□□□□ -1.89
TRAPPC13-204ENST00000438419 SIX3O95343 332 aaPredicted RBP3.27□□□□□ -1.89
TRAPPC13-204ENST00000438419 IGLV1-44P01699 117 aa3.27□□□□□ -1.89
TRAPPC13-204ENST00000438419 RLN1P04808 185 aa3.27□□□□□ -1.89
TRAPPC13-204ENST00000438419 GPIP06744 558 aa3.27□□□□□ -1.89
TRAPPC13-204ENST00000438419 RNF224P0DH78 156 aa3.27□□□□□ -1.89
TRAPPC13-204ENST00000438419 CSTF2P33240 577 aaKnown RBP eCLIP3.27□□□□□ -1.89
TRAPPC13-204ENST00000438419 TCF7P36402 384 aaPredicted RBP3.27□□□□□ -1.89
TRAPPC13-204ENST00000438419 HSD17B3P37058 310 aa3.27□□□□□ -1.89
TRAPPC13-204ENST00000438419 MTCP1P56278 107 aa3.27□□□□□ -1.89
TRAPPC13-204ENST00000438419 PTENP60484 403 aa3.27□□□□□ -1.89
TRAPPC13-204ENST00000438419 TNK1Q13470 666 aa3.27□□□□□ -1.89
TRAPPC13-204ENST00000438419 ZNF674Q2M3X9 581 aa3.27□□□□□ -1.89
TRAPPC13-204ENST00000438419 CTU2Q2VPK5 515 aaKnown RBP3.27□□□□□ -1.89
TRAPPC13-204ENST00000438419 PSRC1Q6PGN9 363 aaPredicted RBP3.27□□□□□ -1.89
TRAPPC13-204ENST00000438419 NRARPQ7Z6K4 114 aa3.27□□□□□ -1.89
TRAPPC13-204ENST00000438419 KIRREL3Q8IZU9 778 aa3.27□□□□□ -1.89
TRAPPC13-204ENST00000438419 LGI2Q8N0V4 545 aa3.27□□□□□ -1.89
TRAPPC13-204ENST00000438419 LSMEM2Q8N112 164 aa3.27□□□□□ -1.89
TRAPPC13-204ENST00000438419 ZNF713Q8N859 430 aaPredicted RBP3.27□□□□□ -1.89
TRAPPC13-204ENST00000438419 NHLRC2Q8NBF2 726 aa3.27□□□□□ -1.89
TRAPPC13-204ENST00000438419 ATAD1Q8NBU5 361 aa3.27□□□□□ -1.89
TRAPPC13-204ENST00000438419 ADAD2Q8NCV1 583 aaKnown RBP3.27□□□□□ -1.89
TRAPPC13-204ENST00000438419 ZNF248Q8NDW4 579 aa3.27□□□□□ -1.89
TRAPPC13-204ENST00000438419 DDHD1Q8NEL9 900 aa3.27□□□□□ -1.89
TRAPPC13-204ENST00000438419 OR4K1Q8NGD4 311 aa3.27□□□□□ -1.89
TRAPPC13-204ENST00000438419 OR4C3Q8NH37 302 aa3.27□□□□□ -1.89
TRAPPC13-204ENST00000438419 CTCFLQ8NI51 663 aaPredicted RBP3.27□□□□□ -1.89
TRAPPC13-204ENST00000438419 PIGBQ92521 554 aa3.27□□□□□ -1.89
TRAPPC13-204ENST00000438419 FAM71F1Q96KD3 344 aaPredicted RBP3.27□□□□□ -1.89
TRAPPC13-204ENST00000438419 MINDY3Q9H8M7 445 aa3.27□□□□□ -1.89
TRAPPC13-204ENST00000438419 PPANQ9NQ55 473 aaKnown RBP3.27□□□□□ -1.89
TRAPPC13-204ENST00000438419 CWC25Q9NXE8 425 aaPredicted RBP3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms