RNA–Protein interactions for RNA: ENST00000435953.2

AC004448.3-201, humanhuman

TSL 2 BASIC

Gene AC004448.3, Length 543 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004448.3-201ENST00000435953 RSC1A1Q92681 617 aa9.52□□□□□ -0.89
AC004448.3-201ENST00000435953 ZUFSPQ96AP4 578 aa9.52□□□□□ -0.89
AC004448.3-201ENST00000435953 PTCD3Q96EY7 689 aaKnown RBP9.52□□□□□ -0.89
AC004448.3-201ENST00000435953 FAR2Q96K12 515 aa9.52□□□□□ -0.89
AC004448.3-201ENST00000435953 PRAP1Q96NZ9 151 aa9.52□□□□□ -0.89
AC004448.3-201ENST00000435953 EDEM2Q9BV94 578 aa9.52□□□□□ -0.89
AC004448.3-201ENST00000435953 ABCG4Q9H172 646 aa9.52□□□□□ -0.89
AC004448.3-201ENST00000435953 EPB41L1Q9H4G0 881 aa9.52□□□□□ -0.89
AC004448.3-201ENST00000435953 EHD1Q9H4M9 534 aa9.52□□□□□ -0.89
AC004448.3-201ENST00000435953 PELI2Q9HAT8 420 aa9.52□□□□□ -0.89
AC004448.3-201ENST00000435953 MRPS30Q9NP92 439 aaKnown RBP9.52□□□□□ -0.89
AC004448.3-201ENST00000435953 TMEM9BQ9NQ34 198 aa9.52□□□□□ -0.89
AC004448.3-201ENST00000435953 TMEM184CQ9NVA4 438 aa9.52□□□□□ -0.89
AC004448.3-201ENST00000435953 PSD3Q9NYI0 1048 aa9.52□□□□□ -0.89
AC004448.3-201ENST00000435953 VTI1BQ9UEU0 232 aa9.52□□□□□ -0.89
AC004448.3-201ENST00000435953 EPHA6Q9UF33 1036 aa9.52□□□□□ -0.89
AC004448.3-201ENST00000435953 TRPS1Q9UHF7 1281 aa9.52□□□□□ -0.89
AC004448.3-201ENST00000435953 ZNF490Q9ULM2 529 aaPredicted RBP9.52□□□□□ -0.89
AC004448.3-201ENST00000435953 SNX7Q9UNH6 387 aa9.52□□□□□ -0.89
AC004448.3-201ENST00000435953 SH2B3Q9UQQ2 575 aa9.52□□□□□ -0.89
AC004448.3-201ENST00000435953 BTBD3Q9Y2F9 522 aa9.52□□□□□ -0.89
AC004448.3-201ENST00000435953 TIMM22Q9Y584 194 aa9.52□□□□□ -0.89
AC004448.3-201ENST00000435953 KCNE1BA0A087WTH5 132 aa9.51□□□□□ -0.89
AC004448.3-201ENST00000435953 IGKV1-8A0A0C4DH67 115 aa9.51□□□□□ -0.89
AC004448.3-201ENST00000435953 C4orf47A7E2U8 309 aa9.51□□□□□ -0.89
AC004448.3-201ENST00000435953 TMEM233B4DJY2 109 aa9.51□□□□□ -0.89
AC004448.3-201ENST00000435953 H0YIV9 168 aa9.51□□□□□ -0.89
AC004448.3-201ENST00000435953 ZNF195O14628 629 aa9.51□□□□□ -0.89
AC004448.3-201ENST00000435953 HDAC3O15379 428 aa9.51□□□□□ -0.89
AC004448.3-201ENST00000435953 FLRT2O43155 660 aa9.51□□□□□ -0.89
AC004448.3-201ENST00000435953 TROVE2P10155 538 aaKnown RBP eCLIP9.51□□□□□ -0.89
AC004448.3-201ENST00000435953 JUPP14923 745 aa9.51□□□□□ -0.89
AC004448.3-201ENST00000435953 CKMT2P17540 419 aa9.51□□□□□ -0.89
AC004448.3-201ENST00000435953 CD22P20273 847 aa9.51□□□□□ -0.89
AC004448.3-201ENST00000435953 CXCR2P25025 360 aa9.51□□□□□ -0.89
AC004448.3-201ENST00000435953 GRIA3P42263 894 aa9.51□□□□□ -0.89
AC004448.3-201ENST00000435953 CAPZBP47756 277 aa9.51□□□□□ -0.89
AC004448.3-201ENST00000435953 FOXA1P55317 472 aa9.51□□□□□ -0.89
AC004448.3-201ENST00000435953 CSNK1G2P78368 415 aa9.51□□□□□ -0.89
AC004448.3-201ENST00000435953 GPLD1P80108 840 aa9.51□□□□□ -0.89
AC004448.3-201ENST00000435953 ZRSR2Q15696 482 aaKnown RBP9.51□□□□□ -0.89
AC004448.3-201ENST00000435953 CPSF6Q16630 551 aaKnown RBP eCLIP9.51□□□□□ -0.89
AC004448.3-201ENST00000435953 HIST2H2ACQ16777 129 aaPredicted RBP9.51□□□□□ -0.89
AC004448.3-201ENST00000435953 SLC5A12Q1EHB4 618 aa9.51□□□□□ -0.89
AC004448.3-201ENST00000435953 AMZ1Q400G9 498 aa9.51□□□□□ -0.89
AC004448.3-201ENST00000435953 GGTA1PQ4G0N0 100 aa9.51□□□□□ -0.89
AC004448.3-201ENST00000435953 PAGE2BQ5JRK9 111 aa9.51□□□□□ -0.89
AC004448.3-201ENST00000435953 KIAA1614Q5VZ46 1190 aa9.51□□□□□ -0.89
AC004448.3-201ENST00000435953 KANK2Q63ZY3 851 aa9.51□□□□□ -0.89
AC004448.3-201ENST00000435953 CLEC6AQ6EIG7 209 aa9.51□□□□□ -0.89
AC004448.3-201ENST00000435953 HIST2H2AA3Q6FI13 130 aa9.51□□□□□ -0.89
AC004448.3-201ENST00000435953 CGB2Q6NT52 195 aa9.51□□□□□ -0.89
AC004448.3-201ENST00000435953 FBXO42Q6P3S6 717 aa9.51□□□□□ -0.89
AC004448.3-201ENST00000435953 GUSBP11Q6P575 273 aa9.51□□□□□ -0.89
AC004448.3-201ENST00000435953 SPESP1Q6UW49 350 aa9.51□□□□□ -0.89
AC004448.3-201ENST00000435953 PRR23CQ6ZRP0 262 aa9.51□□□□□ -0.89
AC004448.3-201ENST00000435953 USP53Q70EK8 1073 aa9.51□□□□□ -0.89
AC004448.3-201ENST00000435953 EFL1Q7Z2Z2 1120 aaKnown RBP9.51□□□□□ -0.89
AC004448.3-201ENST00000435953 PIGWQ7Z7B1 504 aa9.51□□□□□ -0.89
AC004448.3-201ENST00000435953 FAM129CQ86XR2 697 aa9.51□□□□□ -0.89
AC004448.3-201ENST00000435953 MYLK4Q86YV6 388 aaPredicted RBP9.51□□□□□ -0.89
AC004448.3-201ENST00000435953 AFAP1L2Q8N4X5 818 aa9.51□□□□□ -0.89
AC004448.3-201ENST00000435953 NAT6Q93015 286 aa9.51□□□□□ -0.89
AC004448.3-201ENST00000435953 CCDC74AQ96AQ1 378 aa9.51□□□□□ -0.89
AC004448.3-201ENST00000435953 ZDHHC12Q96GR4 267 aa9.51□□□□□ -0.89
AC004448.3-201ENST00000435953 AHCYL2Q96HN2 611 aaKnown RBP9.51□□□□□ -0.89
AC004448.3-201ENST00000435953 CNDP2Q96KP4 475 aaKnown RBP9.51□□□□□ -0.89
AC004448.3-201ENST00000435953 KCNA7Q96RP8 456 aa9.51□□□□□ -0.89
AC004448.3-201ENST00000435953 ELAC2Q9BQ52 826 aaKnown RBP9.51□□□□□ -0.89
AC004448.3-201ENST00000435953 DPH7Q9BTV6 452 aa9.51□□□□□ -0.89
AC004448.3-201ENST00000435953 EFCAB11Q9BUY7 163 aa9.51□□□□□ -0.89
AC004448.3-201ENST00000435953 TRIM55Q9BYV6 548 aa9.51□□□□□ -0.89
AC004448.3-201ENST00000435953 SLC29A3Q9BZD2 475 aa9.51□□□□□ -0.89
AC004448.3-201ENST00000435953 RAB33BQ9H082 229 aa9.51□□□□□ -0.89
AC004448.3-201ENST00000435953 FAM107BQ9H098 131 aa9.51□□□□□ -0.89
AC004448.3-201ENST00000435953 RABEP2Q9H5N1 569 aa9.51□□□□□ -0.89
AC004448.3-201ENST00000435953 NT5DC2Q9H857 520 aa9.51□□□□□ -0.89
AC004448.3-201ENST00000435953 KCNK13Q9HB14 408 aa9.51□□□□□ -0.89
AC004448.3-201ENST00000435953 EVA1BQ9NVM1 165 aa9.51□□□□□ -0.89
AC004448.3-201ENST00000435953 CUEDC1Q9NWM3 386 aaPredicted RBP9.51□□□□□ -0.89
AC004448.3-201ENST00000435953 GEMIN8Q9NWZ8 242 aaKnown RBP9.51□□□□□ -0.89
AC004448.3-201ENST00000435953 MARCOQ9UEW3 520 aaPredicted RBP9.51□□□□□ -0.89
AC004448.3-201ENST00000435953 KLK4Q9Y5K2 254 aa9.51□□□□□ -0.89
AC004448.3-201ENST00000435953 DNAJC15Q9Y5T4 150 aa9.51□□□□□ -0.89
AC004448.3-201ENST00000435953 USH1CQ9Y6N9 552 aa9.51□□□□□ -0.89
AC004448.3-201ENST00000435953 CACNA1EQ15878 2313 aa9.51□□□□□ -0.89
AC004448.3-201ENST00000435953 CEP192Q8TEP8 1941 aa9.5□□□□□ -0.89
AC004448.3-201ENST00000435953 A0A0J9YY10 115 aa9.5□□□□□ -0.89
AC004448.3-201ENST00000435953 MANBAO00462 879 aa9.5□□□□□ -0.89
AC004448.3-201ENST00000435953 FFAR3O14843 346 aa9.5□□□□□ -0.89
AC004448.3-201ENST00000435953 HGSO14964 777 aaPredicted RBP9.5□□□□□ -0.89
AC004448.3-201ENST00000435953 CAPN5O15484 640 aaPredicted RBP9.5□□□□□ -0.89
AC004448.3-201ENST00000435953 GPR42O15529 346 aa9.5□□□□□ -0.89
AC004448.3-201ENST00000435953 SH3BP5O60239 455 aa9.5□□□□□ -0.89
AC004448.3-201ENST00000435953 LCMT2O60294 686 aaKnown RBP9.5□□□□□ -0.89
AC004448.3-201ENST00000435953 ULK1O75385 1050 aa9.5□□□□□ -0.89
AC004448.3-201ENST00000435953 FAM107AO95990 144 aa9.5□□□□□ -0.89
AC004448.3-201ENST00000435953 CHEK2O96017 543 aa9.5□□□□□ -0.89
AC004448.3-201ENST00000435953 KRT6AP02538 564 aa9.5□□□□□ -0.89
AC004448.3-201ENST00000435953 KRT6BP04259 564 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms