RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 TNPO3Q9Y5L0 923 aaKnown RBP6.81□□□□□ -1.32
LSM3P3-201ENST00000436601 R4GN57 208 aa6.81□□□□□ -1.32
LSM3P3-201ENST00000436601 LRRK1Q38SD2 2015 aa6.81□□□□□ -1.32
LSM3P3-201ENST00000436601 E7ENX8 843 aa6.8□□□□□ -1.32
LSM3P3-201ENST00000436601 LMO7DNF2Z398 122 aa6.8□□□□□ -1.32
LSM3P3-201ENST00000436601 K7EPI3 171 aa6.8□□□□□ -1.32
LSM3P3-201ENST00000436601 OR7A17O14581 309 aa6.8□□□□□ -1.32
LSM3P3-201ENST00000436601 CCNT2O60583 730 aaKnown RBP6.8□□□□□ -1.32
LSM3P3-201ENST00000436601 PRAMEF4O60810 478 aa6.8□□□□□ -1.32
LSM3P3-201ENST00000436601 PIAS2O75928 621 aa6.8□□□□□ -1.32
LSM3P3-201ENST00000436601 HSPA4LO95757 839 aa6.8□□□□□ -1.32
LSM3P3-201ENST00000436601 CFIP05156 583 aa6.8□□□□□ -1.32
LSM3P3-201ENST00000436601 GIMD1P0DJR0 217 aa6.8□□□□□ -1.32
LSM3P3-201ENST00000436601 PRDX3P30048 256 aaKnown RBP6.8□□□□□ -1.32
LSM3P3-201ENST00000436601 DPP6P42658 865 aa6.8□□□□□ -1.32
LSM3P3-201ENST00000436601 PNLIPRP1P54315 467 aa6.8□□□□□ -1.32
LSM3P3-201ENST00000436601 HNRNPKP61978 463 aaKnown RBP eCLIP6.8□□□□□ -1.32
LSM3P3-201ENST00000436601 UBE2IP63279 158 aaKnown RBP6.8□□□□□ -1.32
LSM3P3-201ENST00000436601 TAP2Q03519 686 aa6.8□□□□□ -1.32
LSM3P3-201ENST00000436601 GALNT1Q10472 559 aaPredicted RBP6.8□□□□□ -1.32
LSM3P3-201ENST00000436601 BNIP3Q12983 259 aa6.8□□□□□ -1.32
LSM3P3-201ENST00000436601 GRIK2Q13002 908 aa6.8□□□□□ -1.32
LSM3P3-201ENST00000436601 LCP2Q13094 533 aa6.8□□□□□ -1.32
LSM3P3-201ENST00000436601 NAE1Q13564 534 aa6.8□□□□□ -1.32
LSM3P3-201ENST00000436601 GTF2H2Q13888 395 aa6.8□□□□□ -1.32
LSM3P3-201ENST00000436601 KRT33BQ14525 404 aa6.8□□□□□ -1.32
LSM3P3-201ENST00000436601 ARHGAP19Q14CB8 494 aa6.8□□□□□ -1.32
LSM3P3-201ENST00000436601 CYP2A13Q16696 494 aa6.8□□□□□ -1.32
LSM3P3-201ENST00000436601 DUOXA1Q1HG43 343 aa6.8□□□□□ -1.32
LSM3P3-201ENST00000436601 HLA-BQ31612 363 aa6.8□□□□□ -1.32
LSM3P3-201ENST00000436601 RNFT1Q5M7Z0 435 aa6.8□□□□□ -1.32
LSM3P3-201ENST00000436601 EXOSC6Q5RKV6 272 aaKnown RBP6.8□□□□□ -1.32
LSM3P3-201ENST00000436601 ZBTB37Q5TC79 503 aa6.8□□□□□ -1.32
LSM3P3-201ENST00000436601 PRAMEF9Q5VWM5 478 aa6.8□□□□□ -1.32
LSM3P3-201ENST00000436601 SLC6A19Q695T7 634 aa6.8□□□□□ -1.32
LSM3P3-201ENST00000436601 GTF2H2CQ6P1K8 395 aa6.8□□□□□ -1.32
LSM3P3-201ENST00000436601 SLC23A3Q6PIS1 610 aa6.8□□□□□ -1.32
LSM3P3-201ENST00000436601 OGFOD3Q6PK18 319 aa6.8□□□□□ -1.32
LSM3P3-201ENST00000436601 KANSL1Q7Z3B3 1105 aa6.8□□□□□ -1.32
LSM3P3-201ENST00000436601 GOLGA7Q7Z5G4 137 aa6.8□□□□□ -1.32
LSM3P3-201ENST00000436601 SYVN1Q86TM6 617 aa6.8□□□□□ -1.32
LSM3P3-201ENST00000436601 THOC6Q86W42 341 aaKnown RBP6.8□□□□□ -1.32
LSM3P3-201ENST00000436601 C17orf82Q86X59 251 aaPredicted RBP6.8□□□□□ -1.32
LSM3P3-201ENST00000436601 GKN2Q86XP6 184 aa6.8□□□□□ -1.32
LSM3P3-201ENST00000436601 MRPL41Q8IXM3 137 aaKnown RBP6.8□□□□□ -1.32
LSM3P3-201ENST00000436601 SFRP1Q8N474 314 aa6.8□□□□□ -1.32
LSM3P3-201ENST00000436601 C2orf73Q8N5S3 287 aaPredicted RBP6.8□□□□□ -1.32
LSM3P3-201ENST00000436601 TEX9Q8N6V9 391 aa6.8□□□□□ -1.32
LSM3P3-201ENST00000436601 ZNF781Q8N8C0 355 aa6.8□□□□□ -1.32
LSM3P3-201ENST00000436601 LINC01555Q8NAE3 123 aa6.8□□□□□ -1.32
LSM3P3-201ENST00000436601 FAM13CQ8NE31 585 aa6.8□□□□□ -1.32
LSM3P3-201ENST00000436601 OR52B6Q8NGF0 335 aa6.8□□□□□ -1.32
LSM3P3-201ENST00000436601 OR52E1Q8NGJ3 308 aa6.8□□□□□ -1.32
LSM3P3-201ENST00000436601 CEP76Q8TAP6 659 aa6.8□□□□□ -1.32
LSM3P3-201ENST00000436601 SLC37A2Q8TED4 501 aa6.8□□□□□ -1.32
LSM3P3-201ENST00000436601 TRPC4APQ8TEL6 797 aa6.8□□□□□ -1.32
LSM3P3-201ENST00000436601 PPP4R1Q8TF05 950 aa6.8□□□□□ -1.32
LSM3P3-201ENST00000436601 ATL1Q8WXF7 558 aa6.8□□□□□ -1.32
LSM3P3-201ENST00000436601 KLHL6Q8WZ60 621 aa6.8□□□□□ -1.32
LSM3P3-201ENST00000436601 CXorf40BQ96DE9 158 aa6.8□□□□□ -1.32
LSM3P3-201ENST00000436601 LOXL4Q96JB6 756 aa6.8□□□□□ -1.32
LSM3P3-201ENST00000436601 OR4K3Q96R72 315 aa6.8□□□□□ -1.32
LSM3P3-201ENST00000436601 CCT8L2Q96SF2 557 aa6.8□□□□□ -1.32
LSM3P3-201ENST00000436601 LRFN3Q9BTN0 628 aa6.8□□□□□ -1.32
LSM3P3-201ENST00000436601 TRMOQ9BU70 441 aa6.8□□□□□ -1.32
LSM3P3-201ENST00000436601 SGPP1Q9BX95 441 aa6.8□□□□□ -1.32
LSM3P3-201ENST00000436601 TWSG1Q9GZX9 223 aa6.8□□□□□ -1.32
LSM3P3-201ENST00000436601 SLC32A1Q9H598 525 aa6.8□□□□□ -1.32
LSM3P3-201ENST00000436601 XKR8Q9H6D3 395 aa6.8□□□□□ -1.32
LSM3P3-201ENST00000436601 KIR3DX1Q9H7L2 352 aa6.8□□□□□ -1.32
LSM3P3-201ENST00000436601 NOL11Q9H8H0 719 aaKnown RBP6.8□□□□□ -1.32
LSM3P3-201ENST00000436601 IPPKQ9H8X2 491 aa6.8□□□□□ -1.32
LSM3P3-201ENST00000436601 IL21RQ9HBE5 538 aa6.8□□□□□ -1.32
LSM3P3-201ENST00000436601 SLC40A1Q9NP59 571 aa6.8□□□□□ -1.32
LSM3P3-201ENST00000436601 SEMA4BQ9NPR2 832 aaPredicted RBP6.8□□□□□ -1.32
LSM3P3-201ENST00000436601 INTS7Q9NVH2 962 aaKnown RBP6.8□□□□□ -1.32
LSM3P3-201ENST00000436601 PSD3Q9NYI0 1048 aa6.8□□□□□ -1.32
LSM3P3-201ENST00000436601 CPNE7Q9UBL6 633 aa6.8□□□□□ -1.32
LSM3P3-201ENST00000436601 OPTCQ9UBM4 332 aa6.8□□□□□ -1.32
LSM3P3-201ENST00000436601 ZDHHC2Q9UIJ5 367 aa6.8□□□□□ -1.32
LSM3P3-201ENST00000436601 HAO1Q9UJM8 370 aa6.8□□□□□ -1.32
LSM3P3-201ENST00000436601 ZNF225Q9UK10 706 aa6.8□□□□□ -1.32
LSM3P3-201ENST00000436601 ICKQ9UPZ9 632 aa6.8□□□□□ -1.32
LSM3P3-201ENST00000436601 SLC22A14Q9Y267 594 aa6.8□□□□□ -1.32
LSM3P3-201ENST00000436601 RAP2CQ9Y3L5 183 aa6.8□□□□□ -1.32
LSM3P3-201ENST00000436601 HEBP2Q9Y5Z4 205 aa6.8□□□□□ -1.32
LSM3P3-201ENST00000436601 CSNK1G3Q9Y6M4 447 aa6.8□□□□□ -1.32
LSM3P3-201ENST00000436601 COLEC10Q9Y6Z7 277 aa6.8□□□□□ -1.32
LSM3P3-201ENST00000436601 KIR2DS5A0A0G2JLQ3 304 aa6.79□□□□□ -1.32
LSM3P3-201ENST00000436601 A0A0G2JNG1 304 aa6.79□□□□□ -1.32
LSM3P3-201ENST00000436601 A0A1B0GTQ1 180 aa6.79□□□□□ -1.32
LSM3P3-201ENST00000436601 A0A1W2PPV9 198 aa6.79□□□□□ -1.32
LSM3P3-201ENST00000436601 PABPN1LA6NDY0 278 aaKnown RBP6.79□□□□□ -1.32
LSM3P3-201ENST00000436601 OR5K4A6NMS3 321 aa6.79□□□□□ -1.32
LSM3P3-201ENST00000436601 B4DGG1 531 aa6.79□□□□□ -1.32
LSM3P3-201ENST00000436601 TMEM233B4DJY2 109 aa6.79□□□□□ -1.32
LSM3P3-201ENST00000436601 KIR2DS3K7RE56 304 aa6.79□□□□□ -1.32
LSM3P3-201ENST00000436601 AGRPO00253 132 aa6.79□□□□□ -1.32
LSM3P3-201ENST00000436601 ZNF195O14628 629 aa6.79□□□□□ -1.32
LSM3P3-201ENST00000436601 OIP5O43482 229 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms